RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 GRPEL2Q8TAA5 225 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 ITFG1Q8TB96 612 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 ASZ1Q8WWH4 475 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 FGF13Q92913 245 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 RNF170Q96K19 258 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 SPON2Q9BUD6 331 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 DGCR6LQ9BY27 220 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 PBX4Q9BYU1 374 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 PCBD2Q9H0N5 130 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 ING2Q9H160 280 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 OR52A5Q9H2C5 316 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 ALG9Q9H6U8 611 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 RUBCNLQ9H714 662 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 AKTIPQ9H8T0 292 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 UCK1Q9HA47 277 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 TM9SF3Q9HD45 589 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 FKBP14Q9NWM8 211 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 ICKQ9UPZ9 632 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 PCDHB3Q9Y5E6 796 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 IGLON5A6NGN9 336 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 SHISA7A6NL88 538 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 UBXN8O00124 270 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 TNFRSF10CO14798 259 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 POLR1CO15160 346 aaPredicted RBP5.16□□□□□ -1.58
VPS41-203ENST00000395969 SHOXO15266 292 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 PRICKLE3O43900 615 aaPredicted RBP5.16□□□□□ -1.58
VPS41-203ENST00000395969 OR1I1O60431 355 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 LEFTY1O75610 366 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 LDLRP01130 860 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 IL6P05231 212 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 THRBP10828 461 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 LAMP2P13473 410 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 ADRB3P13945 408 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 NAGAP17050 411 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 CTRB1P17538 263 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 POLR2CP19387 275 aaPredicted RBP5.16□□□□□ -1.58
VPS41-203ENST00000395969 SLC6A2P23975 617 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 DDOSTP39656 456 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 TSPAN7P41732 249 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 RECQLP46063 649 aaPredicted RBP5.16□□□□□ -1.58
VPS41-203ENST00000395969 EIF1AXP47813 144 aaKnown RBP5.16□□□□□ -1.58
VPS41-203ENST00000395969 CLDN8P56748 225 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 PFN3P60673 137 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 YBX1P67809 324 aaKnown RBP5.16□□□□□ -1.58
VPS41-203ENST00000395969 EMX1Q04741 257 aaPredicted RBP5.16□□□□□ -1.58
VPS41-203ENST00000395969 DAG1Q14118 895 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 ZNF460Q14592 562 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 TSNQ15631 228 aaKnown RBP5.16□□□□□ -1.58
VPS41-203ENST00000395969 CEBPEQ15744 281 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 CYP51A1Q16850 503 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 PLA2G4EQ3MJ16 856 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 ATP13A5Q4VNC0 1218 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 USP39Q53GS9 565 aaKnown RBP5.16□□□□□ -1.58
VPS41-203ENST00000395969 YIF1BQ5BJH7 314 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 AGBL4Q5VU57 503 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 CTRB2Q6GPI1 263 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 LAYNQ6UX15 382 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 LYPD8Q6UX82 237 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 DLEU7Q6UYE1 221 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 GRASPQ7Z6J2 395 aaPredicted RBP5.16□□□□□ -1.58
VPS41-203ENST00000395969 PROSER1Q86XN7 944 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 POC5Q8NA72 575 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 SIDT2Q8NBJ9 832 aaKnown RBP5.16□□□□□ -1.58
VPS41-203ENST00000395969 TP53I13Q8NBR0 393 aaPredicted RBP5.16□□□□□ -1.58
VPS41-203ENST00000395969 PJA1Q8NG27 643 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 OR9I1Q8NGQ6 314 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 LKAAEAR1Q8TD35 194 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 SMG7Q92540 1137 aaKnown RBP5.16□□□□□ -1.58
VPS41-203ENST00000395969 ARRDC3Q96B67 414 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 COQ8BQ96D53 544 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 ATXN7L3BQ96GX2 97 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 ST6GAL2Q96JF0 529 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 RIPOR3Q96MK2 946 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 CIPCQ9C0C6 399 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 CHST8Q9H2A9 424 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 ASB8Q9H765 288 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 PRSS16Q9NQE7 514 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 ATP6V1HQ9UI12 483 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 GTF2A1LQ9UNN4 478 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 AGAP5A6NIR3 686 aa5.15□□□□□ -1.58
VPS41-203ENST00000395969 HEPACAM2A8MVW5 462 aa5.15□□□□□ -1.58
VPS41-203ENST00000395969 C1QTNF3-AMACRE9PGA6 284 aa5.15□□□□□ -1.58
VPS41-203ENST00000395969 CDC7O00311 574 aa5.15□□□□□ -1.58
VPS41-203ENST00000395969 SLC1A7O00341 560 aa5.15□□□□□ -1.58
VPS41-203ENST00000395969 ATG13O75143 517 aa5.15□□□□□ -1.58
VPS41-203ENST00000395969 NIPSNAP2O75323 286 aa5.15□□□□□ -1.58
VPS41-203ENST00000395969 SCELO95171 688 aa5.15□□□□□ -1.58
VPS41-203ENST00000395969 RASGRP1O95267 797 aa5.15□□□□□ -1.58
VPS41-203ENST00000395969 DLGAP3O95886 979 aa5.15□□□□□ -1.58
VPS41-203ENST00000395969 DBTP11182 482 aaKnown RBP5.15□□□□□ -1.58
VPS41-203ENST00000395969 HGFP14210 728 aa5.15□□□□□ -1.58
VPS41-203ENST00000395969 CD6P30203 668 aa5.15□□□□□ -1.58
VPS41-203ENST00000395969 FMO4P31512 558 aa5.15□□□□□ -1.58
VPS41-203ENST00000395969 DRD3P35462 400 aa5.15□□□□□ -1.58
VPS41-203ENST00000395969 CCR5P51681 352 aa5.15□□□□□ -1.58
VPS41-203ENST00000395969 VBP1P61758 197 aa5.15□□□□□ -1.58
VPS41-203ENST00000395969 KRR1Q13601 381 aaKnown RBP5.15□□□□□ -1.58
VPS41-203ENST00000395969 PROX2Q3B8N5 592 aa5.15□□□□□ -1.58
VPS41-203ENST00000395969 OXLD1Q5BKU9 147 aa5.15□□□□□ -1.58
VPS41-203ENST00000395969 C6orf136Q5SQH8 315 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms