RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 MED17Q9NVC6 651 aa5.63□□□□□ -1.51
PTPRD-206ENST00000397617 ZNHIT2Q9UHR6 403 aa5.63□□□□□ -1.51
PTPRD-206ENST00000397617 SLC22A14Q9Y267 594 aa5.63□□□□□ -1.51
PTPRD-206ENST00000397617 ANKDD1BA6NHY2 528 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 CXCR6O00574 342 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 PCDH7O60245 1069 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 SRFP11831 508 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 CD53P19397 219 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 GK5Q6ZS86 529 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 LILRA2Q8N149 483 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 BIRC7Q96CA5 298 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 RPL10LQ96L21 214 aaKnown RBP5.62□□□□□ -1.51
PTPRD-206ENST00000397617 DHRS1Q96LJ7 313 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 STUB1Q9UNE7 303 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 PCDHGB5Q9Y5G0 923 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 SPTBN1Q01082 2364 aaKnown RBP5.62□□□□□ -1.51
PTPRD-206ENST00000397617 ANKHD1Q8IWZ3 2542 aaKnown RBP5.62□□□□□ -1.51
PTPRD-206ENST00000397617 CCL22O00626 93 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 ATXN3P54252 364 aaPredicted RBP5.62□□□□□ -1.51
PTPRD-206ENST00000397617 PSMD4P55036 377 aaKnown RBP5.62□□□□□ -1.51
PTPRD-206ENST00000397617 BBS10Q8TAM1 723 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 PYDC1Q8WXC3 89 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 SLC30A3Q99726 388 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 NLNQ9BYT8 704 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 EXD2Q9NVH0 621 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 CLEC4EQ9ULY5 219 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 PCDHGB6Q9Y5F9 930 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 E9PQ18 207 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 CPNE6O95741 557 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 C9P02748 559 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 FURINP09958 794 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 ATP6V1B2P21281 511 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 HTR6P50406 440 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 CTSCP53634 463 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 EPHA4P54764 986 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 MRM1Q6IN84 353 aaKnown RBP5.62□□□□□ -1.51
PTPRD-206ENST00000397617 APOLD1Q96LR9 279 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 Q96MT0 163 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 NSUN5Q96P11 429 aaKnown RBP5.62□□□□□ -1.51
PTPRD-206ENST00000397617 APOL5Q9BWW9 433 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 REEP1Q9H902 201 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 SARS2Q9NP81 518 aaKnown RBP5.62□□□□□ -1.51
PTPRD-206ENST00000397617 USP36Q9P275 1121 aaKnown RBP5.62□□□□□ -1.51
PTPRD-206ENST00000397617 ENPP4Q9Y6X5 453 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 RTTNQ86VV8 2226 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 A0A1W2PRQ8 180 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 H3BNH8 94 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 POLR1CO15160 346 aaPredicted RBP5.62□□□□□ -1.51
PTPRD-206ENST00000397617 MAP3K13O43283 966 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 PRKD3O94806 890 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 TPPPO94811 219 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 FHP07954 510 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 JUNDP17535 347 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 RHCEP18577 417 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 DGCR6Q14129 220 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 FAM117BQ6P1L5 589 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 RNF111Q6ZNA4 994 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 HEATR4Q86WZ0 1026 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 SNX31Q8N9S9 440 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 OR2L5Q8NG80 312 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 HUS1BQ8NHY5 278 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 NT5CQ8TCD5 201 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 PPCDCQ96CD2 204 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 MPP4Q96JB8 637 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 HRASLS5Q96KN8 279 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 ZNF285Q96NJ3 590 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 ARMC7Q9H6L4 198 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 KLHL28Q9NXS3 571 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 ACACBO00763 2458 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 PDE5AO76074 875 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 BAG2O95816 211 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 THBS1P07996 1170 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 TLX1P31314 330 aaPredicted RBP5.62□□□□□ -1.51
PTPRD-206ENST00000397617 DCTP40126 519 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 MEDAGQ5VYS4 303 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 ZNF773Q6PK81 442 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 ARL10Q8N8L6 244 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 TSPAN14Q8NG11 270 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 PYURFQ96I23 114 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 GABARAPL3Q9BY60 117 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 S1PR5Q9H228 398 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 A4GALTQ9NPC4 353 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 FPGTO14772 594 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 PIPP12273 146 aaPredicted RBP5.62□□□□□ -1.51
PTPRD-206ENST00000397617 PRDX3P30048 256 aaKnown RBP5.62□□□□□ -1.51
PTPRD-206ENST00000397617 CMPK1P30085 196 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 IL12RB1P42701 662 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 FOLH1Q04609 750 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 SLC30A9Q6PML9 568 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 C17orf82Q86X59 251 aaPredicted RBP5.62□□□□□ -1.51
PTPRD-206ENST00000397617 PHF10Q8WUB8 498 aaKnown RBP5.62□□□□□ -1.51
PTPRD-206ENST00000397617 THRSPQ92748 146 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 FCRL4Q96PJ5 515 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 SLC6A16Q9GZN6 736 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 TNFRSF12AQ9NP84 129 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 ISYNA1Q9NPH2 558 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 MIEF1Q9NQG6 463 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 PACSIN3Q9UKS6 424 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 SCN3AQ9NY46 2000 aa5.62□□□□□ -1.51
PTPRD-206ENST00000397617 SRCAPQ6ZRS2 3230 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms