RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 VPS9D1Q9Y2B5 631 aa11.07□□□□□ -0.64
SPTLC1P3-201ENST00000403408 SLC22A7Q9Y694 548 aa11.07□□□□□ -0.64
SPTLC1P3-201ENST00000403408 NINQ8N4C6 2090 aa11.07□□□□□ -0.64
SPTLC1P3-201ENST00000403408 TRBV11-1A0A0K0K1C0 115 aa11.06□□□□□ -0.64
SPTLC1P3-201ENST00000403408 A0A1W2PPR1 153 aa11.06□□□□□ -0.64
SPTLC1P3-201ENST00000403408 AKR1B15C9JRZ8 316 aaPredicted RBP11.06□□□□□ -0.64
SPTLC1P3-201ENST00000403408 GOLGA6L22H0YM25 854 aa11.06□□□□□ -0.64
SPTLC1P3-201ENST00000403408 ZNF354AO60765 605 aaPredicted RBP11.06□□□□□ -0.64
SPTLC1P3-201ENST00000403408 ITGA10O75578 1167 aa11.06□□□□□ -0.64
SPTLC1P3-201ENST00000403408 SYF2O95926 243 aaKnown RBP11.06□□□□□ -0.64
SPTLC1P3-201ENST00000403408 IGHG3P01860 377 aa11.06□□□□□ -0.64
SPTLC1P3-201ENST00000403408 INHBBP09529 407 aa11.06□□□□□ -0.64
SPTLC1P3-201ENST00000403408 ENDOUP21128 410 aaKnown RBP11.06□□□□□ -0.64
SPTLC1P3-201ENST00000403408 HSD17B2P37059 387 aa11.06□□□□□ -0.64
SPTLC1P3-201ENST00000403408 FDFT1P37268 417 aa11.06□□□□□ -0.64
SPTLC1P3-201ENST00000403408 ZFP36L2P47974 494 aaKnown RBP11.06□□□□□ -0.64
SPTLC1P3-201ENST00000403408 DGKQP52824 942 aa11.06□□□□□ -0.64
SPTLC1P3-201ENST00000403408 PPIAP62937 165 aaKnown RBP11.06□□□□□ -0.64
SPTLC1P3-201ENST00000403408 MEF2AQ02078 507 aaPredicted RBP11.06□□□□□ -0.64
SPTLC1P3-201ENST00000403408 DEFB113Q30KQ7 82 aa11.06□□□□□ -0.64
SPTLC1P3-201ENST00000403408 DEFB134Q4QY38 66 aa11.06□□□□□ -0.64
SPTLC1P3-201ENST00000403408 THEMIS2Q5TEJ8 643 aa11.06□□□□□ -0.64
SPTLC1P3-201ENST00000403408 CAPN13Q6MZZ7 669 aaPredicted RBP11.06□□□□□ -0.64
SPTLC1P3-201ENST00000403408 CLEC9AQ6UXN8 241 aa11.06□□□□□ -0.64
SPTLC1P3-201ENST00000403408 KIAA0408Q6ZU52 694 aa11.06□□□□□ -0.64
SPTLC1P3-201ENST00000403408 CIARTQ8N365 385 aaPredicted RBP11.06□□□□□ -0.64
SPTLC1P3-201ENST00000403408 PRELID2Q8N945 189 aa11.06□□□□□ -0.64
SPTLC1P3-201ENST00000403408 MFSD9Q8NBP5 474 aa11.06□□□□□ -0.64
SPTLC1P3-201ENST00000403408 RELL2Q8NC24 303 aaPredicted RBP11.06□□□□□ -0.64
SPTLC1P3-201ENST00000403408 CAMKVQ8NCB2 501 aa11.06□□□□□ -0.64
SPTLC1P3-201ENST00000403408 OR2M7Q8NG81 312 aa11.06□□□□□ -0.64
SPTLC1P3-201ENST00000403408 MCOLN3Q8TDD5 553 aa11.06□□□□□ -0.64
SPTLC1P3-201ENST00000403408 SREK1Q8WXA9 508 aaKnown RBP11.06□□□□□ -0.64
SPTLC1P3-201ENST00000403408 EBNA1BP2Q99848 306 aaKnown RBP11.06□□□□□ -0.64
SPTLC1P3-201ENST00000403408 DEFB126Q9BYW3 111 aa11.06□□□□□ -0.64
SPTLC1P3-201ENST00000403408 SPNS1Q9H2V7 528 aa11.06□□□□□ -0.64
SPTLC1P3-201ENST00000403408 FAM114A2Q9NRY5 505 aa11.06□□□□□ -0.64
SPTLC1P3-201ENST00000403408 UTP6Q9NYH9 597 aaKnown RBP11.06□□□□□ -0.64
SPTLC1P3-201ENST00000403408 KCMF1Q9P0J7 381 aa11.06□□□□□ -0.64
SPTLC1P3-201ENST00000403408 ADAMTS6Q9UKP5 1117 aa11.06□□□□□ -0.64
SPTLC1P3-201ENST00000403408 A0A1B0GVC2 190 aa11.05□□□□□ -0.64
SPTLC1P3-201ENST00000403408 LIASO43766 372 aa11.05□□□□□ -0.64
SPTLC1P3-201ENST00000403408 OR6B1O95007 311 aa11.05□□□□□ -0.64
SPTLC1P3-201ENST00000403408 LY6G6DO95868 133 aa11.05□□□□□ -0.64
SPTLC1P3-201ENST00000403408 IFNB1P01574 187 aa11.05□□□□□ -0.64
SPTLC1P3-201ENST00000403408 ESR1P03372 595 aa11.05□□□□□ -0.64
SPTLC1P3-201ENST00000403408 APRTP07741 180 aa11.05□□□□□ -0.64
SPTLC1P3-201ENST00000403408 CDH1P12830 882 aa11.05□□□□□ -0.64
SPTLC1P3-201ENST00000403408 MGAT1P26572 445 aa11.05□□□□□ -0.64
SPTLC1P3-201ENST00000403408 RPL22P35268 128 aaKnown RBP11.05□□□□□ -0.64
SPTLC1P3-201ENST00000403408 KIR2DL3P43628 341 aa11.05□□□□□ -0.64
SPTLC1P3-201ENST00000403408 ADARP55265 1226 aaKnown RBP11.05□□□□□ -0.64
SPTLC1P3-201ENST00000403408 TIAL1Q01085 375 aaKnown RBP eCLIP11.05□□□□□ -0.64
SPTLC1P3-201ENST00000403408 POMZP3Q6PJE2 187 aa11.05□□□□□ -0.64
SPTLC1P3-201ENST00000403408 B3GNT6Q6ZMB0 384 aa11.05□□□□□ -0.64
SPTLC1P3-201ENST00000403408 QSOX2Q6ZRP7 698 aa11.05□□□□□ -0.64
SPTLC1P3-201ENST00000403408 CHSY3Q70JA7 882 aa11.05□□□□□ -0.64
SPTLC1P3-201ENST00000403408 TRILQ7L0X0 811 aa11.05□□□□□ -0.64
SPTLC1P3-201ENST00000403408 PIWIL4Q7Z3Z4 852 aaKnown RBP11.05□□□□□ -0.64
SPTLC1P3-201ENST00000403408 TMEM251Q8N6I4 163 aa11.05□□□□□ -0.64
SPTLC1P3-201ENST00000403408 NAXEQ8NCW5 288 aa11.05□□□□□ -0.64
SPTLC1P3-201ENST00000403408 PSD4Q8NDX1 1056 aa11.05□□□□□ -0.64
SPTLC1P3-201ENST00000403408 C1orf54Q8WWF1 131 aa11.05□□□□□ -0.64
SPTLC1P3-201ENST00000403408 THAP11Q96EK4 314 aa11.05□□□□□ -0.64
SPTLC1P3-201ENST00000403408 SMC6Q96SB8 1091 aa11.05□□□□□ -0.64
SPTLC1P3-201ENST00000403408 SH3GL2Q99962 352 aa11.05□□□□□ -0.64
SPTLC1P3-201ENST00000403408 KIFC1Q9BW19 673 aa11.05□□□□□ -0.64
SPTLC1P3-201ENST00000403408 TTTY12Q9BZ98 90 aa11.05□□□□□ -0.64
SPTLC1P3-201ENST00000403408 SLC6A16Q9GZN6 736 aa11.05□□□□□ -0.64
SPTLC1P3-201ENST00000403408 PLEKHF2Q9H8W4 249 aa11.05□□□□□ -0.64
SPTLC1P3-201ENST00000403408 SEMA4BQ9NPR2 832 aaPredicted RBP11.05□□□□□ -0.64
SPTLC1P3-201ENST00000403408 SYBUQ9NX95 663 aa11.05□□□□□ -0.64
SPTLC1P3-201ENST00000403408 TCRBV7S3A2A0A539 114 aa11.04□□□□□ -0.64
SPTLC1P3-201ENST00000403408 SYT5O00445 386 aa11.04□□□□□ -0.64
SPTLC1P3-201ENST00000403408 FCHO1O14526 889 aa11.04□□□□□ -0.64
SPTLC1P3-201ENST00000403408 ZNF189O75820 626 aaPredicted RBP11.04□□□□□ -0.64
SPTLC1P3-201ENST00000403408 GAS8O95995 478 aa11.04□□□□□ -0.64
SPTLC1P3-201ENST00000403408 HEXAP06865 529 aa11.04□□□□□ -0.64
SPTLC1P3-201ENST00000403408 ZNF888P0CJ79 500 aaPredicted RBP11.04□□□□□ -0.64
SPTLC1P3-201ENST00000403408 NPPBP16860 134 aa11.04□□□□□ -0.64
SPTLC1P3-201ENST00000403408 IL10P22301 178 aa11.04□□□□□ -0.64
SPTLC1P3-201ENST00000403408 MAGEA5P43359 124 aa11.04□□□□□ -0.64
SPTLC1P3-201ENST00000403408 HNRNPFP52597 415 aaKnown RBP11.04□□□□□ -0.64
SPTLC1P3-201ENST00000403408 WNT3P56703 355 aa11.04□□□□□ -0.64
SPTLC1P3-201ENST00000403408 FOXO1Q12778 655 aa11.04□□□□□ -0.64
SPTLC1P3-201ENST00000403408 ZNF750Q32MQ0 723 aa11.04□□□□□ -0.64
SPTLC1P3-201ENST00000403408 WDR53Q7Z5U6 358 aaPredicted RBP11.04□□□□□ -0.64
SPTLC1P3-201ENST00000403408 OTUD6BQ8N6M0 293 aa11.04□□□□□ -0.64
SPTLC1P3-201ENST00000403408 TMEM52Q8NDY8 209 aa11.04□□□□□ -0.64
SPTLC1P3-201ENST00000403408 ATG10Q9H0Y0 220 aa11.04□□□□□ -0.64
SPTLC1P3-201ENST00000403408 KLHL31Q9H511 634 aa11.04□□□□□ -0.64
SPTLC1P3-201ENST00000403408 SLC24A3Q9HC58 644 aa11.04□□□□□ -0.64
SPTLC1P3-201ENST00000403408 CCDC177Q9NQR7 707 aaPredicted RBP11.04□□□□□ -0.64
SPTLC1P3-201ENST00000403408 ZFATQ9P243 1243 aa11.04□□□□□ -0.64
SPTLC1P3-201ENST00000403408 SPRR3Q9UBC9 169 aa11.04□□□□□ -0.64
SPTLC1P3-201ENST00000403408 ADAM21Q9UKJ8 722 aa11.04□□□□□ -0.64
SPTLC1P3-201ENST00000403408 PPIEQ9UNP9 301 aaKnown RBP11.04□□□□□ -0.64
SPTLC1P3-201ENST00000403408 GOLGA6L9A6NEM1 432 aa11.03□□□□□ -0.64
SPTLC1P3-201ENST00000403408 ZNF839A8K0R7 811 aa11.03□□□□□ -0.64
SPTLC1P3-201ENST00000403408 E7EVH7 732 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms