RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 SMIM23A6NLE4 172 aa13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 PYCARD-AS1I3L0S3 204 aa13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 C8orf89P0DMQ9 161 aa13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 PCNAP12004 261 aa13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 EEF1DP29692 281 aaKnown RBP13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 PLA2G16P53816 162 aa13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 STXBP1P61764 594 aaKnown RBP13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 BTN3A2P78410 334 aa13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 PCDH1Q08174 1060 aa13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 AIMP2Q13155 320 aaKnown RBP13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 LAPTM5Q13571 262 aa13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 GTF2H2Q13888 395 aa13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 MYBPC3Q14896 1274 aa13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 HIST2H2ACQ16777 129 aaPredicted RBP13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 PAGE2BQ5JRK9 111 aa13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 HIST2H2AA3Q6FI13 130 aa13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 GTF2H2CQ6P1K8 395 aa13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 TMEM205Q6UW68 189 aa13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 GOLGA7Q7Z5G4 137 aa13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 RNF175Q8N4F7 328 aa13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 NSUN5Q96P11 429 aaKnown RBP13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 F2RL3Q96RI0 385 aa13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 CCDC77Q9BR77 488 aa13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 REXO4Q9GZR2 422 aaKnown RBP13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 MRPL46Q9H2W6 279 aaKnown RBP13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 RHBGQ9H310 441 aa13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 IPPKQ9H8X2 491 aa13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 ZBTB20Q9HC78 741 aaPredicted RBP13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 LANCL2Q9NS86 450 aa13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 TMEM216Q9P0N5 145 aa13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 IGHV1-45A0A0A0MS14 117 aa13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 FAM227AF5H4B4 570 aa13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 FHP07954 510 aa13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 PYGBP11216 843 aa13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 PLA2G2AP14555 144 aa13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 GSTM2P28161 218 aa13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 HSD17B3P37058 310 aa13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 SOX8P57073 446 aa13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 SKP1P63208 163 aa13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 ERCC6LQ2NKX8 1250 aa13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 ADPRMQ3LIE5 342 aa13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 MED27Q6P2C8 311 aa13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 NDUFAF7Q7L592 441 aa13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 LAS2Q8IYD9 372 aa13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 CYP4X1Q8N118 509 aa13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 TEX19Q8NA77 164 aa13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 OR7G3Q8NG95 312 aa13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 EPS8L3Q8TE67 593 aaKnown RBP13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 METTL21AQ8WXB1 218 aa13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 GAL3ST3Q96A11 431 aa13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 TBC1D20Q96BZ9 403 aa13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 THOC3Q96J01 351 aaKnown RBP13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 CDK15Q96Q40 435 aa13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 SMAD5Q99717 465 aaKnown RBP13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 NOL11Q9H8H0 719 aaKnown RBP13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 ACTR8Q9H981 624 aa13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 PRM3Q9NNZ6 103 aa13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 G3BP2Q9UN86 482 aaKnown RBP13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 TNPO3Q9Y5L0 923 aaKnown RBP13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 NUP210LQ5VU65 1888 aa13.28□□□□□ -0.28
HLA-DQB1-202ENST00000399079 LOC102723996A0A087X1L8 192 aa13.28□□□□□ -0.28
HLA-DQB1-202ENST00000399079 NSG1A0A0A6YYJ2 146 aa13.28□□□□□ -0.28
HLA-DQB1-202ENST00000399079 B4GALT2O60909 372 aa13.28□□□□□ -0.28
HLA-DQB1-202ENST00000399079 SMIM24O75264 130 aa13.28□□□□□ -0.28
HLA-DQB1-202ENST00000399079 HPP00738 406 aa13.28□□□□□ -0.28
HLA-DQB1-202ENST00000399079 TGFB1P01137 390 aa13.28□□□□□ -0.28
HLA-DQB1-202ENST00000399079 CELA2AP08217 269 aa13.28□□□□□ -0.28
HLA-DQB1-202ENST00000399079 CD97P48960 835 aa13.28□□□□□ -0.28
HLA-DQB1-202ENST00000399079 BTG2P78543 158 aa13.28□□□□□ -0.28
HLA-DQB1-202ENST00000399079 RHAGQ02094 409 aa13.28□□□□□ -0.28
HLA-DQB1-202ENST00000399079 KLRB1Q12918 225 aa13.28□□□□□ -0.28
HLA-DQB1-202ENST00000399079 DDX39BQ13838 428 aaKnown RBP13.28□□□□□ -0.28
HLA-DQB1-202ENST00000399079 RUNX2Q13950 521 aa13.28□□□□□ -0.28
HLA-DQB1-202ENST00000399079 ABRAXAS2Q15018 415 aa13.28□□□□□ -0.28
HLA-DQB1-202ENST00000399079 PCOLCEQ15113 449 aa13.28□□□□□ -0.28
HLA-DQB1-202ENST00000399079 NADK2Q4G0N4 442 aa13.28□□□□□ -0.28
HLA-DQB1-202ENST00000399079 GRHL2Q6ISB3 625 aa13.28□□□□□ -0.28
HLA-DQB1-202ENST00000399079 CA13Q8N1Q1 262 aa13.28□□□□□ -0.28
HLA-DQB1-202ENST00000399079 PIP4P2Q8N4L2 257 aa13.28□□□□□ -0.28
HLA-DQB1-202ENST00000399079 OR2L5Q8NG80 312 aa13.28□□□□□ -0.28
HLA-DQB1-202ENST00000399079 OR52B6Q8NGF0 335 aa13.28□□□□□ -0.28
HLA-DQB1-202ENST00000399079 OR2W6PQ8NHA6 318 aa13.28□□□□□ -0.28
HLA-DQB1-202ENST00000399079 ZNF473Q8WTR7 871 aaKnown RBP13.28□□□□□ -0.28
HLA-DQB1-202ENST00000399079 TSLPQ969D9 159 aa13.28□□□□□ -0.28
HLA-DQB1-202ENST00000399079 SEC16BQ96JE7 1060 aa13.28□□□□□ -0.28
HLA-DQB1-202ENST00000399079 VPS50Q96JG6 964 aa13.28□□□□□ -0.28
HLA-DQB1-202ENST00000399079 FAR2Q96K12 515 aa13.28□□□□□ -0.28
HLA-DQB1-202ENST00000399079 OR1F2PQ96R84 312 aa13.28□□□□□ -0.28
HLA-DQB1-202ENST00000399079 MTERF1Q99551 399 aaKnown RBP13.28□□□□□ -0.28
HLA-DQB1-202ENST00000399079 MFRPQ9BY79 579 aa13.28□□□□□ -0.28
HLA-DQB1-202ENST00000399079 TRIM4Q9C037 500 aa13.28□□□□□ -0.28
HLA-DQB1-202ENST00000399079 ZBTB26Q9HCK0 441 aa13.28□□□□□ -0.28
HLA-DQB1-202ENST00000399079 ANAPC2Q9UJX6 822 aa13.28□□□□□ -0.28
HLA-DQB1-202ENST00000399079 PCTPQ9UKL6 214 aa13.28□□□□□ -0.28
HLA-DQB1-202ENST00000399079 RNF11Q9Y3C5 154 aa13.28□□□□□ -0.28
HLA-DQB1-202ENST00000399079 ZNF451Q9Y4E5 1061 aa13.28□□□□□ -0.28
HLA-DQB1-202ENST00000399079 RELNP78509 3460 aa13.28□□□□□ -0.28
HLA-DQB1-202ENST00000399079 SCN2AQ99250 2005 aa13.27□□□□□ -0.29
HLA-DQB1-202ENST00000399079 GCN1Q92616 2671 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms