RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 C10orf62Q5T681 223 aaPredicted RBP9.25□□□□□ -0.93
NIF3L1-202ENST00000409020 SHEQ5VZ18 495 aa9.25□□□□□ -0.93
NIF3L1-202ENST00000409020 CRYBG3Q68DQ2 2970 aa9.25□□□□□ -0.93
NIF3L1-202ENST00000409020 ZNF470Q6ECI4 717 aa9.25□□□□□ -0.93
NIF3L1-202ENST00000409020 ZNF549Q6P9A3 640 aa9.25□□□□□ -0.93
NIF3L1-202ENST00000409020 ADAMTSL2Q86TH1 951 aa9.25□□□□□ -0.93
NIF3L1-202ENST00000409020 SYVN1Q86TM6 617 aa9.25□□□□□ -0.93
NIF3L1-202ENST00000409020 ZBTB2Q8N680 514 aa9.25□□□□□ -0.93
NIF3L1-202ENST00000409020 NAT8LQ8N9F0 302 aa9.25□□□□□ -0.93
NIF3L1-202ENST00000409020 GALNT11Q8NCW6 608 aa9.25□□□□□ -0.93
NIF3L1-202ENST00000409020 SGK3Q96BR1 496 aa9.25□□□□□ -0.93
NIF3L1-202ENST00000409020 REXO5Q96IC2 774 aaKnown RBP9.25□□□□□ -0.93
NIF3L1-202ENST00000409020 COQ7Q99807 217 aa9.25□□□□□ -0.93
NIF3L1-202ENST00000409020 TSSK1BQ9BXA7 367 aa9.25□□□□□ -0.93
NIF3L1-202ENST00000409020 NLNQ9BYT8 704 aa9.25□□□□□ -0.93
NIF3L1-202ENST00000409020 SLC22A11Q9NSA0 550 aa9.25□□□□□ -0.93
NIF3L1-202ENST00000409020 KIF17Q9P2E2 1029 aa9.25□□□□□ -0.93
NIF3L1-202ENST00000409020 MBD2Q9UBB5 411 aa9.25□□□□□ -0.93
NIF3L1-202ENST00000409020 SERTAD3Q9UJW9 196 aa9.25□□□□□ -0.93
NIF3L1-202ENST00000409020 SNX12Q9UMY4 172 aa9.25□□□□□ -0.93
NIF3L1-202ENST00000409020 MED13Q9UHV7 2174 aa9.25□□□□□ -0.93
NIF3L1-202ENST00000409020 TNRC6AQ8NDV7 1962 aaKnown RBP9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 RP1L1Q8IWN7 2480 aaPredicted RBP9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 A0A1W2PPV9 198 aa9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 ZSCAN5BA6NJL1 495 aa9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 POM121CA8CG34 1229 aa9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 HDAC3O15379 428 aa9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 CTSVO60911 334 aa9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 PHF2O75151 1096 aa9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 RSL1D1O76021 490 aaKnown RBP9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 MED26O95402 600 aa9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 S1PR4O95977 384 aa9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 KLK3P07288 261 aaPredicted RBP9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 ALOX5P09917 674 aa9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 RAB40ALP0C0E4 278 aa9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 ZNF3P17036 446 aa9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 PTGS2P35354 604 aa9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 SLC1A2P43004 574 aa9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 RPL5P46777 297 aaKnown RBP9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 RASSF2P50749 326 aa9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 CCL11P51671 97 aa9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 CLCN7P51798 805 aa9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 P2RX3P56373 397 aa9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 GNG2P59768 71 aa9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 BPIFB3P59826 476 aa9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 SSTP61278 116 aa9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 MPP1Q00013 466 aa9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 RAPSNQ13702 412 aa9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 ATP1A4Q13733 1029 aa9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 DHX34Q14147 1143 aaKnown RBP9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 TMED2Q15363 201 aa9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 SF1Q15637 639 aaKnown RBP9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 RGS21Q2M5E4 152 aa9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 MSS51Q4VC12 460 aa9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 CLVS2Q5SYC1 327 aa9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 MLIPQ5VWP3 458 aa9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 MRNIPQ6NTE8 343 aa9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 LRRC74BQ6ZQY2 392 aa9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 DCDC5Q6ZRR9 648 aa9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 USP43Q70EL4 1123 aa9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 ERI1Q8IV48 349 aaKnown RBP9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 METTL27Q8N6F8 245 aaPredicted RBP9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 C7orf57Q8NEG2 295 aa9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 OR2L8Q8NGY9 312 aa9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 ACTRT1Q8TDG2 376 aa9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 CHPT1Q8WUD6 406 aa9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 PWWP2AQ96N64 755 aa9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 MIPEPQ99797 713 aa9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 DDX47Q9H0S4 455 aaKnown RBP9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 SYTL2Q9HCH5 934 aa9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 TAS2R7Q9NYW3 318 aa9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 STOX2Q9P2F5 926 aaPredicted RBP9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 SLC17A6Q9P2U8 582 aa9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 TMEM5Q9Y2B1 443 aa9.24□□□□□ -0.93
NIF3L1-202ENST00000409020 SPTAN1Q13813 2472 aaKnown RBP9.23□□□□□ -0.93
NIF3L1-202ENST00000409020 FAM237BA0A1B0GVD1 139 aa9.23□□□□□ -0.93
NIF3L1-202ENST00000409020 A6NL46 340 aa9.23□□□□□ -0.93
NIF3L1-202ENST00000409020 ARHGEF33A8MVX0 844 aa9.23□□□□□ -0.93
NIF3L1-202ENST00000409020 MKRN2OSH3BPM6 223 aa9.23□□□□□ -0.93
NIF3L1-202ENST00000409020 BET1O15155 118 aa9.23□□□□□ -0.93
NIF3L1-202ENST00000409020 GMNNO75496 209 aa9.23□□□□□ -0.93
NIF3L1-202ENST00000409020 UNC5CO95185 931 aa9.23□□□□□ -0.93
NIF3L1-202ENST00000409020 MATN4O95460 622 aa9.23□□□□□ -0.93
NIF3L1-202ENST00000409020 RECKO95980 971 aa9.23□□□□□ -0.93
NIF3L1-202ENST00000409020 ESRRAP11474 423 aaPredicted RBP9.23□□□□□ -0.93
NIF3L1-202ENST00000409020 CHRM3P20309 590 aa9.23□□□□□ -0.93
NIF3L1-202ENST00000409020 TCEA1P23193 301 aaKnown RBP9.23□□□□□ -0.93
NIF3L1-202ENST00000409020 OTX2P32243 289 aa9.23□□□□□ -0.93
NIF3L1-202ENST00000409020 HPDP32754 393 aaPredicted RBP9.23□□□□□ -0.93
NIF3L1-202ENST00000409020 CSRP3P50461 194 aa9.23□□□□□ -0.93
NIF3L1-202ENST00000409020 PGGT1BP53609 377 aa9.23□□□□□ -0.93
NIF3L1-202ENST00000409020 MLLT10P55197 1068 aa9.23□□□□□ -0.93
NIF3L1-202ENST00000409020 HSD17B7P56937 341 aa9.23□□□□□ -0.93
NIF3L1-202ENST00000409020 NPTX1Q15818 432 aa9.23□□□□□ -0.93
NIF3L1-202ENST00000409020 FRMPD2BQ6IN97 320 aa9.23□□□□□ -0.93
NIF3L1-202ENST00000409020 RHBDD2Q6NTF9 364 aa9.23□□□□□ -0.93
NIF3L1-202ENST00000409020 ASB18Q6ZVZ8 466 aa9.23□□□□□ -0.93
NIF3L1-202ENST00000409020 GPR141Q7Z602 305 aa9.23□□□□□ -0.93
NIF3L1-202ENST00000409020 LRRC6Q86X45 466 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 342.3 ms