RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 ALAS2P22557 587 aa10.04□□□□□ -0.8
RPAIN-204ENST00000405578 GRK2P25098 689 aa10.04□□□□□ -0.8
RPAIN-204ENST00000405578 ETV4P43268 484 aa10.04□□□□□ -0.8
RPAIN-204ENST00000405578 GABRA4P48169 554 aa10.04□□□□□ -0.8
RPAIN-204ENST00000405578 KRT6CP48668 564 aa10.04□□□□□ -0.8
RPAIN-204ENST00000405578 STXBP1P61764 594 aaKnown RBP10.04□□□□□ -0.8
RPAIN-204ENST00000405578 CDC20Q12834 499 aa10.04□□□□□ -0.8
RPAIN-204ENST00000405578 E2F2Q14209 437 aa10.04□□□□□ -0.8
RPAIN-204ENST00000405578 CPSF6Q16630 551 aaKnown RBP eCLIP10.04□□□□□ -0.8
RPAIN-204ENST00000405578 GGTA1PQ4G0N0 100 aa10.04□□□□□ -0.8
RPAIN-204ENST00000405578 FRMPD2BQ6IN97 320 aa10.04□□□□□ -0.8
RPAIN-204ENST00000405578 C6orf15Q6UXA7 325 aaPredicted RBP10.04□□□□□ -0.8
RPAIN-204ENST00000405578 FRMD7Q6ZUT3 714 aa10.04□□□□□ -0.8
RPAIN-204ENST00000405578 ABHD13Q7L211 337 aa10.04□□□□□ -0.8
RPAIN-204ENST00000405578 KIRREL3Q8IZU9 778 aa10.04□□□□□ -0.8
RPAIN-204ENST00000405578 OR4N4Q8N0Y3 316 aa10.04□□□□□ -0.8
RPAIN-204ENST00000405578 ESX1Q8N693 406 aa10.04□□□□□ -0.8
RPAIN-204ENST00000405578 ARFGAP2Q8N6H7 521 aa10.04□□□□□ -0.8
RPAIN-204ENST00000405578 ZNF740Q8NDX6 193 aa10.04□□□□□ -0.8
RPAIN-204ENST00000405578 OR52B6Q8NGF0 335 aa10.04□□□□□ -0.8
RPAIN-204ENST00000405578 PROKR1Q8TCW9 393 aa10.04□□□□□ -0.8
RPAIN-204ENST00000405578 MGARPQ8TDB4 240 aa10.04□□□□□ -0.8
RPAIN-204ENST00000405578 CCT6BQ92526 530 aa10.04□□□□□ -0.8
RPAIN-204ENST00000405578 ZNF285Q96NJ3 590 aa10.04□□□□□ -0.8
RPAIN-204ENST00000405578 NSUN5Q96P11 429 aaKnown RBP10.04□□□□□ -0.8
RPAIN-204ENST00000405578 C17orf62Q9BQA9 187 aa10.04□□□□□ -0.8
RPAIN-204ENST00000405578 DPH2Q9BQC3 489 aaPredicted RBP10.04□□□□□ -0.8
RPAIN-204ENST00000405578 ENAMQ9NRM1 1142 aa10.04□□□□□ -0.8
RPAIN-204ENST00000405578 NMRK1Q9NWW6 199 aa10.04□□□□□ -0.8
RPAIN-204ENST00000405578 NDOR1Q9UHB4 597 aa10.04□□□□□ -0.8
RPAIN-204ENST00000405578 TRPS1Q9UHF7 1281 aa10.04□□□□□ -0.8
RPAIN-204ENST00000405578 SNX6Q9UNH7 406 aa10.04□□□□□ -0.8
RPAIN-204ENST00000405578 A0A1B0GX78 115 aa10.03□□□□□ -0.8
RPAIN-204ENST00000405578 WDR91A4D1P6 747 aa10.03□□□□□ -0.8
RPAIN-204ENST00000405578 LCMT2O60294 686 aaKnown RBP10.03□□□□□ -0.8
RPAIN-204ENST00000405578 NRP2O60462 931 aa10.03□□□□□ -0.8
RPAIN-204ENST00000405578 SEMA7AO75326 666 aa10.03□□□□□ -0.8
RPAIN-204ENST00000405578 VPS4BO75351 444 aa10.03□□□□□ -0.8
RPAIN-204ENST00000405578 ESRRBO95718 433 aa10.03□□□□□ -0.8
RPAIN-204ENST00000405578 CHEK2O96017 543 aa10.03□□□□□ -0.8
RPAIN-204ENST00000405578 SERPINE1P05121 402 aa10.03□□□□□ -0.8
RPAIN-204ENST00000405578 ENO1P06733 434 aaKnown RBP10.03□□□□□ -0.8
RPAIN-204ENST00000405578 TSPAN8P19075 237 aa10.03□□□□□ -0.8
RPAIN-204ENST00000405578 HMOX2P30519 316 aa10.03□□□□□ -0.8
RPAIN-204ENST00000405578 DCTP40126 519 aa10.03□□□□□ -0.8
RPAIN-204ENST00000405578 PIK3CBP42338 1070 aa10.03□□□□□ -0.8
RPAIN-204ENST00000405578 AVPR1BP47901 424 aa10.03□□□□□ -0.8
RPAIN-204ENST00000405578 PPP2R2AP63151 447 aa10.03□□□□□ -0.8
RPAIN-204ENST00000405578 MAP7Q14244 749 aa10.03□□□□□ -0.8
RPAIN-204ENST00000405578 HERC3Q15034 1050 aa10.03□□□□□ -0.8
RPAIN-204ENST00000405578 ZRSR2Q15696 482 aaKnown RBP10.03□□□□□ -0.8
RPAIN-204ENST00000405578 PRTGQ2VWP7 1150 aa10.03□□□□□ -0.8
RPAIN-204ENST00000405578 DEFB109BQ30KR1 87 aa10.03□□□□□ -0.8
RPAIN-204ENST00000405578 TTMPQ5BVD1 217 aa10.03□□□□□ -0.8
RPAIN-204ENST00000405578 FRG2Q64ET8 278 aa10.03□□□□□ -0.8
RPAIN-204ENST00000405578 ATG16L1Q676U5 607 aa10.03□□□□□ -0.8
RPAIN-204ENST00000405578 RHBDD2Q6NTF9 364 aa10.03□□□□□ -0.8
RPAIN-204ENST00000405578 PRMT9Q6P2P2 845 aa10.03□□□□□ -0.8
RPAIN-204ENST00000405578 TTLL10Q6ZVT0 673 aa10.03□□□□□ -0.8
RPAIN-204ENST00000405578 CHSY3Q70JA7 882 aa10.03□□□□□ -0.8
RPAIN-204ENST00000405578 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.03□□□□□ -0.8
RPAIN-204ENST00000405578 LAS2Q8IYD9 372 aa10.03□□□□□ -0.8
RPAIN-204ENST00000405578 CACNA2D3Q8IZS8 1091 aa10.03□□□□□ -0.8
RPAIN-204ENST00000405578 NLGN4XQ8N0W4 816 aa10.03□□□□□ -0.8
RPAIN-204ENST00000405578 TEX19Q8NA77 164 aa10.03□□□□□ -0.8
RPAIN-204ENST00000405578 SRFBP1Q8NEF9 429 aaKnown RBP10.03□□□□□ -0.8
RPAIN-204ENST00000405578 NLGN4YQ8NFZ3 816 aaPredicted RBP10.03□□□□□ -0.8
RPAIN-204ENST00000405578 OR7G3Q8NG95 312 aa10.03□□□□□ -0.8
RPAIN-204ENST00000405578 OR4F6Q8NGB9 312 aa10.03□□□□□ -0.8
RPAIN-204ENST00000405578 METTL6Q8TCB7 284 aa10.03□□□□□ -0.8
RPAIN-204ENST00000405578 NT5CQ8TCD5 201 aa10.03□□□□□ -0.8
RPAIN-204ENST00000405578 DYDC1Q8WWB3 177 aa10.03□□□□□ -0.8
RPAIN-204ENST00000405578 MVB12AQ96EY5 273 aa10.03□□□□□ -0.8
RPAIN-204ENST00000405578 LRFN5Q96NI6 719 aa10.03□□□□□ -0.8
RPAIN-204ENST00000405578 CDK15Q96Q40 435 aa10.03□□□□□ -0.8
RPAIN-204ENST00000405578 FRG2BQ96QU4 278 aa10.03□□□□□ -0.8
RPAIN-204ENST00000405578 MECRQ9BV79 373 aa10.03□□□□□ -0.8
RPAIN-204ENST00000405578 GATA5Q9BWX5 397 aaPredicted RBP10.03□□□□□ -0.8
RPAIN-204ENST00000405578 SLC29A3Q9BZD2 475 aa10.03□□□□□ -0.8
RPAIN-204ENST00000405578 RHBGQ9H310 441 aa10.03□□□□□ -0.8
RPAIN-204ENST00000405578 GSTO2Q9H4Y5 243 aa10.03□□□□□ -0.8
RPAIN-204ENST00000405578 ZBTB26Q9HCK0 441 aa10.03□□□□□ -0.8
RPAIN-204ENST00000405578 MID1IP1Q9NPA3 183 aa10.03□□□□□ -0.8
RPAIN-204ENST00000405578 CUTCQ9NTM9 273 aa10.03□□□□□ -0.8
RPAIN-204ENST00000405578 PADI1Q9ULC6 663 aa10.03□□□□□ -0.8
RPAIN-204ENST00000405578 VPS4AQ9UN37 437 aa10.03□□□□□ -0.8
RPAIN-204ENST00000405578 RNF11Q9Y3C5 154 aa10.03□□□□□ -0.8
RPAIN-204ENST00000405578 TMEM184BQ9Y519 407 aaPredicted RBP10.03□□□□□ -0.8
RPAIN-204ENST00000405578 F8P00451 2351 aa10.02□□□□□ -0.8
RPAIN-204ENST00000405578 TMEM114B3SHH9 223 aa10.02□□□□□ -0.81
RPAIN-204ENST00000405578 C9J4A7 227 aa10.02□□□□□ -0.81
RPAIN-204ENST00000405578 DSCR3O14972 297 aa10.02□□□□□ -0.81
RPAIN-204ENST00000405578 HCRTR1O43613 425 aa10.02□□□□□ -0.81
RPAIN-204ENST00000405578 RAD1O60671 282 aa10.02□□□□□ -0.81
RPAIN-204ENST00000405578 ULK1O75385 1050 aa10.02□□□□□ -0.81
RPAIN-204ENST00000405578 HSPA4LO95757 839 aa10.02□□□□□ -0.81
RPAIN-204ENST00000405578 CD63P08962 238 aa10.02□□□□□ -0.81
RPAIN-204ENST00000405578 DHRS4L1P0CG22 281 aa10.02□□□□□ -0.81
RPAIN-204ENST00000405578 PTX3P26022 381 aaPredicted RBP10.02□□□□□ -0.81
RPAIN-204ENST00000405578 ELAVL4P26378 380 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms