RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 HOXD12P35452 270 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 CTSKP43235 329 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 FBXW4P57775 412 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 ADGRE1Q14246 886 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 RBM48Q5RL73 367 aaKnown RBP3.26□□□□□ -1.89
VPS13C-203ENST00000395896 CATSPEREQ5SY80 951 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 PTRH1Q86Y79 214 aaKnown RBP3.26□□□□□ -1.89
VPS13C-203ENST00000395896 KBTBD2Q8IY47 623 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 IPCEF1Q8WWN9 437 aaPredicted RBP3.26□□□□□ -1.89
VPS13C-203ENST00000395896 PHF7Q9BWX1 381 aaPredicted RBP3.26□□□□□ -1.89
VPS13C-203ENST00000395896 IL21Q9HBE4 155 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 BTNL2Q9UIR0 455 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 PADI2Q9Y2J8 665 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 GPR45Q9Y5Y3 372 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 HTTP42858 3142 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 LSM1O15116 133 aaKnown RBP3.26□□□□□ -1.89
VPS13C-203ENST00000395896 ERI3O43414 337 aaKnown RBP3.26□□□□□ -1.89
VPS13C-203ENST00000395896 C1orf105O95561 183 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 IGFBP5P24593 272 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 MRPL19P49406 292 aaKnown RBP3.26□□□□□ -1.89
VPS13C-203ENST00000395896 CENPAP49450 140 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 DAB2P98082 770 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 POM121L1PQ3SYA9 428 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 KANK2Q63ZY3 851 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 ANO7Q6IWH7 933 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 CEACAM20Q6UY09 585 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 ZNF550Q7Z398 422 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 C1orf52Q8N6N3 182 aaKnown RBP3.26□□□□□ -1.89
VPS13C-203ENST00000395896 MFSD2AQ8NA29 543 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 OR4A15Q8NGL6 344 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 TEX47Q8TBZ9 253 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 IGLON5A6NGN9 336 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 MANBAO00462 879 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 HMGN1P05114 100 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 PCCBP05166 539 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 EIF2S1P05198 315 aaKnown RBP3.26□□□□□ -1.89
VPS13C-203ENST00000395896 CCNYL3P0C7X3 344 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 PABPC4LP0CB38 370 aaKnown RBP3.26□□□□□ -1.89
VPS13C-203ENST00000395896 RNH1P13489 461 aaKnown RBP3.26□□□□□ -1.89
VPS13C-203ENST00000395896 TAS2R41P59536 307 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 CDK3Q00526 305 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 FAM78AQ5JUQ0 283 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 OR4C6Q8NH72 309 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 FBXO30Q8TB52 745 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 HBEGFQ99075 208 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 POLR1BQ9H9Y6 1135 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 PELI2Q9HAT8 420 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 RABL2AQ9UBK7 228 aaPredicted RBP3.26□□□□□ -1.89
VPS13C-203ENST00000395896 RABL2BQ9UNT1 228 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 PCDHGB5Q9Y5G0 923 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 HIDE1A8MVS5 230 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 C9J4A7 227 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 MID1O15344 667 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 DUX1O43812 170 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 OXSR1O95747 527 aaPredicted RBP3.26□□□□□ -1.89
VPS13C-203ENST00000395896 RHCEP18577 417 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 KCNA5P22460 613 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 GMPRP36959 345 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 VIPR2P41587 438 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 MERTKQ12866 999 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 DOC2AQ14183 400 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 ADIPOR2Q86V24 386 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 ZNF440Q8IYI8 595 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 CBR4Q8N4T8 237 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 TMEM145Q8NBT3 493 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 LRRN4Q8WUT4 740 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 XAGE5Q8WWM1 108 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 MPP4Q96JB8 637 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 NODALQ96S42 347 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 COQ7Q99807 217 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 DPH2Q9BQC3 489 aaPredicted RBP3.26□□□□□ -1.89
VPS13C-203ENST00000395896 WDR12Q9GZL7 423 aaKnown RBP3.26□□□□□ -1.89
VPS13C-203ENST00000395896 RSPH9Q9H1X1 276 aaPredicted RBP3.26□□□□□ -1.89
VPS13C-203ENST00000395896 WNK1Q9H4A3 2382 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 UTS2RQ9UKP6 389 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 RPL36Q9Y3U8 105 aaKnown RBP3.26□□□□□ -1.89
VPS13C-203ENST00000395896 HMX2A2RU54 273 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 CENPXA8MT69 81 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 K7ERQ8 282 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 PCDH17O14917 1159 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 OR1I1O60431 355 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 PSIP1O75475 530 aaKnown RBP3.26□□□□□ -1.89
VPS13C-203ENST00000395896 HOXC4P09017 264 aaPredicted RBP3.26□□□□□ -1.89
VPS13C-203ENST00000395896 TAS2R50P59544 299 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 DSTNP60981 165 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 DCTN2Q13561 401 aaKnown RBP3.26□□□□□ -1.89
VPS13C-203ENST00000395896 KHDRBS2Q5VWX1 349 aaKnown RBP3.26□□□□□ -1.89
VPS13C-203ENST00000395896 TRAF7Q6Q0C0 670 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 ZNF683Q8IZ20 524 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 ZNF540Q8NDQ6 660 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 HOXD1Q9GZZ0 328 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 NUAK2Q9H093 628 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 ZNF576Q9H609 170 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 NT5DC2Q9H857 520 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 SDHAF3Q9NRP4 125 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 ABI3Q9P2A4 366 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 HCN4Q9Y3Q4 1203 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 SPIN1Q9Y657 262 aaPredicted RBP3.26□□□□□ -1.89
VPS13C-203ENST00000395896 GFYI3L273 518 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 ITM2AO43736 263 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms