RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 OR51Q1Q8NH59 317 aa18.85■□□□□ 0.61
SNCA-203ENST00000394986 RDH11Q8TC12 318 aa18.85■□□□□ 0.61
SNCA-203ENST00000394986 TCP10LQ8TDR4 215 aa18.85■□□□□ 0.61
SNCA-203ENST00000394986 GAL3ST3Q96A11 431 aa18.85■□□□□ 0.61
SNCA-203ENST00000394986 SMIM10Q96HG1 83 aa18.85■□□□□ 0.61
SNCA-203ENST00000394986 SEC16BQ96JE7 1060 aa18.85■□□□□ 0.61
SNCA-203ENST00000394986 MTERF1Q99551 399 aaKnown RBP18.85■□□□□ 0.61
SNCA-203ENST00000394986 MS4A8Q9BY19 250 aa18.85■□□□□ 0.61
SNCA-203ENST00000394986 REXO4Q9GZR2 422 aaKnown RBP18.85■□□□□ 0.61
SNCA-203ENST00000394986 GSTO2Q9H4Y5 243 aa18.85■□□□□ 0.61
SNCA-203ENST00000394986 ZNF225Q9UK10 706 aa18.85■□□□□ 0.61
SNCA-203ENST00000394986 RALYQ9UKM9 306 aaKnown RBP18.85■□□□□ 0.61
SNCA-203ENST00000394986 NBEAQ8NFP9 2946 aa18.85■□□□□ 0.61
SNCA-203ENST00000394986 ZFYVE26Q68DK2 2539 aa18.85■□□□□ 0.61
SNCA-203ENST00000394986 URADA6NGE7 173 aa18.84■□□□□ 0.61
SNCA-203ENST00000394986 H0YIV9 168 aa18.84■□□□□ 0.61
SNCA-203ENST00000394986 OTCP00480 354 aa18.84■□□□□ 0.61
SNCA-203ENST00000394986 CCR10P46092 362 aa18.84■□□□□ 0.61
SNCA-203ENST00000394986 NEK2P51955 445 aa18.84■□□□□ 0.61
SNCA-203ENST00000394986 EFNA3P52797 238 aa18.84■□□□□ 0.61
SNCA-203ENST00000394986 PLA2G16P53816 162 aa18.84■□□□□ 0.61
SNCA-203ENST00000394986 BTN3A2P78410 334 aa18.84■□□□□ 0.61
SNCA-203ENST00000394986 ADPRMQ3LIE5 342 aa18.84■□□□□ 0.61
SNCA-203ENST00000394986 EXOC3L1Q86VI1 746 aa18.84■□□□□ 0.61
SNCA-203ENST00000394986 C10orf107Q8IVU9 208 aa18.84■□□□□ 0.61
SNCA-203ENST00000394986 OR51B5Q9H339 312 aa18.84■□□□□ 0.61
SNCA-203ENST00000394986 MKKSQ9NPJ1 570 aaPredicted RBP18.84■□□□□ 0.61
SNCA-203ENST00000394986 DMRT3Q9NQL9 472 aa18.84■□□□□ 0.61
SNCA-203ENST00000394986 NXT1Q9UKK6 140 aaKnown RBP18.84■□□□□ 0.61
SNCA-203ENST00000394986 POLHQ9Y253 713 aa18.84■□□□□ 0.61
SNCA-203ENST00000394986 PCDHGA11Q9Y5H2 935 aa18.84■□□□□ 0.61
SNCA-203ENST00000394986 MAGEB17A8MXT2 336 aa18.83■□□□□ 0.61
SNCA-203ENST00000394986 SAP18O00422 153 aaKnown RBP18.83■□□□□ 0.61
SNCA-203ENST00000394986 TYROBPO43914 113 aa18.83■□□□□ 0.61
SNCA-203ENST00000394986 OR4F21O95013 312 aa18.83■□□□□ 0.61
SNCA-203ENST00000394986 CD63P08962 238 aa18.83■□□□□ 0.61
SNCA-203ENST00000394986 XCR1P46094 333 aa18.83■□□□□ 0.61
SNCA-203ENST00000394986 NAGLUP54802 743 aa18.83■□□□□ 0.61
SNCA-203ENST00000394986 RPS13P62277 151 aaKnown RBP18.83■□□□□ 0.61
SNCA-203ENST00000394986 ATP1A4Q13733 1029 aa18.83■□□□□ 0.61
SNCA-203ENST00000394986 SSPNQ14714 243 aa18.83■□□□□ 0.61
SNCA-203ENST00000394986 CASP8Q14790 479 aa18.83■□□□□ 0.61
SNCA-203ENST00000394986 TNFAIP8L3Q5GJ75 292 aa18.83■□□□□ 0.61
SNCA-203ENST00000394986 PPP1R32Q7Z5V6 425 aa18.83■□□□□ 0.61
SNCA-203ENST00000394986 OR2L5Q8NG80 312 aa18.83■□□□□ 0.61
SNCA-203ENST00000394986 WDR20Q8TBZ3 569 aa18.83■□□□□ 0.61
SNCA-203ENST00000394986 TTC9Q92623 222 aa18.83■□□□□ 0.61
SNCA-203ENST00000394986 MTFMTQ96DP5 389 aaKnown RBP18.83■□□□□ 0.61
SNCA-203ENST00000394986 CCDC126Q96EE4 140 aa18.83■□□□□ 0.61
SNCA-203ENST00000394986 PEX11GQ96HA9 241 aa18.83■□□□□ 0.61
SNCA-203ENST00000394986 CRB3Q9BUF7 120 aa18.83■□□□□ 0.61
SNCA-203ENST00000394986 MECRQ9BV79 373 aa18.83■□□□□ 0.61
SNCA-203ENST00000394986 OXSMQ9NWU1 459 aa18.83■□□□□ 0.61
SNCA-203ENST00000394986 SENP1Q9P0U3 644 aa18.83■□□□□ 0.61
SNCA-203ENST00000394986 C3orf18Q9UK00 162 aa18.83■□□□□ 0.61
SNCA-203ENST00000394986 MAN2B2Q9Y2E5 1009 aa18.83■□□□□ 0.61
SNCA-203ENST00000394986 PCSK5Q92824 1860 aa18.83■□□□□ 0.61
SNCA-203ENST00000394986 OR2W5A6NFC9 320 aa18.83■□□□□ 0.6
SNCA-203ENST00000394986 RTCAO00442 366 aaKnown RBP18.83■□□□□ 0.6
SNCA-203ENST00000394986 CHST10O43529 356 aa18.83■□□□□ 0.6
SNCA-203ENST00000394986 RECKO95980 971 aa18.83■□□□□ 0.6
SNCA-203ENST00000394986 CHAF1BQ13112 559 aa18.83■□□□□ 0.6
SNCA-203ENST00000394986 GGTA1PQ4G0N0 100 aa18.83■□□□□ 0.6
SNCA-203ENST00000394986 CPZQ66K79 652 aa18.83■□□□□ 0.6
SNCA-203ENST00000394986 ABHD17CQ6PCB6 329 aa18.83■□□□□ 0.6
SNCA-203ENST00000394986 UBE3DQ7Z6J8 389 aa18.83■□□□□ 0.6
SNCA-203ENST00000394986 MRGPREQ86SM8 312 aa18.83■□□□□ 0.6
SNCA-203ENST00000394986 RAB43Q86YS6 212 aa18.83■□□□□ 0.6
SNCA-203ENST00000394986 REPS1Q96D71 796 aa18.83■□□□□ 0.6
SNCA-203ENST00000394986 PGM2Q96G03 612 aa18.83■□□□□ 0.6
SNCA-203ENST00000394986 CATSPER2Q96P56 530 aa18.83■□□□□ 0.6
SNCA-203ENST00000394986 TGIF2Q9GZN2 237 aa18.83■□□□□ 0.6
SNCA-203ENST00000394986 C14orf105Q9NVL8 296 aa18.83■□□□□ 0.6
SNCA-203ENST00000394986 MID2Q9UJV3 735 aa18.83■□□□□ 0.6
SNCA-203ENST00000394986 ARGFXA6NJG6 315 aa18.82■□□□□ 0.6
SNCA-203ENST00000394986 IDSB3KWA1 339 aa18.82■□□□□ 0.6
SNCA-203ENST00000394986 MASP2O00187 686 aa18.82■□□□□ 0.6
SNCA-203ENST00000394986 CDC123O75794 336 aaPredicted RBP18.82■□□□□ 0.6
SNCA-203ENST00000394986 BMP10O95393 424 aa18.82■□□□□ 0.6
SNCA-203ENST00000394986 ETHE1O95571 254 aa18.82■□□□□ 0.6
SNCA-203ENST00000394986 CERS1P27544 350 aa18.82■□□□□ 0.6
SNCA-203ENST00000394986 SERPINB1P30740 379 aa18.82■□□□□ 0.6
SNCA-203ENST00000394986 PIK3CBP42338 1070 aa18.82■□□□□ 0.6
SNCA-203ENST00000394986 DNAJB13P59910 316 aa18.82■□□□□ 0.6
SNCA-203ENST00000394986 RHDQ02161 417 aa18.82■□□□□ 0.6
SNCA-203ENST00000394986 LCP2Q13094 533 aa18.82■□□□□ 0.6
SNCA-203ENST00000394986 LINC00303Q3SY05 128 aa18.82■□□□□ 0.6
SNCA-203ENST00000394986 SGO1Q5FBB7 561 aa18.82■□□□□ 0.6
SNCA-203ENST00000394986 TCHHL1Q5QJ38 904 aaPredicted RBP18.82■□□□□ 0.6
SNCA-203ENST00000394986 KHDRBS2Q5VWX1 349 aaKnown RBP18.82■□□□□ 0.6
SNCA-203ENST00000394986 LIPMQ5VYY2 423 aa18.82■□□□□ 0.6
SNCA-203ENST00000394986 TTC19Q6DKK2 380 aaPredicted RBP18.82■□□□□ 0.6
SNCA-203ENST00000394986 FAAH2Q6GMR7 532 aa18.82■□□□□ 0.6
SNCA-203ENST00000394986 TRIM40Q6P9F5 258 aa18.82■□□□□ 0.6
SNCA-203ENST00000394986 BORAQ6PGQ7 559 aa18.82■□□□□ 0.6
SNCA-203ENST00000394986 PCSK4Q6UW60 755 aa18.82■□□□□ 0.6
SNCA-203ENST00000394986 GPRIN3Q6ZVF9 776 aa18.82■□□□□ 0.6
SNCA-203ENST00000394986 CDYL2Q8N8U2 506 aa18.82■□□□□ 0.6
SNCA-203ENST00000394986 CMTM7Q96FZ5 175 aa18.82■□□□□ 0.6
SNCA-203ENST00000394986 FAR2Q96K12 515 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms