RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 AP2M1Q96CW1 435 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 NXPE2Q96DL1 559 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 GMPPAQ96IJ6 420 aaPredicted RBP2.38□□□□□ -2.03
CD47-203ENST00000398258 PRAC1Q96KF2 57 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 FAM218AQ96MZ4 157 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 PRAM1Q96QH2 718 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 KRT12Q99456 494 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 LITAFQ99732 161 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 ACAT2Q9BWD1 397 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 IDI2Q9BXS1 227 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 NUSAP1Q9BXS6 441 aaKnown RBP2.38□□□□□ -2.03
CD47-203ENST00000398258 NACAP1Q9BZK3 213 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 TRIM7Q9C029 511 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 SLC39A8Q9C0K1 460 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 NAPBQ9H115 298 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 TMEM245Q9H330 911 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 EPHA6Q9UF33 1036 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 IL19Q9UHD0 177 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 ZNF510Q9Y2H8 683 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 TEX264Q9Y6I9 313 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 UMODL1Q5DID0 1318 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 RPGRIP1LQ68CZ1 1315 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 ARID2Q68CP9 1835 aa2.38□□□□□ -2.03
CD47-203ENST00000398258 A0A087WZ39 114 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 TRBV4-1A0A0J9YWV2 114 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 BICDL2A1A5D9 508 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 MEIOCA2RUB1 952 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 SRRM4A7MD48 611 aaKnown RBP2.37□□□□□ -2.03
CD47-203ENST00000398258 A8MVM7 634 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 ZNF732B4DXR9 585 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 TRMUO75648 421 aaKnown RBP2.37□□□□□ -2.03
CD47-203ENST00000398258 GRAP2O75791 330 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 MT-ND2P03891 347 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 THEGLP0DJG4 465 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 RPL35AP18077 110 aaKnown RBP2.37□□□□□ -2.03
CD47-203ENST00000398258 AADACP22760 399 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 HLA-FP30511 346 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 CHRNB4P30926 498 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 SOX3P41225 446 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 CCR4P51679 360 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 ATP12AP54707 1039 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 GABPAQ06546 454 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 SLC3A1Q07837 685 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 MFGE8Q08431 387 aaPredicted RBP2.37□□□□□ -2.03
CD47-203ENST00000398258 ABRQ12979 859 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 CBX3Q13185 183 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 MSLNQ13421 630 aaPredicted RBP2.37□□□□□ -2.03
CD47-203ENST00000398258 TSTA3Q13630 321 aaPredicted RBP2.37□□□□□ -2.03
CD47-203ENST00000398258 ITGA9Q13797 1035 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 ACKR1Q16570 336 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 TMEM30BQ3MIR4 351 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 FGD3Q5JSP0 725 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 ADAMTSL4-AS1Q5T5F5 129 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 ARHGEF16Q5VV41 709 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 ZNF776Q68DI1 518 aaPredicted RBP2.37□□□□□ -2.03
CD47-203ENST00000398258 TCEAL6Q6IPX3 200 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 ADAM5Q6NVV9 412 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 SLC27A4Q6P1M0 643 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 FIP1L1Q6UN15 594 aaKnown RBP2.37□□□□□ -2.03
CD47-203ENST00000398258 MACC1Q6ZN28 852 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 ZNF410Q86VK4 478 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 ZNF444Q8N0Y2 327 aaPredicted RBP2.37□□□□□ -2.03
CD47-203ENST00000398258 RNF149Q8NC42 400 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 OR5T2Q8NGG2 359 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 OR4D10Q8NGI6 311 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 MGARPQ8TDB4 240 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 MRGPRDQ8TDS7 321 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 CHURC1Q8WUH1 139 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 GGHQ92820 318 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 SLCO4A1Q96BD0 722 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 CFAP36Q96G28 342 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 LRR1Q96L50 414 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 GUCD1Q96NT3 240 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 GAL3ST4Q96RP7 486 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 ASCL2Q99929 193 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 OVOL2Q9BRP0 275 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 FSD1Q9BTV5 496 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 RBM4Q9BWF3 364 aaKnown RBP2.37□□□□□ -2.03
CD47-203ENST00000398258 GFRA4Q9GZZ7 299 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 VIPAS39Q9H9C1 493 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 RPF1Q9H9Y2 349 aaKnown RBP2.37□□□□□ -2.03
CD47-203ENST00000398258 RAB9BQ9NP90 201 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 HACD3Q9P035 362 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 TRMT6Q9UJA5 497 aaKnown RBP2.37□□□□□ -2.03
CD47-203ENST00000398258 SATB2Q9UPW6 733 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 ITM2BQ9Y287 266 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 TMED7Q9Y3B3 224 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 PYGO1Q9Y3Y4 419 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 SELENOKQ9Y6D0 94 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 NEDD4P46934 1319 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 ABCC9O60706 1549 aa2.37□□□□□ -2.03
CD47-203ENST00000398258 TRBV2A0A0J9YWF9 115 aa2.36□□□□□ -2.03
CD47-203ENST00000398258 C2orf92A0A1B0GVN3 265 aa2.36□□□□□ -2.03
CD47-203ENST00000398258 ATP6AP2A0A1C7CYW4 349 aa2.36□□□□□ -2.03
CD47-203ENST00000398258 A0A1W2PR80 420 aa2.36□□□□□ -2.03
CD47-203ENST00000398258 SLC15A5A6NIM6 579 aa2.36□□□□□ -2.03
CD47-203ENST00000398258 HHLA1C9JL84 531 aa2.36□□□□□ -2.03
CD47-203ENST00000398258 E5RGE8 158 aa2.36□□□□□ -2.03
CD47-203ENST00000398258 SLC1A7O00341 560 aa2.36□□□□□ -2.03
CD47-203ENST00000398258 P2RX6O15547 441 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms