RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 OR4D1Q15615 310 aa12.94□□□□□ -0.34
CXCL12-205ENST00000395794 TRADDQ15628 312 aa12.94□□□□□ -0.34
CXCL12-205ENST00000395794 ZKSCAN8Q15776 578 aaPredicted RBP12.94□□□□□ -0.34
CXCL12-205ENST00000395794 INAQ16352 499 aa12.94□□□□□ -0.34
CXCL12-205ENST00000395794 PDK4Q16654 411 aa12.94□□□□□ -0.34
CXCL12-205ENST00000395794 HIST2H2ACQ16777 129 aaPredicted RBP12.94□□□□□ -0.34
CXCL12-205ENST00000395794 WHAMMP3Q1A5X7 153 aa12.94□□□□□ -0.34
CXCL12-205ENST00000395794 C18orf21Q32NC0 220 aaPredicted RBP12.94□□□□□ -0.34
CXCL12-205ENST00000395794 XKR6Q5GH73 641 aa12.94□□□□□ -0.34
CXCL12-205ENST00000395794 PAGE2BQ5JRK9 111 aa12.94□□□□□ -0.34
CXCL12-205ENST00000395794 HIST2H2AA3Q6FI13 130 aa12.94□□□□□ -0.34
CXCL12-205ENST00000395794 PAPD4Q6PIY7 484 aaKnown RBP12.94□□□□□ -0.34
CXCL12-205ENST00000395794 ZDHHC24Q6UX98 284 aa12.94□□□□□ -0.34
CXCL12-205ENST00000395794 CYP4X1Q8N118 509 aa12.94□□□□□ -0.34
CXCL12-205ENST00000395794 ST6GALNAC3Q8NDV1 305 aa12.94□□□□□ -0.34
CXCL12-205ENST00000395794 M1APQ8TC57 530 aa12.94□□□□□ -0.34
CXCL12-205ENST00000395794 CREB3L4Q8TEY5 395 aa12.94□□□□□ -0.34
CXCL12-205ENST00000395794 FAR1Q8WVX9 515 aa12.94□□□□□ -0.34
CXCL12-205ENST00000395794 ZNF592Q92610 1267 aa12.94□□□□□ -0.34
CXCL12-205ENST00000395794 EXT2Q93063 718 aa12.94□□□□□ -0.34
CXCL12-205ENST00000395794 KIAA1191Q96A73 305 aa12.94□□□□□ -0.34
CXCL12-205ENST00000395794 UBXN10Q96LJ8 280 aa12.94□□□□□ -0.34
CXCL12-205ENST00000395794 PTCHD1Q96NR3 888 aa12.94□□□□□ -0.34
CXCL12-205ENST00000395794 PSMG3-AS1Q96PY0 264 aa12.94□□□□□ -0.34
CXCL12-205ENST00000395794 BARD1Q99728 777 aaKnown RBP12.94□□□□□ -0.34
CXCL12-205ENST00000395794 LRRC1Q9BTT6 524 aa12.94□□□□□ -0.34
CXCL12-205ENST00000395794 TSPYL1Q9H0U9 437 aa12.94□□□□□ -0.34
CXCL12-205ENST00000395794 RHBGQ9H310 441 aa12.94□□□□□ -0.34
CXCL12-205ENST00000395794 EHD1Q9H4M9 534 aa12.94□□□□□ -0.34
CXCL12-205ENST00000395794 NT5DC2Q9H857 520 aa12.94□□□□□ -0.34
CXCL12-205ENST00000395794 LANCL2Q9NS86 450 aa12.94□□□□□ -0.34
CXCL12-205ENST00000395794 MTRF1LQ9UGC7 380 aaKnown RBP12.94□□□□□ -0.34
CXCL12-205ENST00000395794 NTNG1Q9Y2I2 539 aa12.94□□□□□ -0.34
CXCL12-205ENST00000395794 PRRC2CQ9Y520 2896 aaKnown RBP12.93□□□□□ -0.34
CXCL12-205ENST00000395794 ESYT3A0FGR9 886 aa12.93□□□□□ -0.34
CXCL12-205ENST00000395794 OR5H15A6NDH6 313 aa12.93□□□□□ -0.34
CXCL12-205ENST00000395794 CCNT2O60583 730 aaKnown RBP12.93□□□□□ -0.34
CXCL12-205ENST00000395794 SEMA7AO75326 666 aa12.93□□□□□ -0.34
CXCL12-205ENST00000395794 FAM155BO75949 473 aa12.93□□□□□ -0.34
CXCL12-205ENST00000395794 B3GALT4O96024 378 aa12.93□□□□□ -0.34
CXCL12-205ENST00000395794 F10P00742 488 aa12.93□□□□□ -0.34
CXCL12-205ENST00000395794 EDN3P14138 238 aa12.93□□□□□ -0.34
CXCL12-205ENST00000395794 BTN3A2P78410 334 aa12.93□□□□□ -0.34
CXCL12-205ENST00000395794 GUCY2DQ02846 1103 aa12.93□□□□□ -0.34
CXCL12-205ENST00000395794 TGM3Q08188 693 aa12.93□□□□□ -0.34
CXCL12-205ENST00000395794 MEP1AQ16819 746 aa12.93□□□□□ -0.34
CXCL12-205ENST00000395794 CCDC91Q7Z6B0 441 aa12.93□□□□□ -0.34
CXCL12-205ENST00000395794 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.93□□□□□ -0.34
CXCL12-205ENST00000395794 SLC5A8Q8N695 610 aa12.93□□□□□ -0.34
CXCL12-205ENST00000395794 PDPRQ8NCN5 879 aa12.93□□□□□ -0.34
CXCL12-205ENST00000395794 MNS1Q8NEH6 495 aa12.93□□□□□ -0.34
CXCL12-205ENST00000395794 GAL3ST3Q96A11 431 aa12.93□□□□□ -0.34
CXCL12-205ENST00000395794 PTCD3Q96EY7 689 aaKnown RBP12.93□□□□□ -0.34
CXCL12-205ENST00000395794 EFCAB11Q9BUY7 163 aa12.93□□□□□ -0.34
CXCL12-205ENST00000395794 KLHL31Q9H511 634 aa12.93□□□□□ -0.34
CXCL12-205ENST00000395794 ALG9Q9H6U8 611 aa12.93□□□□□ -0.34
CXCL12-205ENST00000395794 MMP25Q9NPA2 562 aa12.93□□□□□ -0.34
CXCL12-205ENST00000395794 OLAHQ9NV23 265 aa12.93□□□□□ -0.34
CXCL12-205ENST00000395794 SLC5A6Q9Y289 635 aa12.93□□□□□ -0.34
CXCL12-205ENST00000395794 ACOT9Q9Y305 439 aa12.93□□□□□ -0.34
CXCL12-205ENST00000395794 HECTD1Q9ULT8 2610 aa12.93□□□□□ -0.34
CXCL12-205ENST00000395794 MDC1Q14676 2089 aaKnown RBP12.93□□□□□ -0.34
CXCL12-205ENST00000395794 NBASA2RRP1 2371 aa12.93□□□□□ -0.34
CXCL12-205ENST00000395794 RELNP78509 3460 aa12.93□□□□□ -0.34
CXCL12-205ENST00000395794 SYCE1LA8MT33 242 aa12.92□□□□□ -0.34
CXCL12-205ENST00000395794 SUPT3HB4E1H0 165 aa12.92□□□□□ -0.34
CXCL12-205ENST00000395794 TAPBPO15533 448 aa12.92□□□□□ -0.34
CXCL12-205ENST00000395794 ERI3O43414 337 aaKnown RBP12.92□□□□□ -0.34
CXCL12-205ENST00000395794 PRAMEF2O60811 474 aa12.92□□□□□ -0.34
CXCL12-205ENST00000395794 SUPT3HO75486 399 aa12.92□□□□□ -0.34
CXCL12-205ENST00000395794 CLEC3AO75596 197 aa12.92□□□□□ -0.34
CXCL12-205ENST00000395794 CRYABP02511 175 aaKnown RBP12.92□□□□□ -0.34
CXCL12-205ENST00000395794 LTA4HP09960 611 aaKnown RBP12.92□□□□□ -0.34
CXCL12-205ENST00000395794 SMIM10L1P0DMW3 83 aa12.92□□□□□ -0.34
CXCL12-205ENST00000395794 TFEBP19484 476 aa12.92□□□□□ -0.34
CXCL12-205ENST00000395794 IRF8Q02556 426 aa12.92□□□□□ -0.34
CXCL12-205ENST00000395794 HYAL2Q12891 473 aa12.92□□□□□ -0.34
CXCL12-205ENST00000395794 UAP1Q16222 522 aaPredicted RBP12.92□□□□□ -0.34
CXCL12-205ENST00000395794 FAM83EQ2M2I3 478 aa12.92□□□□□ -0.34
CXCL12-205ENST00000395794 ACER2Q5QJU3 275 aa12.92□□□□□ -0.34
CXCL12-205ENST00000395794 TRIM40Q6P9F5 258 aa12.92□□□□□ -0.34
CXCL12-205ENST00000395794 QSOX2Q6ZRP7 698 aa12.92□□□□□ -0.34
CXCL12-205ENST00000395794 LRRC70Q7Z2Q7 622 aa12.92□□□□□ -0.34
CXCL12-205ENST00000395794 CMC1Q7Z7K0 106 aa12.92□□□□□ -0.34
CXCL12-205ENST00000395794 SHISA5Q8N114 240 aa12.92□□□□□ -0.34
CXCL12-205ENST00000395794 TSLPQ969D9 159 aa12.92□□□□□ -0.34
CXCL12-205ENST00000395794 UBE2E3Q969T4 207 aa12.92□□□□□ -0.34
CXCL12-205ENST00000395794 MRRFQ96E11 262 aaKnown RBP12.92□□□□□ -0.34
CXCL12-205ENST00000395794 SMIM10Q96HG1 83 aa12.92□□□□□ -0.34
CXCL12-205ENST00000395794 C5orf34Q96MH7 638 aa12.92□□□□□ -0.34
CXCL12-205ENST00000395794 HS3ST6Q96QI5 342 aa12.92□□□□□ -0.34
CXCL12-205ENST00000395794 UTP23Q9BRU9 249 aaKnown RBP12.92□□□□□ -0.34
CXCL12-205ENST00000395794 TMEM79Q9BSE2 394 aa12.92□□□□□ -0.34
CXCL12-205ENST00000395794 NPLQ9BXD5 320 aaPredicted RBP12.92□□□□□ -0.34
CXCL12-205ENST00000395794 CD244Q9BZW8 370 aa12.92□□□□□ -0.34
CXCL12-205ENST00000395794 REXO4Q9GZR2 422 aaKnown RBP12.92□□□□□ -0.34
CXCL12-205ENST00000395794 COPS7BQ9H9Q2 264 aaPredicted RBP12.92□□□□□ -0.34
CXCL12-205ENST00000395794 PRDM9Q9NQV7 894 aa12.92□□□□□ -0.34
CXCL12-205ENST00000395794 NUDT4Q9NZJ9 180 aa12.92□□□□□ -0.34
CXCL12-205ENST00000395794 PTBP2Q9UKA9 531 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms