RNA–Protein interactions for RNA: ENST00000397763.5

COL6A2-203, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-203ENST00000397763 C6orf47O95873 294 aa13.22□□□□□ -0.29
COL6A2-203ENST00000397763 GALTP07902 379 aa13.22□□□□□ -0.29
COL6A2-203ENST00000397763 SSTR4P31391 388 aa13.22□□□□□ -0.29
COL6A2-203ENST00000397763 SOAT1P35610 550 aa13.22□□□□□ -0.29
COL6A2-203ENST00000397763 HTR3AP46098 478 aa13.22□□□□□ -0.29
COL6A2-203ENST00000397763 PFN3P60673 137 aa13.22□□□□□ -0.29
COL6A2-203ENST00000397763 PTSQ03393 145 aa13.22□□□□□ -0.29
COL6A2-203ENST00000397763 FADDQ13158 208 aa13.22□□□□□ -0.29
COL6A2-203ENST00000397763 ZNF517Q6ZMY9 492 aaPredicted RBP13.22□□□□□ -0.29
COL6A2-203ENST00000397763 SDHCQ99643 169 aaPredicted RBP13.22□□□□□ -0.29
COL6A2-203ENST00000397763 BCL7BQ9BQE9 202 aa13.22□□□□□ -0.29
COL6A2-203ENST00000397763 RPRD1BQ9NQG5 326 aaKnown RBP13.22□□□□□ -0.29
COL6A2-203ENST00000397763 DNAJC27Q9NZQ0 273 aa13.22□□□□□ -0.29
COL6A2-203ENST00000397763 DKK3Q9UBP4 350 aa13.22□□□□□ -0.29
COL6A2-203ENST00000397763 LRFN2Q9ULH4 789 aa13.22□□□□□ -0.29
COL6A2-203ENST00000397763 PCDHB11Q9Y5F2 797 aa13.22□□□□□ -0.29
COL6A2-203ENST00000397763 TMEM88BA6NKF7 163 aa13.21□□□□□ -0.29
COL6A2-203ENST00000397763 TPST2O60704 377 aa13.21□□□□□ -0.29
COL6A2-203ENST00000397763 CSNK1DP48730 415 aa13.21□□□□□ -0.29
COL6A2-203ENST00000397763 TUFMP49411 452 aaKnown RBP13.21□□□□□ -0.29
COL6A2-203ENST00000397763 PRIM2P49643 509 aa13.21□□□□□ -0.29
COL6A2-203ENST00000397763 HBA1P69905 142 aa13.21□□□□□ -0.29
COL6A2-203ENST00000397763 CDKN3Q16667 212 aa13.21□□□□□ -0.29
COL6A2-203ENST00000397763 TCTN1Q2MV58 587 aa13.21□□□□□ -0.29
COL6A2-203ENST00000397763 SYNPOQ8N3V7 929 aa13.21□□□□□ -0.29
COL6A2-203ENST00000397763 PHOX2BQ99453 314 aa13.21□□□□□ -0.29
COL6A2-203ENST00000397763 MGLLQ99685 303 aa13.21□□□□□ -0.29
COL6A2-203ENST00000397763 DOHHQ9BU89 302 aa13.21□□□□□ -0.29
COL6A2-203ENST00000397763 SORBS1Q9BX66 1292 aaKnown RBP13.21□□□□□ -0.29
COL6A2-203ENST00000397763 LINC00597Q9H2U6 94 aa13.21□□□□□ -0.29
COL6A2-203ENST00000397763 MTG2Q9H4K7 406 aa13.21□□□□□ -0.29
COL6A2-203ENST00000397763 CKAP5Q14008 2032 aa13.21□□□□□ -0.29
COL6A2-203ENST00000397763 RGS13O14921 159 aa13.21□□□□□ -0.3
COL6A2-203ENST00000397763 CPNE3O75131 537 aaKnown RBP13.21□□□□□ -0.3
COL6A2-203ENST00000397763 GPX5O75715 221 aa13.21□□□□□ -0.3
COL6A2-203ENST00000397763 MAPK1P28482 360 aa13.21□□□□□ -0.3
COL6A2-203ENST00000397763 UGT2B15P54855 530 aa13.21□□□□□ -0.3
COL6A2-203ENST00000397763 CYP4F8P98187 520 aa13.21□□□□□ -0.3
COL6A2-203ENST00000397763 LINC00299Q6ZSB3 139 aa13.21□□□□□ -0.3
COL6A2-203ENST00000397763 OLIG3Q7RTU3 272 aa13.21□□□□□ -0.3
COL6A2-203ENST00000397763 GPR151Q8TDV0 419 aa13.21□□□□□ -0.3
COL6A2-203ENST00000397763 ASB11Q8WXH4 323 aa13.21□□□□□ -0.3
COL6A2-203ENST00000397763 FAM129BQ96TA1 746 aa13.21□□□□□ -0.3
COL6A2-203ENST00000397763 NRTNQ99748 197 aa13.21□□□□□ -0.3
COL6A2-203ENST00000397763 RANGRFQ9HD47 186 aaPredicted RBP13.21□□□□□ -0.3
COL6A2-203ENST00000397763 ASIC5Q9NY37 505 aa13.21□□□□□ -0.3
COL6A2-203ENST00000397763 NUFIP1Q9UHK0 495 aaKnown RBP13.21□□□□□ -0.3
COL6A2-203ENST00000397763 OR51B4Q9Y5P0 310 aa13.21□□□□□ -0.3
COL6A2-203ENST00000397763 HSPE1-MOB4S4R3N1 261 aa13.21□□□□□ -0.3
COL6A2-203ENST00000397763 PRAMEF33A0A0G2JMD5 474 aa13.2□□□□□ -0.3
COL6A2-203ENST00000397763 ZSCAN5BA6NJL1 495 aa13.2□□□□□ -0.3
COL6A2-203ENST00000397763 TMEM189-UBE2V1I3L0A0 370 aa13.2□□□□□ -0.3
COL6A2-203ENST00000397763 ARHGAP33O14559 1287 aa13.2□□□□□ -0.3
COL6A2-203ENST00000397763 PRAMEF10O60809 474 aa13.2□□□□□ -0.3
COL6A2-203ENST00000397763 TGFB1P01137 390 aa13.2□□□□□ -0.3
COL6A2-203ENST00000397763 TNFSF8P32971 234 aa13.2□□□□□ -0.3
COL6A2-203ENST00000397763 TUBA1BP68363 451 aa13.2□□□□□ -0.3
COL6A2-203ENST00000397763 ZNF45Q02386 682 aa13.2□□□□□ -0.3
COL6A2-203ENST00000397763 PTGES3Q15185 160 aaKnown RBP13.2□□□□□ -0.3
COL6A2-203ENST00000397763 RPS26P11Q5JNZ5 115 aaPredicted RBP13.2□□□□□ -0.3
COL6A2-203ENST00000397763 TUBA1AQ71U36 451 aa13.2□□□□□ -0.3
COL6A2-203ENST00000397763 AQP11Q8NBQ7 271 aa13.2□□□□□ -0.3
COL6A2-203ENST00000397763 KBTBD8Q8NFY9 601 aa13.2□□□□□ -0.3
COL6A2-203ENST00000397763 UBTD2Q8WUN7 234 aa13.2□□□□□ -0.3
COL6A2-203ENST00000397763 TRMT61AQ96FX7 289 aaKnown RBP13.2□□□□□ -0.3
COL6A2-203ENST00000397763 CASD1Q96PB1 797 aa13.2□□□□□ -0.3
COL6A2-203ENST00000397763 PITX2Q99697 317 aa13.2□□□□□ -0.3
COL6A2-203ENST00000397763 KLF16Q9BXK1 252 aaPredicted RBP13.2□□□□□ -0.3
COL6A2-203ENST00000397763 CCDC177Q9NQR7 707 aaPredicted RBP13.2□□□□□ -0.3
COL6A2-203ENST00000397763 ERVW-1Q9UQF0 538 aa13.2□□□□□ -0.3
COL6A2-203ENST00000397763 PCDHGA2Q9Y5H1 932 aa13.2□□□□□ -0.3
COL6A2-203ENST00000397763 DOCK6Q96HP0 2047 aa13.2□□□□□ -0.3
COL6A2-203ENST00000397763 MEN1O00255 615 aa13.2□□□□□ -0.3
COL6A2-203ENST00000397763 CNR2P34972 360 aa13.2□□□□□ -0.3
COL6A2-203ENST00000397763 RPS13P62277 151 aaKnown RBP13.2□□□□□ -0.3
COL6A2-203ENST00000397763 TBCEQ15813 527 aaPredicted RBP13.2□□□□□ -0.3
COL6A2-203ENST00000397763 PTCHD4Q6ZW05 846 aa13.2□□□□□ -0.3
COL6A2-203ENST00000397763 CHST9Q7L1S5 443 aa13.2□□□□□ -0.3
COL6A2-203ENST00000397763 THOC6Q86W42 341 aaKnown RBP13.2□□□□□ -0.3
COL6A2-203ENST00000397763 RNF130Q86XS8 419 aa13.2□□□□□ -0.3
COL6A2-203ENST00000397763 LAX1Q8IWV1 398 aa13.2□□□□□ -0.3
COL6A2-203ENST00000397763 REM2Q8IYK8 340 aaPredicted RBP13.2□□□□□ -0.3
COL6A2-203ENST00000397763 KIAA1958Q8N8K9 716 aa13.2□□□□□ -0.3
COL6A2-203ENST00000397763 SUN5Q8TC36 379 aa13.2□□□□□ -0.3
COL6A2-203ENST00000397763 SOCS4Q8WXH5 440 aa13.2□□□□□ -0.3
COL6A2-203ENST00000397763 ALG14Q96F25 216 aa13.2□□□□□ -0.3
COL6A2-203ENST00000397763 CEP295NLQ96MC4 621 aa13.2□□□□□ -0.3
COL6A2-203ENST00000397763 VPS35Q96QK1 796 aa13.2□□□□□ -0.3
COL6A2-203ENST00000397763 SLC12A9Q9BXP2 914 aa13.2□□□□□ -0.3
COL6A2-203ENST00000397763 OR51B5Q9H339 312 aa13.2□□□□□ -0.3
COL6A2-203ENST00000397763 BRD9Q9H8M2 597 aa13.2□□□□□ -0.3
COL6A2-203ENST00000397763 ZDHHC3Q9NYG2 299 aa13.2□□□□□ -0.3
COL6A2-203ENST00000397763 TRBV5-4A0A0C4DH59 114 aa13.19□□□□□ -0.3
COL6A2-203ENST00000397763 AOC2O75106 756 aa13.19□□□□□ -0.3
COL6A2-203ENST00000397763 ZNF821O75541 412 aaPredicted RBP13.19□□□□□ -0.3
COL6A2-203ENST00000397763 IL1RNP18510 177 aa13.19□□□□□ -0.3
COL6A2-203ENST00000397763 SOX6P35712 828 aa13.19□□□□□ -0.3
COL6A2-203ENST00000397763 RPS19P39019 145 aaKnown RBP13.19□□□□□ -0.3
COL6A2-203ENST00000397763 RAE1P78406 368 aaKnown RBP13.19□□□□□ -0.3
COL6A2-203ENST00000397763 SRSF11Q05519 484 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms