RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 SMIM10Q96HG1 83 aa22.42■■□□□ 1.18
TSPAN4-203ENST00000397397 KCNC2Q96PR1 638 aa22.42■■□□□ 1.18
TSPAN4-203ENST00000397397 C17orf62Q9BQA9 187 aa22.42■■□□□ 1.18
TSPAN4-203ENST00000397397 MRPL1Q9BYD6 325 aaKnown RBP22.42■■□□□ 1.18
TSPAN4-203ENST00000397397 MEAF6Q9HAF1 191 aa22.42■■□□□ 1.18
TSPAN4-203ENST00000397397 ANKHQ9HCJ1 492 aa22.42■■□□□ 1.18
TSPAN4-203ENST00000397397 RIC8BQ9NVN3 520 aa22.42■■□□□ 1.18
TSPAN4-203ENST00000397397 AHSPQ9NZD4 102 aa22.42■■□□□ 1.18
TSPAN4-203ENST00000397397 DHCR7Q9UBM7 475 aaKnown RBP22.42■■□□□ 1.18
TSPAN4-203ENST00000397397 CCL27Q9Y4X3 112 aa22.42■■□□□ 1.18
TSPAN4-203ENST00000397397 PCDHGA3Q9Y5H0 932 aa22.42■■□□□ 1.18
TSPAN4-203ENST00000397397 SCN3AQ9NY46 2000 aa22.42■■□□□ 1.18
TSPAN4-203ENST00000397397 ATP6AP2A0A1C7CYW4 349 aa22.41■■□□□ 1.18
TSPAN4-203ENST00000397397 RTCAO00442 366 aaKnown RBP22.41■■□□□ 1.18
TSPAN4-203ENST00000397397 PLPP1O14494 284 aa22.41■■□□□ 1.18
TSPAN4-203ENST00000397397 DSCR3O14972 297 aa22.41■■□□□ 1.18
TSPAN4-203ENST00000397397 ATP6AP2O75787 350 aa22.41■■□□□ 1.18
TSPAN4-203ENST00000397397 RSL1D1O76021 490 aaKnown RBP22.41■■□□□ 1.18
TSPAN4-203ENST00000397397 KIAA0754O94854 1291 aa22.41■■□□□ 1.18
TSPAN4-203ENST00000397397 B3GALT4O96024 378 aa22.41■■□□□ 1.18
TSPAN4-203ENST00000397397 ZNF28P17035 718 aa22.41■■□□□ 1.18
TSPAN4-203ENST00000397397 IL1RNP18510 177 aa22.41■■□□□ 1.18
TSPAN4-203ENST00000397397 RBMS1P29558 406 aaKnown RBP22.41■■□□□ 1.18
TSPAN4-203ENST00000397397 BTN3A2P78410 334 aa22.41■■□□□ 1.18
TSPAN4-203ENST00000397397 FAM53BQ14153 422 aa22.41■■□□□ 1.18
TSPAN4-203ENST00000397397 DEFB134Q4QY38 66 aa22.41■■□□□ 1.18
TSPAN4-203ENST00000397397 VWA5B1Q5TIE3 1220 aa22.41■■□□□ 1.18
TSPAN4-203ENST00000397397 RHBDD2Q6NTF9 364 aa22.41■■□□□ 1.18
TSPAN4-203ENST00000397397 MAVSQ7Z434 540 aa22.41■■□□□ 1.18
TSPAN4-203ENST00000397397 MTERF4Q7Z6M4 381 aaKnown RBP22.41■■□□□ 1.18
TSPAN4-203ENST00000397397 TUBGCP3Q96CW5 907 aa22.41■■□□□ 1.18
TSPAN4-203ENST00000397397 ULBP3Q9BZM4 244 aa22.41■■□□□ 1.18
TSPAN4-203ENST00000397397 NPHS2Q9NP85 383 aa22.41■■□□□ 1.18
TSPAN4-203ENST00000397397 ADAM21Q9UKJ8 722 aa22.41■■□□□ 1.18
TSPAN4-203ENST00000397397 A0A0A6YYC8 382 aaPredicted RBP22.4■■□□□ 1.18
TSPAN4-203ENST00000397397 I3L1I5 382 aaPredicted RBP22.4■■□□□ 1.18
TSPAN4-203ENST00000397397 ZNF195O14628 629 aa22.4■■□□□ 1.18
TSPAN4-203ENST00000397397 CPNE3O75131 537 aaKnown RBP22.4■■□□□ 1.18
TSPAN4-203ENST00000397397 TGDSO95455 350 aa22.4■■□□□ 1.18
TSPAN4-203ENST00000397397 TROVE2P10155 538 aaKnown RBP eCLIP22.4■■□□□ 1.18
TSPAN4-203ENST00000397397 SEC24CP53992 1094 aa22.4■■□□□ 1.18
TSPAN4-203ENST00000397397 TBL3Q12788 808 aaKnown RBP22.4■■□□□ 1.18
TSPAN4-203ENST00000397397 CAMK2BQ13554 666 aa22.4■■□□□ 1.18
TSPAN4-203ENST00000397397 AP5B1Q2VPB7 878 aa22.4■■□□□ 1.18
TSPAN4-203ENST00000397397 TUBB8Q3ZCM7 444 aa22.4■■□□□ 1.18
TSPAN4-203ENST00000397397 GALNTL6Q49A17 601 aa22.4■■□□□ 1.18
TSPAN4-203ENST00000397397 C1orf189Q5VU69 101 aa22.4■■□□□ 1.18
TSPAN4-203ENST00000397397 OR4C11Q6IEV9 310 aa22.4■■□□□ 1.18
TSPAN4-203ENST00000397397 PRSS41Q7RTY9 318 aa22.4■■□□□ 1.18
TSPAN4-203ENST00000397397 METTL4Q8N3J2 472 aa22.4■■□□□ 1.18
TSPAN4-203ENST00000397397 DTWD1Q8N5C7 304 aa22.4■■□□□ 1.18
TSPAN4-203ENST00000397397 METTL27Q8N6F8 245 aaPredicted RBP22.4■■□□□ 1.18
TSPAN4-203ENST00000397397 OR9A4Q8NGU2 314 aa22.4■■□□□ 1.18
TSPAN4-203ENST00000397397 APIPQ96GX9 242 aa22.4■■□□□ 1.18
TSPAN4-203ENST00000397397 CNTNAP3BQ96NU0 1288 aa22.4■■□□□ 1.18
TSPAN4-203ENST00000397397 TBCDQ9BTW9 1192 aa22.4■■□□□ 1.18
TSPAN4-203ENST00000397397 SCNM1Q9BWG6 230 aa22.4■■□□□ 1.18
TSPAN4-203ENST00000397397 SORBS1Q9BX66 1292 aaKnown RBP22.4■■□□□ 1.18
TSPAN4-203ENST00000397397 TRIM55Q9BYV6 548 aa22.4■■□□□ 1.18
TSPAN4-203ENST00000397397 CNTNAP3Q9BZ76 1288 aa22.4■■□□□ 1.18
TSPAN4-203ENST00000397397 NRSN2Q9GZP1 204 aa22.4■■□□□ 1.18
TSPAN4-203ENST00000397397 COPS7BQ9H9Q2 264 aaPredicted RBP22.4■■□□□ 1.18
TSPAN4-203ENST00000397397 LRTM1Q9HBL6 345 aa22.4■■□□□ 1.18
TSPAN4-203ENST00000397397 PRDM7Q9NQW5 492 aa22.4■■□□□ 1.18
TSPAN4-203ENST00000397397 NAALAD2Q9Y3Q0 740 aa22.4■■□□□ 1.18
TSPAN4-203ENST00000397397 A0A088AWK7 358 aa22.4■■□□□ 1.18
TSPAN4-203ENST00000397397 GMNCA6NCL1 334 aa22.4■■□□□ 1.18
TSPAN4-203ENST00000397397 SDHDO14521 159 aa22.4■■□□□ 1.18
TSPAN4-203ENST00000397397 FOXS1O43638 330 aa22.4■■□□□ 1.18
TSPAN4-203ENST00000397397 KLHL18O94889 574 aa22.4■■□□□ 1.18
TSPAN4-203ENST00000397397 ALOX15P16050 662 aaPredicted RBP22.4■■□□□ 1.18
TSPAN4-203ENST00000397397 ZNF10P21506 573 aaPredicted RBP22.4■■□□□ 1.18
TSPAN4-203ENST00000397397 PRPH2P23942 346 aa22.4■■□□□ 1.18
TSPAN4-203ENST00000397397 SSR2P43308 183 aa22.4■■□□□ 1.18
TSPAN4-203ENST00000397397 AVPR1BP47901 424 aa22.4■■□□□ 1.18
TSPAN4-203ENST00000397397 ACSM2AQ08AH3 577 aa22.4■■□□□ 1.18
TSPAN4-203ENST00000397397 ACSM2BQ68CK6 577 aa22.4■■□□□ 1.18
TSPAN4-203ENST00000397397 C1orf52Q8N6N3 182 aaKnown RBP22.4■■□□□ 1.18
TSPAN4-203ENST00000397397 SLC38A9Q8NBW4 561 aa22.4■■□□□ 1.18
TSPAN4-203ENST00000397397 CHTF18Q8WVB6 975 aa22.4■■□□□ 1.18
TSPAN4-203ENST00000397397 PPP3R2Q96LZ3 170 aa22.4■■□□□ 1.18
TSPAN4-203ENST00000397397 SLC46A1Q96NT5 459 aa22.4■■□□□ 1.18
TSPAN4-203ENST00000397397 B3GNT4Q9C0J1 378 aa22.4■■□□□ 1.18
TSPAN4-203ENST00000397397 C1orf109Q9NX04 203 aa22.4■■□□□ 1.18
TSPAN4-203ENST00000397397 FOXJ2Q9P0K8 574 aa22.4■■□□□ 1.18
TSPAN4-203ENST00000397397 GIMAP2Q9UG22 337 aa22.4■■□□□ 1.18
TSPAN4-203ENST00000397397 A0A1B0GX78 115 aa22.39■■□□□ 1.17
TSPAN4-203ENST00000397397 LSM1O15116 133 aaKnown RBP22.39■■□□□ 1.17
TSPAN4-203ENST00000397397 GALR3O60755 368 aaPredicted RBP22.39■■□□□ 1.17
TSPAN4-203ENST00000397397 DIAPH2O60879 1101 aa22.39■■□□□ 1.17
TSPAN4-203ENST00000397397 PEX11AO75192 247 aa22.39■■□□□ 1.17
TSPAN4-203ENST00000397397 VPS4BO75351 444 aa22.39■■□□□ 1.17
TSPAN4-203ENST00000397397 SEC22BO75396 215 aa22.39■■□□□ 1.17
TSPAN4-203ENST00000397397 BSGP35613 385 aa22.39■■□□□ 1.17
TSPAN4-203ENST00000397397 ARFIP1P53367 373 aa22.39■■□□□ 1.17
TSPAN4-203ENST00000397397 AQP5P55064 265 aa22.39■■□□□ 1.17
TSPAN4-203ENST00000397397 SKP1P63208 163 aa22.39■■□□□ 1.17
TSPAN4-203ENST00000397397 SLC9B1Q4ZJI4 515 aa22.39■■□□□ 1.17
TSPAN4-203ENST00000397397 SPIN4Q56A73 249 aa22.39■■□□□ 1.17
TSPAN4-203ENST00000397397 CGB2Q6NT52 195 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms