RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 GRPRP30550 384 aa16.86■□□□□ 0.29
MCF2L-208ENST00000397030 SYT16Q17RD7 645 aa16.86■□□□□ 0.29
MCF2L-208ENST00000397030 RNF130Q86XS8 419 aa16.86■□□□□ 0.29
MCF2L-208ENST00000397030 PQLC1Q8N2U9 271 aa16.86■□□□□ 0.29
MCF2L-208ENST00000397030 POLR2J2Q9GZM3 115 aaKnown RBP16.86■□□□□ 0.29
MCF2L-208ENST00000397030 OR10A4Q9H209 315 aa16.86■□□□□ 0.29
MCF2L-208ENST00000397030 CAPN8A6NHC0 703 aa16.86■□□□□ 0.29
MCF2L-208ENST00000397030 H2BFMP0C1H6 154 aa16.86■□□□□ 0.29
MCF2L-208ENST00000397030 VAMP1P23763 118 aa16.86■□□□□ 0.29
MCF2L-208ENST00000397030 EDNRBP24530 442 aa16.86■□□□□ 0.29
MCF2L-208ENST00000397030 GGT5P36269 586 aa16.86■□□□□ 0.29
MCF2L-208ENST00000397030 LRIF1Q5T3J3 769 aa16.86■□□□□ 0.29
MCF2L-208ENST00000397030 AGTRAPQ6RW13 159 aa16.86■□□□□ 0.29
MCF2L-208ENST00000397030 SHISA6Q6ZSJ9 500 aa16.86■□□□□ 0.29
MCF2L-208ENST00000397030 Q6ZVL8 140 aa16.86■□□□□ 0.29
MCF2L-208ENST00000397030 CCDC86Q9H6F5 360 aaKnown RBP16.86■□□□□ 0.29
MCF2L-208ENST00000397030 SEMA3DO95025 777 aa16.85■□□□□ 0.29
MCF2L-208ENST00000397030 MT-ND5P03915 603 aa16.85■□□□□ 0.29
MCF2L-208ENST00000397030 CD53P19397 219 aa16.85■□□□□ 0.29
MCF2L-208ENST00000397030 HHEXQ03014 270 aa16.85■□□□□ 0.29
MCF2L-208ENST00000397030 CDKL4Q5MAI5 379 aa16.85■□□□□ 0.29
MCF2L-208ENST00000397030 LYSMD4Q5XG99 296 aa16.85■□□□□ 0.29
MCF2L-208ENST00000397030 S100A14Q9HCY8 104 aa16.85■□□□□ 0.29
MCF2L-208ENST00000397030 AMBNQ9NP70 447 aa16.85■□□□□ 0.29
MCF2L-208ENST00000397030 FABP12A6NFH5 140 aa16.85■□□□□ 0.29
MCF2L-208ENST00000397030 ZNF217O75362 1048 aa16.85■□□□□ 0.29
MCF2L-208ENST00000397030 CBSLP0DN79 551 aa16.85■□□□□ 0.29
MCF2L-208ENST00000397030 CBSP35520 551 aa16.85■□□□□ 0.29
MCF2L-208ENST00000397030 SNX29P2Q8IUI4 249 aa16.85■□□□□ 0.29
MCF2L-208ENST00000397030 SVOPLQ8N434 492 aa16.85■□□□□ 0.29
MCF2L-208ENST00000397030 CSNK1A1LQ8N752 337 aa16.85■□□□□ 0.29
MCF2L-208ENST00000397030 CLEC1AQ8NC01 280 aa16.85■□□□□ 0.29
MCF2L-208ENST00000397030 TMEM234Q8WY98 164 aa16.85■□□□□ 0.29
MCF2L-208ENST00000397030 SPOCK2Q92563 424 aa16.85■□□□□ 0.29
MCF2L-208ENST00000397030 FCRL5Q96RD9 977 aa16.85■□□□□ 0.29
MCF2L-208ENST00000397030 CD180Q99467 661 aa16.85■□□□□ 0.29
MCF2L-208ENST00000397030 PCDHGB2Q9Y5G2 931 aa16.85■□□□□ 0.29
MCF2L-208ENST00000397030 DGKQP52824 942 aa16.85■□□□□ 0.29
MCF2L-208ENST00000397030 GPR17Q13304 367 aa16.85■□□□□ 0.29
MCF2L-208ENST00000397030 ADGRD2Q7Z7M1 963 aa16.85■□□□□ 0.29
MCF2L-208ENST00000397030 NRROSQ86YC3 692 aa16.85■□□□□ 0.29
MCF2L-208ENST00000397030 PLXDC1Q8IUK5 500 aa16.85■□□□□ 0.29
MCF2L-208ENST00000397030 LGI4Q8N135 537 aa16.85■□□□□ 0.29
MCF2L-208ENST00000397030 OR9K2Q8NGE7 335 aa16.85■□□□□ 0.29
MCF2L-208ENST00000397030 CITED4Q96RK1 184 aa16.85■□□□□ 0.29
MCF2L-208ENST00000397030 IGLV3-22A0A075B6J6 115 aa16.85■□□□□ 0.29
MCF2L-208ENST00000397030 YY2O15391 372 aa16.85■□□□□ 0.29
MCF2L-208ENST00000397030 LHCGRP22888 699 aa16.85■□□□□ 0.29
MCF2L-208ENST00000397030 PGM2L1Q6PCE3 622 aa16.85■□□□□ 0.29
MCF2L-208ENST00000397030 SP140LQ9H930 580 aa16.85■□□□□ 0.29
MCF2L-208ENST00000397030 USP29Q9HBJ7 922 aa16.85■□□□□ 0.29
MCF2L-208ENST00000397030 UCKL1Q9NWZ5 548 aa16.85■□□□□ 0.29
MCF2L-208ENST00000397030 CCDC163A0A0D9SF12 145 aa16.85■□□□□ 0.29
MCF2L-208ENST00000397030 ASGR2P07307 311 aa16.85■□□□□ 0.29
MCF2L-208ENST00000397030 DEFB134Q4QY38 66 aa16.85■□□□□ 0.29
MCF2L-208ENST00000397030 C3orf38Q5JPI3 329 aa16.85■□□□□ 0.29
MCF2L-208ENST00000397030 MARCH9Q86YJ5 346 aa16.85■□□□□ 0.29
MCF2L-208ENST00000397030 TICAM1Q8IUC6 712 aa16.85■□□□□ 0.29
MCF2L-208ENST00000397030 PRR18Q8N4B5 295 aa16.85■□□□□ 0.29
MCF2L-208ENST00000397030 TRIM43Q96BQ3 446 aaPredicted RBP16.85■□□□□ 0.29
MCF2L-208ENST00000397030 SCGB2A1O75556 95 aa16.84■□□□□ 0.29
MCF2L-208ENST00000397030 RCAN2Q14206 197 aa16.84■□□□□ 0.29
MCF2L-208ENST00000397030 DUOXA1Q1HG43 343 aa16.84■□□□□ 0.29
MCF2L-208ENST00000397030 RAB43Q86YS6 212 aa16.84■□□□□ 0.29
MCF2L-208ENST00000397030 OR4F6Q8NGB9 312 aa16.84■□□□□ 0.29
MCF2L-208ENST00000397030 BARD1Q99728 777 aaKnown RBP16.84■□□□□ 0.29
MCF2L-208ENST00000397030 C8orf4Q9NR00 106 aa16.84■□□□□ 0.29
MCF2L-208ENST00000397030 SMIM30A4D0T7 59 aa16.84■□□□□ 0.29
MCF2L-208ENST00000397030 PON3Q15166 354 aa16.84■□□□□ 0.29
MCF2L-208ENST00000397030 KIAA0930Q6ICG6 404 aaPredicted RBP16.84■□□□□ 0.29
MCF2L-208ENST00000397030 ARSKQ6UWY0 536 aa16.84■□□□□ 0.29
MCF2L-208ENST00000397030 RAB8BQ92930 207 aa16.84■□□□□ 0.29
MCF2L-208ENST00000397030 PGAM5Q96HS1 289 aa16.84■□□□□ 0.29
MCF2L-208ENST00000397030 PRODH2Q9UF12 536 aa16.84■□□□□ 0.29
MCF2L-208ENST00000397030 CICQ96RK0 1608 aaPredicted RBP16.84■□□□□ 0.29
MCF2L-208ENST00000397030 CD79AP11912 226 aa16.84■□□□□ 0.29
MCF2L-208ENST00000397030 CNEP1R1Q8N9A8 125 aa16.84■□□□□ 0.29
MCF2L-208ENST00000397030 TOR1AIP2Q8NFQ8 470 aa16.84■□□□□ 0.29
MCF2L-208ENST00000397030 SCAMP4Q969E2 229 aa16.84■□□□□ 0.29
MCF2L-208ENST00000397030 SLC6A15Q9H2J7 730 aa16.84■□□□□ 0.29
MCF2L-208ENST00000397030 MUC13Q9H3R2 512 aa16.84■□□□□ 0.29
MCF2L-208ENST00000397030 EIF2B3Q9NR50 452 aaKnown RBP16.84■□□□□ 0.29
MCF2L-208ENST00000397030 NPHS1O60500 1241 aa16.84■□□□□ 0.29
MCF2L-208ENST00000397030 PDYNP01213 254 aa16.84■□□□□ 0.29
MCF2L-208ENST00000397030 NSDHLQ15738 373 aa16.84■□□□□ 0.29
MCF2L-208ENST00000397030 WDR12Q9GZL7 423 aaKnown RBP16.84■□□□□ 0.29
MCF2L-208ENST00000397030 IGSF9Q9P2J2 1179 aa16.84■□□□□ 0.29
MCF2L-208ENST00000397030 NUFIP1Q9UHK0 495 aaKnown RBP16.84■□□□□ 0.29
MCF2L-208ENST00000397030 M0R129 80 aa16.84■□□□□ 0.29
MCF2L-208ENST00000397030 NTSR1P30989 418 aa16.84■□□□□ 0.29
MCF2L-208ENST00000397030 DHCR24Q15392 516 aa16.84■□□□□ 0.29
MCF2L-208ENST00000397030 CST6Q15828 149 aa16.84■□□□□ 0.29
MCF2L-208ENST00000397030 PTCHD3Q3KNS1 767 aa16.84■□□□□ 0.29
MCF2L-208ENST00000397030 ALG10BQ5I7T1 473 aa16.84■□□□□ 0.29
MCF2L-208ENST00000397030 ERI1Q8IV48 349 aaKnown RBP16.84■□□□□ 0.29
MCF2L-208ENST00000397030 PGAM4Q8N0Y7 254 aa16.84■□□□□ 0.29
MCF2L-208ENST00000397030 ZNF709Q8N972 641 aa16.84■□□□□ 0.29
MCF2L-208ENST00000397030 AQP11Q8NBQ7 271 aa16.84■□□□□ 0.29
MCF2L-208ENST00000397030 CEP76Q8TAP6 659 aa16.84■□□□□ 0.29
MCF2L-208ENST00000397030 ACOT12Q8WYK0 555 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms