RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 ASB12Q8WXK4 309 aa15.31■□□□□ 0.04
CHRFAM7A-203ENST00000401522 DTD2Q96FN9 168 aa15.31■□□□□ 0.04
CHRFAM7A-203ENST00000401522 AASDHPPTQ9NRN7 309 aa15.31■□□□□ 0.04
CHRFAM7A-203ENST00000401522 IRAK4Q9NWZ3 460 aa15.31■□□□□ 0.04
CHRFAM7A-203ENST00000401522 VNN3Q9NY84 501 aa15.31■□□□□ 0.04
CHRFAM7A-203ENST00000401522 U3KQV3 271 aa15.31■□□□□ 0.04
CHRFAM7A-203ENST00000401522 ZNF99A8MXY4 864 aaPredicted RBP15.3■□□□□ 0.04
CHRFAM7A-203ENST00000401522 FPGTO14772 594 aa15.3■□□□□ 0.04
CHRFAM7A-203ENST00000401522 LRATO95237 230 aa15.3■□□□□ 0.04
CHRFAM7A-203ENST00000401522 HNRNPCP07910 306 aaKnown RBP eCLIP15.3■□□□□ 0.04
CHRFAM7A-203ENST00000401522 ATP1B2P14415 290 aaPredicted RBP15.3■□□□□ 0.04
CHRFAM7A-203ENST00000401522 NUMA1Q14980 2115 aa15.3■□□□□ 0.04
CHRFAM7A-203ENST00000401522 ZNF284Q2VY69 593 aa15.3■□□□□ 0.04
CHRFAM7A-203ENST00000401522 ZCCHC8Q6NZY4 707 aaKnown RBP15.3■□□□□ 0.04
CHRFAM7A-203ENST00000401522 GALNT18Q6P9A2 607 aa15.3■□□□□ 0.04
CHRFAM7A-203ENST00000401522 SLC16A12Q6ZSM3 486 aa15.3■□□□□ 0.04
CHRFAM7A-203ENST00000401522 ZNF551Q7Z340 670 aaPredicted RBP15.3■□□□□ 0.04
CHRFAM7A-203ENST00000401522 FAM160A2Q8N612 972 aaPredicted RBP15.3■□□□□ 0.04
CHRFAM7A-203ENST00000401522 DGCR6LQ9BY27 220 aa15.3■□□□□ 0.04
CHRFAM7A-203ENST00000401522 SLC17A9Q9BYT1 436 aa15.3■□□□□ 0.04
CHRFAM7A-203ENST00000401522 FAM83DQ9H4H8 585 aa15.3■□□□□ 0.04
CHRFAM7A-203ENST00000401522 PAK1IP1Q9NWT1 392 aaPredicted RBP15.3■□□□□ 0.04
CHRFAM7A-203ENST00000401522 FAM120CQ9NX05 1096 aaKnown RBP15.3■□□□□ 0.04
CHRFAM7A-203ENST00000401522 COQ6Q9Y2Z9 468 aa15.3■□□□□ 0.04
CHRFAM7A-203ENST00000401522 TPRKBQ9Y3C4 175 aa15.3■□□□□ 0.04
CHRFAM7A-203ENST00000401522 LRRK1Q38SD2 2015 aa15.3■□□□□ 0.04
CHRFAM7A-203ENST00000401522 CLIC1O00299 241 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 LATO43561 262 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 GPR37L1O60883 481 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 NDUFS2O75306 463 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 BCAS1O75363 584 aaPredicted RBP15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 EPN2O95208 641 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 ANGPTL1O95841 491 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 SEMG1P04279 462 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 JUNDP17535 347 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 FPR1P21462 350 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 HTR1BP28222 390 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 DNAJA1P31689 397 aaKnown RBP15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 HALP42357 657 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 C21orf58P58505 322 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 CXCR4P61073 352 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 GSTM4Q03013 218 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 CSTF1Q05048 431 aaKnown RBP15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 PIGFQ07326 219 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 DPTQ07507 201 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 RAPSNQ13702 412 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 VMACQ2NL98 169 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 LIPJQ5W064 366 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 CAPN13Q6MZZ7 669 aaPredicted RBP15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 ZNF765Q7L2R6 523 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 WDR5BQ86VZ2 330 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 SYT12Q8IV01 421 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 ZZZ3Q8IYH5 903 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 SLC15A4Q8N697 577 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 STARD8Q92502 1023 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 FBXL8Q96CD0 374 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 SPACA7Q96KW9 195 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 PANX1Q96RD7 426 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 REXO4Q9GZR2 422 aaKnown RBP15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 PCED1AQ9H1Q7 454 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 ABCG8Q9H221 673 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 SLC22A14Q9Y267 594 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 PLXND1Q9Y4D7 1925 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 PRR23AA6NEV1 266 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 PRR33A8MZF0 331 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 CFAP99D6REC4 459 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 PTGES3LE9PB15 166 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 MITFO75030 526 aaPredicted RBP15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 PAK4O96013 591 aaPredicted RBP15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 B3GALT4O96024 378 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 FABP3P05413 133 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 ENGP17813 658 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 GPX2P18283 190 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 ITPKAP23677 461 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 CCR5P51681 352 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 GP2P55259 537 aaKnown RBP15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 PPP2CBP62714 309 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 PPP2CAP67775 309 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 CHIT1Q13231 466 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 SGCGQ13326 291 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 SLC14A1Q13336 389 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 FGL2Q14314 439 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 SPCS2Q15005 226 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 HENMT1Q5T8I9 393 aaKnown RBP15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 KDM4DQ6B0I6 523 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 DCDC5Q6ZRR9 648 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 CYP4Z1Q86W10 505 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 VRK3Q8IV63 474 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 CADM4Q8NFZ8 388 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 OR8J2Q8NGG1 315 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 CHPT1Q8WUD6 406 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 SCAMP4Q969E2 229 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 PYCR2Q96C36 320 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 NUS1Q96E22 293 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 METTL2AQ96IZ6 378 aaKnown RBP15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 EGLN2Q96KS0 407 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 APOL4Q9BPW4 351 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 SPATA9Q9BWV2 254 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 GPR174Q9BXC1 333 aa15.29■□□□□ 0.04
CHRFAM7A-203ENST00000401522 ASPSCR1Q9BZE9 553 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms