RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 DUSP3P51452 185 aaPredicted RBP19.44■□□□□ 0.7
VCPKMT-202ENST00000395860 DGKQP52824 942 aa19.44■□□□□ 0.7
VCPKMT-202ENST00000395860 CFHR1Q03591 330 aa19.44■□□□□ 0.7
VCPKMT-202ENST00000395860 DEFB110Q30KQ9 67 aa19.44■□□□□ 0.7
VCPKMT-202ENST00000395860 PROX2Q3B8N5 592 aa19.44■□□□□ 0.7
VCPKMT-202ENST00000395860 INAVAQ3KP66 663 aa19.44■□□□□ 0.7
VCPKMT-202ENST00000395860 DNAL1Q4LDG9 190 aa19.44■□□□□ 0.7
VCPKMT-202ENST00000395860 SPANXN4Q5MJ08 99 aa19.44■□□□□ 0.7
VCPKMT-202ENST00000395860 ABHD17CQ6PCB6 329 aa19.44■□□□□ 0.7
VCPKMT-202ENST00000395860 WDR74Q6RFH5 385 aaPredicted RBP19.44■□□□□ 0.7
VCPKMT-202ENST00000395860 RIMKLAQ8IXN7 391 aa19.44■□□□□ 0.7
VCPKMT-202ENST00000395860 CARFQ8N187 725 aa19.44■□□□□ 0.7
VCPKMT-202ENST00000395860 TMEM132CQ8N3T6 1108 aa19.44■□□□□ 0.7
VCPKMT-202ENST00000395860 SUMF1Q8NBK3 374 aa19.44■□□□□ 0.7
VCPKMT-202ENST00000395860 PCYOX1LQ8NBM8 494 aa19.44■□□□□ 0.7
VCPKMT-202ENST00000395860 STARD8Q92502 1023 aa19.44■□□□□ 0.7
VCPKMT-202ENST00000395860 GAL3ST3Q96A11 431 aa19.44■□□□□ 0.7
VCPKMT-202ENST00000395860 TESCQ96BS2 214 aa19.44■□□□□ 0.7
VCPKMT-202ENST00000395860 PRRX2Q99811 253 aa19.44■□□□□ 0.7
VCPKMT-202ENST00000395860 LRFN3Q9BTN0 628 aa19.44■□□□□ 0.7
VCPKMT-202ENST00000395860 DNAAF2Q9NVR5 837 aaKnown RBP19.44■□□□□ 0.7
VCPKMT-202ENST00000395860 PCDHGB2Q9Y5G2 931 aa19.44■□□□□ 0.7
VCPKMT-202ENST00000395860 MN1Q10571 1320 aaPredicted RBP19.44■□□□□ 0.7
VCPKMT-202ENST00000395860 CFLARO15519 480 aa19.44■□□□□ 0.7
VCPKMT-202ENST00000395860 ZBTB11O95625 1053 aaPredicted RBP19.44■□□□□ 0.7
VCPKMT-202ENST00000395860 ZNF806P0C7X5 589 aa19.44■□□□□ 0.7
VCPKMT-202ENST00000395860 CKMT1AP12532 417 aa19.44■□□□□ 0.7
VCPKMT-202ENST00000395860 ITGAXP20702 1163 aa19.44■□□□□ 0.7
VCPKMT-202ENST00000395860 MAPK12P53778 367 aa19.44■□□□□ 0.7
VCPKMT-202ENST00000395860 VSX2P58304 361 aaPredicted RBP19.44■□□□□ 0.7
VCPKMT-202ENST00000395860 RAB8AP61006 207 aa19.44■□□□□ 0.7
VCPKMT-202ENST00000395860 COQ5Q5HYK3 327 aa19.44■□□□□ 0.7
VCPKMT-202ENST00000395860 PRR23CQ6ZRP0 262 aa19.44■□□□□ 0.7
VCPKMT-202ENST00000395860 DNAJC22Q8N4W6 341 aa19.44■□□□□ 0.7
VCPKMT-202ENST00000395860 TBCDQ9BTW9 1192 aa19.44■□□□□ 0.7
VCPKMT-202ENST00000395860 NLNQ9BYT8 704 aa19.44■□□□□ 0.7
VCPKMT-202ENST00000395860 KCNH6Q9H252 994 aa19.44■□□□□ 0.7
VCPKMT-202ENST00000395860 DDX31Q9H8H2 851 aaKnown RBP19.44■□□□□ 0.7
VCPKMT-202ENST00000395860 PDE7BQ9NP56 450 aa19.44■□□□□ 0.7
VCPKMT-202ENST00000395860 MYNNQ9NPC7 610 aa19.44■□□□□ 0.7
VCPKMT-202ENST00000395860 NDE1Q9NXR1 346 aa19.44■□□□□ 0.7
VCPKMT-202ENST00000395860 LEF1Q9UJU2 399 aaPredicted RBP19.44■□□□□ 0.7
VCPKMT-202ENST00000395860 UNC13CQ8NB66 2214 aa19.44■□□□□ 0.7
VCPKMT-202ENST00000395860 C4orf51C9J302 202 aa19.43■□□□□ 0.7
VCPKMT-202ENST00000395860 KLHL18O94889 574 aa19.43■□□□□ 0.7
VCPKMT-202ENST00000395860 PGRP06401 933 aa19.43■□□□□ 0.7
VCPKMT-202ENST00000395860 COX7A2P14406 83 aa19.43■□□□□ 0.7
VCPKMT-202ENST00000395860 S100A3P33764 101 aa19.43■□□□□ 0.7
VCPKMT-202ENST00000395860 HPCAL1P37235 193 aa19.43■□□□□ 0.7
VCPKMT-202ENST00000395860 GRK6P43250 576 aa19.43■□□□□ 0.7
VCPKMT-202ENST00000395860 TSFMP43897 325 aaKnown RBP19.43■□□□□ 0.7
VCPKMT-202ENST00000395860 C21orf58P58505 322 aa19.43■□□□□ 0.7
VCPKMT-202ENST00000395860 TAS2R50P59544 299 aa19.43■□□□□ 0.7
VCPKMT-202ENST00000395860 TCF15Q12870 199 aa19.43■□□□□ 0.7
VCPKMT-202ENST00000395860 DPY19L1Q2PZI1 675 aa19.43■□□□□ 0.7
VCPKMT-202ENST00000395860 PGS1Q32NB8 556 aa19.43■□□□□ 0.7
VCPKMT-202ENST00000395860 SNAP47Q5SQN1 464 aa19.43■□□□□ 0.7
VCPKMT-202ENST00000395860 C16orf89Q6UX73 402 aa19.43■□□□□ 0.7
VCPKMT-202ENST00000395860 RETREG3Q86VR2 466 aa19.43■□□□□ 0.7
VCPKMT-202ENST00000395860 MCATQ8IVS2 390 aaKnown RBP19.43■□□□□ 0.7
VCPKMT-202ENST00000395860 DSELQ8IZU8 1212 aa19.43■□□□□ 0.7
VCPKMT-202ENST00000395860 CSNK1A1LQ8N752 337 aa19.43■□□□□ 0.7
VCPKMT-202ENST00000395860 IFI44Q8TCB0 444 aa19.43■□□□□ 0.7
VCPKMT-202ENST00000395860 TEFMQ96QE5 360 aaKnown RBP19.43■□□□□ 0.7
VCPKMT-202ENST00000395860 PRDM7Q9NQW5 492 aa19.43■□□□□ 0.7
VCPKMT-202ENST00000395860 TMEM9Q9P0T7 183 aa19.43■□□□□ 0.7
VCPKMT-202ENST00000395860 RRP15Q9Y3B9 282 aaKnown RBP19.43■□□□□ 0.7
VCPKMT-202ENST00000395860 VPS13AQ96RL7 3174 aa19.43■□□□□ 0.7
VCPKMT-202ENST00000395860 CFAP73A6NFT4 308 aa19.42■□□□□ 0.7
VCPKMT-202ENST00000395860 SCAMP2O15127 329 aaKnown RBP19.42■□□□□ 0.7
VCPKMT-202ENST00000395860 GSC2O15499 205 aa19.42■□□□□ 0.7
VCPKMT-202ENST00000395860 ZSCAN9O15535 394 aaPredicted RBP19.42■□□□□ 0.7
VCPKMT-202ENST00000395860 HCRTR1O43613 425 aa19.42■□□□□ 0.7
VCPKMT-202ENST00000395860 ZNF888P0CJ79 500 aaPredicted RBP19.42■□□□□ 0.7
VCPKMT-202ENST00000395860 KCNJ2P63252 427 aa19.42■□□□□ 0.7
VCPKMT-202ENST00000395860 C2orf80Q0P641 193 aa19.42■□□□□ 0.7
VCPKMT-202ENST00000395860 SF3A2Q15428 464 aaKnown RBP19.42■□□□□ 0.7
VCPKMT-202ENST00000395860 MANEAQ5SRI9 462 aa19.42■□□□□ 0.7
VCPKMT-202ENST00000395860 ZNF793Q6ZN11 406 aa19.42■□□□□ 0.7
VCPKMT-202ENST00000395860 DGLUCYQ7Z3D6 616 aa19.42■□□□□ 0.7
VCPKMT-202ENST00000395860 DEFB107AQ8IZN7 70 aa19.42■□□□□ 0.7
VCPKMT-202ENST00000395860 PRSS33Q8NF86 280 aa19.42■□□□□ 0.7
VCPKMT-202ENST00000395860 OR8K5Q8NH50 307 aa19.42■□□□□ 0.7
VCPKMT-202ENST00000395860 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.42■□□□□ 0.7
VCPKMT-202ENST00000395860 ZCCHC10Q8TBK6 192 aa19.42■□□□□ 0.7
VCPKMT-202ENST00000395860 UTP15Q8TED0 518 aaKnown RBP19.42■□□□□ 0.7
VCPKMT-202ENST00000395860 MCUR1Q96AQ8 359 aa19.42■□□□□ 0.7
VCPKMT-202ENST00000395860 NUDT22Q9BRQ3 303 aa19.42■□□□□ 0.7
VCPKMT-202ENST00000395860 CADM1Q9BY67 442 aaKnown RBP19.42■□□□□ 0.7
VCPKMT-202ENST00000395860 COPS7BQ9H9Q2 264 aaPredicted RBP19.42■□□□□ 0.7
VCPKMT-202ENST00000395860 SCN3AQ9NY46 2000 aa19.42■□□□□ 0.7
VCPKMT-202ENST00000395860 ASXL3Q9C0F0 2248 aa19.42■□□□□ 0.7
VCPKMT-202ENST00000395860 A0A0A6YYD5 115 aa19.42■□□□□ 0.7
VCPKMT-202ENST00000395860 ASPDHA6ND91 283 aa19.42■□□□□ 0.7
VCPKMT-202ENST00000395860 CASC3O15234 703 aaKnown RBP19.42■□□□□ 0.7
VCPKMT-202ENST00000395860 FLRT2O43155 660 aa19.42■□□□□ 0.7
VCPKMT-202ENST00000395860 SRPX2O60687 465 aaPredicted RBP19.42■□□□□ 0.7
VCPKMT-202ENST00000395860 RPLP0P05388 317 aaKnown RBP19.42■□□□□ 0.7
VCPKMT-202ENST00000395860 HIST1H1TP22492 207 aaPredicted RBP19.42■□□□□ 0.7
VCPKMT-202ENST00000395860 GSTM5P46439 218 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms