RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 FAM60AQ9NP50 221 aa18.56■□□□□ 0.56
PDLIM2-205ENST00000397761 EXO1Q9UQ84 846 aaKnown RBP18.56■□□□□ 0.56
PDLIM2-205ENST00000397761 LOC105369274A0A096LPK9 316 aa18.55■□□□□ 0.56
PDLIM2-205ENST00000397761 A0A0A6YYD5 115 aa18.55■□□□□ 0.56
PDLIM2-205ENST00000397761 LOC102723532A0A0G2JNH3 316 aa18.55■□□□□ 0.56
PDLIM2-205ENST00000397761 SLC9B1P1A6NJY1 282 aa18.55■□□□□ 0.56
PDLIM2-205ENST00000397761 H0YGG7 62 aa18.55■□□□□ 0.56
PDLIM2-205ENST00000397761 P2RX6O15547 441 aa18.55■□□□□ 0.56
PDLIM2-205ENST00000397761 SCELO95171 688 aa18.55■□□□□ 0.56
PDLIM2-205ENST00000397761 SERPIND1P05546 499 aa18.55■□□□□ 0.56
PDLIM2-205ENST00000397761 PGRP06401 933 aa18.55■□□□□ 0.56
PDLIM2-205ENST00000397761 SLC35G6P0C7Q6 338 aa18.55■□□□□ 0.56
PDLIM2-205ENST00000397761 SMIM10L1P0DMW3 83 aa18.55■□□□□ 0.56
PDLIM2-205ENST00000397761 MYF5P13349 255 aa18.55■□□□□ 0.56
PDLIM2-205ENST00000397761 CSF2RBP32927 897 aa18.55■□□□□ 0.56
PDLIM2-205ENST00000397761 GABRA4P48169 554 aa18.55■□□□□ 0.56
PDLIM2-205ENST00000397761 ARF3P61204 181 aaPredicted RBP18.55■□□□□ 0.56
PDLIM2-205ENST00000397761 RGS1Q08116 209 aa18.55■□□□□ 0.56
PDLIM2-205ENST00000397761 UGT8Q16880 541 aa18.55■□□□□ 0.56
PDLIM2-205ENST00000397761 MMEL1Q495T6 779 aa18.55■□□□□ 0.56
PDLIM2-205ENST00000397761 TOR1AIP1Q5JTV8 583 aa18.55■□□□□ 0.56
PDLIM2-205ENST00000397761 SPANXN4Q5MJ08 99 aa18.55■□□□□ 0.56
PDLIM2-205ENST00000397761 NKAIN2Q5VXU1 208 aa18.55■□□□□ 0.56
PDLIM2-205ENST00000397761 OR4C11Q6IEV9 310 aa18.55■□□□□ 0.56
PDLIM2-205ENST00000397761 FRMPD2BQ6IN97 320 aa18.55■□□□□ 0.56
PDLIM2-205ENST00000397761 FAM71E1Q6IPT2 247 aa18.55■□□□□ 0.56
PDLIM2-205ENST00000397761 MSANTD1Q6ZTZ1 278 aa18.55■□□□□ 0.56
PDLIM2-205ENST00000397761 PLXDC1Q8IUK5 500 aa18.55■□□□□ 0.56
PDLIM2-205ENST00000397761 OR4N4Q8N0Y3 316 aa18.55■□□□□ 0.56
PDLIM2-205ENST00000397761 PGAM4Q8N0Y7 254 aa18.55■□□□□ 0.56
PDLIM2-205ENST00000397761 DNAJC22Q8N4W6 341 aa18.55■□□□□ 0.56
PDLIM2-205ENST00000397761 EID2Q8N6I1 236 aa18.55■□□□□ 0.56
PDLIM2-205ENST00000397761 CAMKVQ8NCB2 501 aa18.55■□□□□ 0.56
PDLIM2-205ENST00000397761 C16orf78Q8WTQ4 265 aa18.55■□□□□ 0.56
PDLIM2-205ENST00000397761 NCSTNQ92542 709 aa18.55■□□□□ 0.56
PDLIM2-205ENST00000397761 GAL3ST3Q96A11 431 aa18.55■□□□□ 0.56
PDLIM2-205ENST00000397761 SMIM10Q96HG1 83 aa18.55■□□□□ 0.56
PDLIM2-205ENST00000397761 KCNC2Q96PR1 638 aa18.55■□□□□ 0.56
PDLIM2-205ENST00000397761 TEFMQ96QE5 360 aaKnown RBP18.55■□□□□ 0.56
PDLIM2-205ENST00000397761 MACROD1Q9BQ69 325 aa18.55■□□□□ 0.56
PDLIM2-205ENST00000397761 TBCDQ9BTW9 1192 aa18.55■□□□□ 0.56
PDLIM2-205ENST00000397761 MMADHCQ9H3L0 296 aaPredicted RBP18.55■□□□□ 0.56
PDLIM2-205ENST00000397761 LEF1Q9UJU2 399 aaPredicted RBP18.55■□□□□ 0.56
PDLIM2-205ENST00000397761 FXYD1O00168 92 aa18.54■□□□□ 0.56
PDLIM2-205ENST00000397761 RTCAO00442 366 aaKnown RBP18.54■□□□□ 0.56
PDLIM2-205ENST00000397761 SCAMP2O15127 329 aaKnown RBP18.54■□□□□ 0.56
PDLIM2-205ENST00000397761 KIF1CO43896 1103 aaKnown RBP18.54■□□□□ 0.56
PDLIM2-205ENST00000397761 SH3BP5O60239 455 aa18.54■□□□□ 0.56
PDLIM2-205ENST00000397761 DGKQP52824 942 aa18.54■□□□□ 0.56
PDLIM2-205ENST00000397761 TRA2BP62995 288 aaKnown RBP18.54■□□□□ 0.56
PDLIM2-205ENST00000397761 PHC1P78364 1004 aa18.54■□□□□ 0.56
PDLIM2-205ENST00000397761 SRSF11Q05519 484 aaKnown RBP18.54■□□□□ 0.56
PDLIM2-205ENST00000397761 ART3Q13508 389 aa18.54■□□□□ 0.56
PDLIM2-205ENST00000397761 PDE7AQ13946 482 aa18.54■□□□□ 0.56
PDLIM2-205ENST00000397761 CCDC6Q16204 474 aa18.54■□□□□ 0.56
PDLIM2-205ENST00000397761 ZC3H12BQ5HYM0 836 aaKnown RBP18.54■□□□□ 0.56
PDLIM2-205ENST00000397761 TCEAL6Q6IPX3 200 aa18.54■□□□□ 0.56
PDLIM2-205ENST00000397761 C16orf89Q6UX73 402 aa18.54■□□□□ 0.56
PDLIM2-205ENST00000397761 ZNF793Q6ZN11 406 aa18.54■□□□□ 0.56
PDLIM2-205ENST00000397761 FAM92BQ6ZTR7 304 aa18.54■□□□□ 0.56
PDLIM2-205ENST00000397761 ZCCHC7Q8N3Z6 543 aaKnown RBP18.54■□□□□ 0.56
PDLIM2-205ENST00000397761 SUMF1Q8NBK3 374 aa18.54■□□□□ 0.56
PDLIM2-205ENST00000397761 KCT2Q8NC54 265 aa18.54■□□□□ 0.56
PDLIM2-205ENST00000397761 OR8J2Q8NGG1 315 aa18.54■□□□□ 0.56
PDLIM2-205ENST00000397761 NAT6Q93015 286 aa18.54■□□□□ 0.56
PDLIM2-205ENST00000397761 TCEAL3Q969E4 200 aa18.54■□□□□ 0.56
PDLIM2-205ENST00000397761 MTERF3Q96E29 417 aa18.54■□□□□ 0.56
PDLIM2-205ENST00000397761 AHCYL2Q96HN2 611 aaKnown RBP18.54■□□□□ 0.56
PDLIM2-205ENST00000397761 ZNF285Q96NJ3 590 aa18.54■□□□□ 0.56
PDLIM2-205ENST00000397761 TGM7Q96PF1 710 aa18.54■□□□□ 0.56
PDLIM2-205ENST00000397761 C17orf62Q9BQA9 187 aa18.54■□□□□ 0.56
PDLIM2-205ENST00000397761 GTPBP2Q9BX10 602 aaKnown RBP18.54■□□□□ 0.56
PDLIM2-205ENST00000397761 ENAMQ9NRM1 1142 aa18.54■□□□□ 0.56
PDLIM2-205ENST00000397761 DNAAF2Q9NVR5 837 aaKnown RBP18.54■□□□□ 0.56
PDLIM2-205ENST00000397761 ATP6V1HQ9UI12 483 aa18.54■□□□□ 0.56
PDLIM2-205ENST00000397761 OTOGLQ3ZCN5 2332 aa18.54■□□□□ 0.56
PDLIM2-205ENST00000397761 MYO15AQ9UKN7 3530 aa18.53■□□□□ 0.56
PDLIM2-205ENST00000397761 LNP1A1A4G5 178 aa18.53■□□□□ 0.56
PDLIM2-205ENST00000397761 ERI3O43414 337 aaKnown RBP18.53■□□□□ 0.56
PDLIM2-205ENST00000397761 NPPAP01160 153 aa18.53■□□□□ 0.56
PDLIM2-205ENST00000397761 STATHP02808 62 aa18.53■□□□□ 0.56
PDLIM2-205ENST00000397761 GBAP04062 536 aa18.53■□□□□ 0.56
PDLIM2-205ENST00000397761 CKMT1AP12532 417 aa18.53■□□□□ 0.56
PDLIM2-205ENST00000397761 PLA2G16P53816 162 aa18.53■□□□□ 0.56
PDLIM2-205ENST00000397761 TGM3Q08188 693 aa18.53■□□□□ 0.56
PDLIM2-205ENST00000397761 PAGE3Q5JUK9 113 aa18.53■□□□□ 0.56
PDLIM2-205ENST00000397761 CCNYL2Q5T2Q4 361 aa18.53■□□□□ 0.56
PDLIM2-205ENST00000397761 GUSBP11Q6P575 273 aa18.53■□□□□ 0.56
PDLIM2-205ENST00000397761 TRIM40Q6P9F5 258 aa18.53■□□□□ 0.56
PDLIM2-205ENST00000397761 RIPOR1Q6ZS17 1223 aa18.53■□□□□ 0.56
PDLIM2-205ENST00000397761 PRSS42Q7Z5A4 293 aa18.53■□□□□ 0.56
PDLIM2-205ENST00000397761 DEFB107AQ8IZN7 70 aa18.53■□□□□ 0.56
PDLIM2-205ENST00000397761 UTP15Q8TED0 518 aaKnown RBP18.53■□□□□ 0.56
PDLIM2-205ENST00000397761 RERGQ96A58 199 aaPredicted RBP18.53■□□□□ 0.56
PDLIM2-205ENST00000397761 COQ8BQ96D53 544 aa18.53■□□□□ 0.56
PDLIM2-205ENST00000397761 ZNF764Q96H86 408 aaPredicted RBP18.53■□□□□ 0.56
PDLIM2-205ENST00000397761 RAB3IPQ96QF0 476 aaPredicted RBP18.53■□□□□ 0.56
PDLIM2-205ENST00000397761 GPATCH1Q9BRR8 931 aaKnown RBP18.53■□□□□ 0.56
PDLIM2-205ENST00000397761 WDR41Q9HAD4 459 aa18.53■□□□□ 0.56
PDLIM2-205ENST00000397761 DMDP11532 3685 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms