RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 ANKRD54Q6NXT1 300 aa14.09□□□□□ -0.15
RPRD1A-202ENST00000399022 TICAM1Q8IUC6 712 aa14.09□□□□□ -0.15
RPRD1A-202ENST00000399022 TMEM151AQ8N4L1 468 aa14.09□□□□□ -0.15
RPRD1A-202ENST00000399022 LINC01465Q8N7H1 131 aa14.09□□□□□ -0.15
RPRD1A-202ENST00000399022 TCEANCQ8N8B7 351 aa14.09□□□□□ -0.15
RPRD1A-202ENST00000399022 CXorf40AQ8TE69 158 aa14.09□□□□□ -0.15
RPRD1A-202ENST00000399022 L3HYPDHQ96EM0 354 aa14.09□□□□□ -0.15
RPRD1A-202ENST00000399022 TMED9Q9BVK6 235 aa14.09□□□□□ -0.15
RPRD1A-202ENST00000399022 MND1Q9BWT6 205 aa14.09□□□□□ -0.15
RPRD1A-202ENST00000399022 HCSTQ9UBK5 93 aa14.09□□□□□ -0.15
RPRD1A-202ENST00000399022 COL24A1Q17RW2 1714 aa14.09□□□□□ -0.15
RPRD1A-202ENST00000399022 C2orf78A6NCI8 922 aa14.09□□□□□ -0.15
RPRD1A-202ENST00000399022 SLC9A3R1O14745 358 aaPredicted RBP14.09□□□□□ -0.15
RPRD1A-202ENST00000399022 ALX3O95076 343 aa14.09□□□□□ -0.15
RPRD1A-202ENST00000399022 TNFSF8P32971 234 aa14.09□□□□□ -0.15
RPRD1A-202ENST00000399022 ASMTP46597 345 aa14.09□□□□□ -0.15
RPRD1A-202ENST00000399022 PSMD4P55036 377 aaKnown RBP14.09□□□□□ -0.15
RPRD1A-202ENST00000399022 SPHARQ15513 63 aa14.09□□□□□ -0.15
RPRD1A-202ENST00000399022 KANK2Q63ZY3 851 aa14.09□□□□□ -0.15
RPRD1A-202ENST00000399022 KRT78Q8N1N4 520 aa14.09□□□□□ -0.15
RPRD1A-202ENST00000399022 SIMC1Q8NDZ2 872 aa14.09□□□□□ -0.15
RPRD1A-202ENST00000399022 GON7Q9BXV9 100 aa14.09□□□□□ -0.15
RPRD1A-202ENST00000399022 SUV39H2Q9H5I1 410 aa14.09□□□□□ -0.15
RPRD1A-202ENST00000399022 SLC22A14Q9Y267 594 aa14.09□□□□□ -0.15
RPRD1A-202ENST00000399022 FAM155AB1AL88 458 aaPredicted RBP14.09□□□□□ -0.15
RPRD1A-202ENST00000399022 L7N2F9 121 aa14.09□□□□□ -0.15
RPRD1A-202ENST00000399022 HAS3O00219 553 aa14.09□□□□□ -0.15
RPRD1A-202ENST00000399022 DNASE1P24855 282 aa14.09□□□□□ -0.15
RPRD1A-202ENST00000399022 GABRB3P28472 473 aa14.09□□□□□ -0.15
RPRD1A-202ENST00000399022 PRDX3P30048 256 aaKnown RBP14.09□□□□□ -0.15
RPRD1A-202ENST00000399022 SCRN3Q0VDG4 424 aa14.09□□□□□ -0.15
RPRD1A-202ENST00000399022 ADAM15Q13444 863 aa14.09□□□□□ -0.15
RPRD1A-202ENST00000399022 MAD2L1BPQ15013 274 aaPredicted RBP14.09□□□□□ -0.15
RPRD1A-202ENST00000399022 CDK10Q15131 360 aa14.09□□□□□ -0.15
RPRD1A-202ENST00000399022 ATP13A5Q4VNC0 1218 aa14.09□□□□□ -0.15
RPRD1A-202ENST00000399022 ZNF691Q5VV52 312 aa14.09□□□□□ -0.15
RPRD1A-202ENST00000399022 ZNF655Q8N720 491 aaPredicted RBP14.09□□□□□ -0.15
RPRD1A-202ENST00000399022 SPERTQ8NA61 448 aa14.09□□□□□ -0.15
RPRD1A-202ENST00000399022 TNFAIP8L1Q8WVP5 186 aa14.09□□□□□ -0.15
RPRD1A-202ENST00000399022 SPATA9Q9BWV2 254 aa14.09□□□□□ -0.15
RPRD1A-202ENST00000399022 DPAGT1Q9H3H5 408 aa14.09□□□□□ -0.15
RPRD1A-202ENST00000399022 GPN1Q9HCN4 374 aaPredicted RBP14.09□□□□□ -0.15
RPRD1A-202ENST00000399022 RAD18Q9NS91 495 aa14.09□□□□□ -0.15
RPRD1A-202ENST00000399022 UBQLN2Q9UHD9 624 aa14.09□□□□□ -0.15
RPRD1A-202ENST00000399022 SPO11Q9Y5K1 396 aa14.09□□□□□ -0.15
RPRD1A-202ENST00000399022 CLCA1A8K7I4 914 aa14.08□□□□□ -0.15
RPRD1A-202ENST00000399022 M0QZQ0 153 aa14.08□□□□□ -0.15
RPRD1A-202ENST00000399022 PIGAP37287 484 aa14.08□□□□□ -0.15
RPRD1A-202ENST00000399022 MANFP55145 182 aaKnown RBP14.08□□□□□ -0.15
RPRD1A-202ENST00000399022 CREMQ03060 361 aa14.08□□□□□ -0.15
RPRD1A-202ENST00000399022 LRIT3Q3SXY7 679 aa14.08□□□□□ -0.15
RPRD1A-202ENST00000399022 CLLU1OSQ5K130 101 aa14.08□□□□□ -0.15
RPRD1A-202ENST00000399022 PGBD2Q6P3X8 592 aa14.08□□□□□ -0.15
RPRD1A-202ENST00000399022 TOMM5Q8N4H5 51 aa14.08□□□□□ -0.15
RPRD1A-202ENST00000399022 ZNF433Q8N7K0 673 aaPredicted RBP14.08□□□□□ -0.15
RPRD1A-202ENST00000399022 KREMEN2Q8NCW0 462 aa14.08□□□□□ -0.15
RPRD1A-202ENST00000399022 GALNT11Q8NCW6 608 aa14.08□□□□□ -0.15
RPRD1A-202ENST00000399022 SLAIN1Q8ND83 568 aa14.08□□□□□ -0.15
RPRD1A-202ENST00000399022 RHEBL1Q8TAI7 183 aa14.08□□□□□ -0.15
RPRD1A-202ENST00000399022 PMEPA1Q969W9 287 aa14.08□□□□□ -0.15
RPRD1A-202ENST00000399022 ZNF382Q96SR6 550 aa14.08□□□□□ -0.15
RPRD1A-202ENST00000399022 CENPOQ9BU64 300 aa14.08□□□□□ -0.15
RPRD1A-202ENST00000399022 GPSM3Q9Y4H4 160 aa14.08□□□□□ -0.15
RPRD1A-202ENST00000399022 FGF4P08620 206 aa14.08□□□□□ -0.16
RPRD1A-202ENST00000399022 TCF3P15923 654 aa14.08□□□□□ -0.16
RPRD1A-202ENST00000399022 EIF2DP41214 584 aaKnown RBP14.08□□□□□ -0.16
RPRD1A-202ENST00000399022 MAGEA2P43356 314 aa14.08□□□□□ -0.16
RPRD1A-202ENST00000399022 VMACQ2NL98 169 aa14.08□□□□□ -0.16
RPRD1A-202ENST00000399022 SHQ1Q6PI26 577 aaKnown RBP14.08□□□□□ -0.16
RPRD1A-202ENST00000399022 MTSS1LQ765P7 747 aa14.08□□□□□ -0.16
RPRD1A-202ENST00000399022 CCDC36Q8IYA8 594 aa14.08□□□□□ -0.16
RPRD1A-202ENST00000399022 OR2AP1Q8NGE2 309 aa14.08□□□□□ -0.16
RPRD1A-202ENST00000399022 SAV1Q9H4B6 383 aaPredicted RBP14.08□□□□□ -0.16
RPRD1A-202ENST00000399022 ENAMQ9NRM1 1142 aa14.08□□□□□ -0.16
RPRD1A-202ENST00000399022 GPR45Q9Y5Y3 372 aa14.08□□□□□ -0.16
RPRD1A-202ENST00000399022 PHIPQ8WWQ0 1821 aa14.08□□□□□ -0.16
RPRD1A-202ENST00000399022 A0A1W2PQL4 384 aaPredicted RBP14.08□□□□□ -0.16
RPRD1A-202ENST00000399022 SAP18O00422 153 aaKnown RBP14.08□□□□□ -0.16
RPRD1A-202ENST00000399022 OAZ2O95190 189 aa14.08□□□□□ -0.16
RPRD1A-202ENST00000399022 ANXA3P12429 323 aa14.08□□□□□ -0.16
RPRD1A-202ENST00000399022 RYKP34925 604 aa14.08□□□□□ -0.16
RPRD1A-202ENST00000399022 TSPAN5P62079 268 aa14.08□□□□□ -0.16
RPRD1A-202ENST00000399022 DPY19L1Q2PZI1 675 aa14.08□□□□□ -0.16
RPRD1A-202ENST00000399022 KLHL22Q53GT1 634 aa14.08□□□□□ -0.16
RPRD1A-202ENST00000399022 TMEM220Q6QAJ8 160 aa14.08□□□□□ -0.16
RPRD1A-202ENST00000399022 C10orf53Q8N6V4 93 aa14.08□□□□□ -0.16
RPRD1A-202ENST00000399022 ZNF557Q8N988 423 aaPredicted RBP14.08□□□□□ -0.16
RPRD1A-202ENST00000399022 VMP1Q96GC9 406 aa14.08□□□□□ -0.16
RPRD1A-202ENST00000399022 MAPKAP1Q9BPZ7 522 aa14.08□□□□□ -0.16
RPRD1A-202ENST00000399022 DPH2Q9BQC3 489 aaPredicted RBP14.08□□□□□ -0.16
RPRD1A-202ENST00000399022 LTB4R2Q9NPC1 389 aa14.08□□□□□ -0.16
RPRD1A-202ENST00000399022 HCN3Q9P1Z3 774 aa14.08□□□□□ -0.16
RPRD1A-202ENST00000399022 UBR3Q6ZT12 1888 aa14.08□□□□□ -0.16
RPRD1A-202ENST00000399022 SCAMP1O15126 338 aa14.08□□□□□ -0.16
RPRD1A-202ENST00000399022 ATG13O75143 517 aa14.08□□□□□ -0.16
RPRD1A-202ENST00000399022 CYBAP13498 195 aa14.08□□□□□ -0.16
RPRD1A-202ENST00000399022 BMP7P18075 431 aa14.08□□□□□ -0.16
RPRD1A-202ENST00000399022 ACSL1P33121 698 aa14.08□□□□□ -0.16
RPRD1A-202ENST00000399022 OR3A3P47888 321 aa14.08□□□□□ -0.16
RPRD1A-202ENST00000399022 AQP6Q13520 282 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms