RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 VNN2O95498 520 aa16.43■□□□□ 0.22
PTPRA-205ENST00000399903 PRKACAP17612 351 aa16.43■□□□□ 0.22
PTPRA-205ENST00000399903 RPS5P46782 204 aaKnown RBP16.43■□□□□ 0.22
PTPRA-205ENST00000399903 DGKKQ5KSL6 1271 aa16.43■□□□□ 0.22
PTPRA-205ENST00000399903 C22orf42Q6IC83 251 aa16.43■□□□□ 0.22
PTPRA-205ENST00000399903 BCDIN3DQ7Z5W3 292 aaKnown RBP16.43■□□□□ 0.22
PTPRA-205ENST00000399903 OR7D4Q8NG98 312 aa16.43■□□□□ 0.22
PTPRA-205ENST00000399903 MRPL9Q9BYD2 267 aaKnown RBP16.43■□□□□ 0.22
PTPRA-205ENST00000399903 POLR2J2Q9GZM3 115 aaKnown RBP16.43■□□□□ 0.22
PTPRA-205ENST00000399903 MARCH5Q9NX47 278 aa16.43■□□□□ 0.22
PTPRA-205ENST00000399903 ZNF222Q9UK12 451 aa16.43■□□□□ 0.22
PTPRA-205ENST00000399903 NUPL2O15504 423 aaKnown RBP16.43■□□□□ 0.22
PTPRA-205ENST00000399903 RPS24P62847 133 aaKnown RBP16.43■□□□□ 0.22
PTPRA-205ENST00000399903 CSNK2BP67870 215 aa16.43■□□□□ 0.22
PTPRA-205ENST00000399903 SAXO2Q658L1 398 aa16.43■□□□□ 0.22
PTPRA-205ENST00000399903 FUT10Q6P4F1 479 aa16.43■□□□□ 0.22
PTPRA-205ENST00000399903 AFTPHQ6ULP2 937 aa16.43■□□□□ 0.22
PTPRA-205ENST00000399903 SIGLEC11Q96RL6 698 aa16.43■□□□□ 0.22
PTPRA-205ENST00000399903 COPS8Q99627 209 aa16.43■□□□□ 0.22
PTPRA-205ENST00000399903 KCNH6Q9H252 994 aa16.43■□□□□ 0.22
PTPRA-205ENST00000399903 SCML2Q9UQR0 700 aa16.43■□□□□ 0.22
PTPRA-205ENST00000399903 WNT9AO14904 365 aa16.42■□□□□ 0.22
PTPRA-205ENST00000399903 TNNI3P19429 210 aa16.42■□□□□ 0.22
PTPRA-205ENST00000399903 HLA-DPA1P20036 260 aa16.42■□□□□ 0.22
PTPRA-205ENST00000399903 MAGEA2P43356 314 aa16.42■□□□□ 0.22
PTPRA-205ENST00000399903 BNC1Q01954 994 aa16.42■□□□□ 0.22
PTPRA-205ENST00000399903 PPIGQ13427 754 aaKnown RBP eCLIP16.42■□□□□ 0.221e-7■■□□□ 12.2
PTPRA-205ENST00000399903 CTSL3PQ5NE16 218 aa16.42■□□□□ 0.22
PTPRA-205ENST00000399903 SLC37A3Q8NCC5 494 aa16.42■□□□□ 0.22
PTPRA-205ENST00000399903 ZYG11BQ9C0D3 744 aa16.42■□□□□ 0.22
PTPRA-205ENST00000399903 ELOVL6Q9H5J4 265 aa16.42■□□□□ 0.22
PTPRA-205ENST00000399903 FAM8A1Q9UBU6 413 aa16.42■□□□□ 0.22
PTPRA-205ENST00000399903 RWDD3Q9Y3V2 267 aa16.42■□□□□ 0.22
PTPRA-205ENST00000399903 J3KTA2 159 aa16.42■□□□□ 0.22
PTPRA-205ENST00000399903 PDE9AO76083 593 aa16.42■□□□□ 0.22
PTPRA-205ENST00000399903 SOX14O95416 240 aa16.42■□□□□ 0.22
PTPRA-205ENST00000399903 TP53P04637 393 aaPredicted RBP16.42■□□□□ 0.22
PTPRA-205ENST00000399903 ACPPP15309 386 aa16.42■□□□□ 0.22
PTPRA-205ENST00000399903 DDCP20711 480 aa16.42■□□□□ 0.22
PTPRA-205ENST00000399903 EVI2BP34910 448 aa16.42■□□□□ 0.22
PTPRA-205ENST00000399903 TARDBPQ13148 414 aaKnown RBP eCLIP16.42■□□□□ 0.221e-12■■■■■ 41.8
PTPRA-205ENST00000399903 PAQR6Q6TCH4 344 aa16.42■□□□□ 0.22
PTPRA-205ENST00000399903 C16orf59Q7L2K0 433 aa16.42■□□□□ 0.22
PTPRA-205ENST00000399903 GALNT7Q86SF2 657 aa16.42■□□□□ 0.22
PTPRA-205ENST00000399903 ESX1Q8N693 406 aa16.42■□□□□ 0.22
PTPRA-205ENST00000399903 GALNT11Q8NCW6 608 aa16.42■□□□□ 0.22
PTPRA-205ENST00000399903 AUTS2Q8WXX7 1259 aa16.42■□□□□ 0.22
PTPRA-205ENST00000399903 SLC39A13Q96H72 371 aa16.42■□□□□ 0.22
PTPRA-205ENST00000399903 GDF15Q99988 308 aa16.42■□□□□ 0.22
PTPRA-205ENST00000399903 GABARAPL1Q9H0R8 117 aa16.42■□□□□ 0.22
PTPRA-205ENST00000399903 SERHLQ9NQF3 203 aa16.42■□□□□ 0.22
PTPRA-205ENST00000399903 SLC28A1O00337 649 aa16.42■□□□□ 0.22
PTPRA-205ENST00000399903 LZTS3O60299 673 aaPredicted RBP16.42■□□□□ 0.22
PTPRA-205ENST00000399903 EOMESO95936 686 aa16.42■□□□□ 0.22
PTPRA-205ENST00000399903 CST5P28325 142 aaPredicted RBP16.42■□□□□ 0.22
PTPRA-205ENST00000399903 KIR3DL1P43629 444 aa16.42■□□□□ 0.22
PTPRA-205ENST00000399903 EXOC3L2Q2M3D2 409 aa16.42■□□□□ 0.22
PTPRA-205ENST00000399903 LCN1P1Q5VSP4 162 aa16.42■□□□□ 0.22
PTPRA-205ENST00000399903 MDGA1Q8NFP4 955 aa16.42■□□□□ 0.22
PTPRA-205ENST00000399903 PIH1D2Q8WWB5 315 aa16.42■□□□□ 0.22
PTPRA-205ENST00000399903 C17orf62Q9BQA9 187 aa16.42■□□□□ 0.22
PTPRA-205ENST00000399903 CDCP1Q9H5V8 836 aa16.42■□□□□ 0.22
PTPRA-205ENST00000399903 HMX1Q9NP08 348 aaPredicted RBP16.42■□□□□ 0.22
PTPRA-205ENST00000399903 ELOVL2Q9NXB9 296 aa16.42■□□□□ 0.22
PTPRA-205ENST00000399903 PPT2Q9UMR5 302 aa16.42■□□□□ 0.22
PTPRA-205ENST00000399903 TLR6Q9Y2C9 796 aa16.42■□□□□ 0.22
PTPRA-205ENST00000399903 PCDHGB3Q9Y5G1 929 aa16.42■□□□□ 0.22
PTPRA-205ENST00000399903 KLK4Q9Y5K2 254 aa16.42■□□□□ 0.22
PTPRA-205ENST00000399903 TNPO3Q9Y5L0 923 aaKnown RBP16.42■□□□□ 0.22
PTPRA-205ENST00000399903 CFAP20Q9Y6A4 193 aaKnown RBP16.42■□□□□ 0.22
PTPRA-205ENST00000399903 LOC285095A0A1B0GVY8 99 aa16.41■□□□□ 0.22
PTPRA-205ENST00000399903 WASHC1A8K0Z3 465 aa16.41■□□□□ 0.22
PTPRA-205ENST00000399903 FAM227AF5H4B4 570 aa16.41■□□□□ 0.22
PTPRA-205ENST00000399903 SLC2A2P11168 524 aaPredicted RBP16.41■□□□□ 0.22
PTPRA-205ENST00000399903 OR1D2P34982 312 aa16.41■□□□□ 0.22
PTPRA-205ENST00000399903 CLCN7P51798 805 aa16.41■□□□□ 0.22
PTPRA-205ENST00000399903 PSPHP78330 225 aa16.41■□□□□ 0.22
PTPRA-205ENST00000399903 NOGQ13253 232 aa16.41■□□□□ 0.22
PTPRA-205ENST00000399903 IL18Q14116 193 aa16.41■□□□□ 0.22
PTPRA-205ENST00000399903 DEFB115Q30KQ5 88 aa16.41■□□□□ 0.22
PTPRA-205ENST00000399903 CALHM3Q86XJ0 350 aa16.41■□□□□ 0.22
PTPRA-205ENST00000399903 PLCZ1Q86YW0 608 aa16.41■□□□□ 0.22
PTPRA-205ENST00000399903 STK40Q8N2I9 435 aa16.41■□□□□ 0.22
PTPRA-205ENST00000399903 CIPCQ9C0C6 399 aa16.41■□□□□ 0.22
PTPRA-205ENST00000399903 NUDT4Q9NZJ9 180 aa16.41■□□□□ 0.22
PTPRA-205ENST00000399903 NDRG2Q9UN36 371 aaKnown RBP16.41■□□□□ 0.22
PTPRA-205ENST00000399903 SSR3Q9UNL2 185 aa16.41■□□□□ 0.22
PTPRA-205ENST00000399903 MAP2K3P46734 347 aa16.41■□□□□ 0.22
PTPRA-205ENST00000399903 C5orf22Q49AR2 442 aa16.41■□□□□ 0.22
PTPRA-205ENST00000399903 FAM26DQ5JW98 314 aa16.41■□□□□ 0.22
PTPRA-205ENST00000399903 TMIGD1Q6UXZ0 262 aa16.41■□□□□ 0.22
PTPRA-205ENST00000399903 ZNF367Q7RTV3 350 aa16.41■□□□□ 0.22
PTPRA-205ENST00000399903 DENND1CQ8IV53 801 aa16.41■□□□□ 0.22
PTPRA-205ENST00000399903 CASD1Q96PB1 797 aa16.41■□□□□ 0.22
PTPRA-205ENST00000399903 WACQ9BTA9 647 aa16.41■□□□□ 0.22
PTPRA-205ENST00000399903 B3GNT4Q9C0J1 378 aa16.41■□□□□ 0.22
PTPRA-205ENST00000399903 ASAH2Q9NR71 780 aa16.41■□□□□ 0.22
PTPRA-205ENST00000399903 PRKAB1Q9Y478 270 aa16.41■□□□□ 0.22
PTPRA-205ENST00000399903 MANBAO00462 879 aa16.4■□□□□ 0.22
PTPRA-205ENST00000399903 PDPK1O15530 556 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms