RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 UGT8Q16880 541 aa15.52■□□□□ 0.08
PCDH1-203ENST00000394536 C5orf22Q49AR2 442 aa15.52■□□□□ 0.08
PCDH1-203ENST00000394536 ARHGAP15Q53QZ3 475 aa15.52■□□□□ 0.08
PCDH1-203ENST00000394536 STEAP3Q658P3 488 aa15.52■□□□□ 0.08
PCDH1-203ENST00000394536 GTF2IRD2BQ6EKJ0 949 aa15.52■□□□□ 0.08
PCDH1-203ENST00000394536 GTF2IRD2Q86UP8 949 aa15.52■□□□□ 0.08
PCDH1-203ENST00000394536 KLHDC8BQ8IXV7 354 aa15.52■□□□□ 0.08
PCDH1-203ENST00000394536 ARMC5Q96C12 935 aa15.52■□□□□ 0.08
PCDH1-203ENST00000394536 IL17FQ96PD4 163 aa15.52■□□□□ 0.08
PCDH1-203ENST00000394536 TMEM121BQ9BXQ6 578 aaPredicted RBP15.52■□□□□ 0.08
PCDH1-203ENST00000394536 TMEM45AQ9NWC5 275 aa15.52■□□□□ 0.08
PCDH1-203ENST00000394536 RNF186Q9NXI6 227 aa15.52■□□□□ 0.08
PCDH1-203ENST00000394536 CLEC4AQ9UMR7 237 aa15.52■□□□□ 0.08
PCDH1-203ENST00000394536 SOCS5O75159 536 aa15.52■□□□□ 0.07
PCDH1-203ENST00000394536 RPS3P23396 243 aaKnown RBP eCLIP15.52■□□□□ 0.07
PCDH1-203ENST00000394536 XKP51811 444 aa15.52■□□□□ 0.07
PCDH1-203ENST00000394536 DSTNP60981 165 aa15.52■□□□□ 0.07
PCDH1-203ENST00000394536 SCN1BQ07699 218 aa15.52■□□□□ 0.07
PCDH1-203ENST00000394536 QPRTQ15274 297 aa15.52■□□□□ 0.07
PCDH1-203ENST00000394536 SERPINA11Q86U17 422 aa15.52■□□□□ 0.07
PCDH1-203ENST00000394536 LILRA3Q8N6C8 439 aaPredicted RBP15.52■□□□□ 0.07
PCDH1-203ENST00000394536 CENPOQ9BU64 300 aa15.52■□□□□ 0.07
PCDH1-203ENST00000394536 CCDC177Q9NQR7 707 aaPredicted RBP15.52■□□□□ 0.07
PCDH1-203ENST00000394536 ZNF232Q9UNY5 417 aa15.52■□□□□ 0.07
PCDH1-203ENST00000394536 FAM240BA0A1B0GVZ2 78 aa15.51■□□□□ 0.07
PCDH1-203ENST00000394536 PLOD3O60568 738 aa15.51■□□□□ 0.07
PCDH1-203ENST00000394536 CH25HO95992 272 aa15.51■□□□□ 0.07
PCDH1-203ENST00000394536 ITGAMP11215 1152 aa15.51■□□□□ 0.07
PCDH1-203ENST00000394536 DDX5P17844 614 aaKnown RBP15.51■□□□□ 0.07
PCDH1-203ENST00000394536 MASP1P48740 699 aa15.51■□□□□ 0.07
PCDH1-203ENST00000394536 SPINT3P49223 89 aa15.51■□□□□ 0.07
PCDH1-203ENST00000394536 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.51■□□□□ 0.07
PCDH1-203ENST00000394536 ADNP2Q6IQ32 1131 aa15.51■□□□□ 0.07
PCDH1-203ENST00000394536 C17orf64Q86WR6 236 aa15.51■□□□□ 0.07
PCDH1-203ENST00000394536 TIFAQ96CG3 184 aa15.51■□□□□ 0.07
PCDH1-203ENST00000394536 ITPKCQ96DU7 683 aa15.51■□□□□ 0.07
PCDH1-203ENST00000394536 ZNF607Q96SK3 696 aa15.51■□□□□ 0.07
PCDH1-203ENST00000394536 TMEFF2Q9UIK5 374 aaPredicted RBP15.51■□□□□ 0.07
PCDH1-203ENST00000394536 CLEC4EQ9ULY5 219 aa15.51■□□□□ 0.07
PCDH1-203ENST00000394536 PCDHGB6Q9Y5F9 930 aa15.51■□□□□ 0.07
PCDH1-203ENST00000394536 CCRL2O00421 344 aa15.51■□□□□ 0.07
PCDH1-203ENST00000394536 ADAMTS4O75173 837 aa15.51■□□□□ 0.07
PCDH1-203ENST00000394536 HTR1AP08908 422 aa15.51■□□□□ 0.07
PCDH1-203ENST00000394536 RCVRNP35243 200 aa15.51■□□□□ 0.07
PCDH1-203ENST00000394536 LEXMQ3ZCV2 418 aa15.51■□□□□ 0.07
PCDH1-203ENST00000394536 FNDC3BQ53EP0 1204 aaKnown RBP15.51■□□□□ 0.07
PCDH1-203ENST00000394536 UBE2UQ5VVX9 321 aa15.51■□□□□ 0.07
PCDH1-203ENST00000394536 CBLL1Q75N03 491 aa15.51■□□□□ 0.07
PCDH1-203ENST00000394536 LAPTM4BQ86VI4 370 aa15.51■□□□□ 0.07
PCDH1-203ENST00000394536 RAB42Q8N4Z0 105 aa15.51■□□□□ 0.07
PCDH1-203ENST00000394536 PIK3R3Q92569 461 aa15.51■□□□□ 0.07
PCDH1-203ENST00000394536 GGHQ92820 318 aa15.51■□□□□ 0.07
PCDH1-203ENST00000394536 RNFT2Q96EX2 444 aa15.51■□□□□ 0.07
PCDH1-203ENST00000394536 DOK1Q99704 481 aa15.51■□□□□ 0.07
PCDH1-203ENST00000394536 A0A1W2PQ45 241 aaPredicted RBP15.51■□□□□ 0.07
PCDH1-203ENST00000394536 A0A1W2PQY0 241 aa15.51■□□□□ 0.07
PCDH1-203ENST00000394536 AGAP5A6NIR3 686 aa15.51■□□□□ 0.07
PCDH1-203ENST00000394536 A6NL46 340 aa15.51■□□□□ 0.07
PCDH1-203ENST00000394536 GFRA2O00451 464 aa15.51■□□□□ 0.07
PCDH1-203ENST00000394536 PCDH17O14917 1159 aa15.51■□□□□ 0.07
PCDH1-203ENST00000394536 ANKRD28O15084 1053 aa15.51■□□□□ 0.07
PCDH1-203ENST00000394536 JRKO75564 520 aa15.51■□□□□ 0.07
PCDH1-203ENST00000394536 CXCL14O95715 111 aa15.51■□□□□ 0.07
PCDH1-203ENST00000394536 BMP1P13497 986 aa15.51■□□□□ 0.07
PCDH1-203ENST00000394536 RPL3P39023 403 aaKnown RBP15.51■□□□□ 0.07
PCDH1-203ENST00000394536 SSR2P43308 183 aa15.51■□□□□ 0.07
PCDH1-203ENST00000394536 ZNF763Q0D2J5 394 aa15.51■□□□□ 0.07
PCDH1-203ENST00000394536 EIF4EBP2Q13542 120 aaPredicted RBP15.51■□□□□ 0.07
PCDH1-203ENST00000394536 CBX2Q14781 532 aaPredicted RBP15.51■□□□□ 0.07
PCDH1-203ENST00000394536 FBXO43Q4G163 708 aa15.51■□□□□ 0.07
PCDH1-203ENST00000394536 ZNF544Q6NX49 715 aa15.51■□□□□ 0.07
PCDH1-203ENST00000394536 ZNF517Q6ZMY9 492 aaPredicted RBP15.51■□□□□ 0.07
PCDH1-203ENST00000394536 ENTHD1Q8IYW4 607 aa15.51■□□□□ 0.07
PCDH1-203ENST00000394536 IGSF21Q96ID5 467 aa15.51■□□□□ 0.07
PCDH1-203ENST00000394536 REEP4Q9H6H4 257 aa15.51■□□□□ 0.07
PCDH1-203ENST00000394536 MARCH5Q9NX47 278 aa15.51■□□□□ 0.07
PCDH1-203ENST00000394536 INSL5Q9Y5Q6 135 aa15.51■□□□□ 0.07
PCDH1-203ENST00000394536 HSPE1-MOB4S4R3N1 261 aa15.51■□□□□ 0.07
PCDH1-203ENST00000394536 GLOD5A6NK44 160 aa15.5■□□□□ 0.07
PCDH1-203ENST00000394536 FAM227AF5H4B4 570 aa15.5■□□□□ 0.07
PCDH1-203ENST00000394536 H7C0S8 307 aa15.5■□□□□ 0.07
PCDH1-203ENST00000394536 TMEM189-UBE2V1I3L0A0 370 aa15.5■□□□□ 0.07
PCDH1-203ENST00000394536 LEFTY1O75610 366 aa15.5■□□□□ 0.07
PCDH1-203ENST00000394536 PRSS23O95084 383 aa15.5■□□□□ 0.07
PCDH1-203ENST00000394536 WISP3O95389 354 aaPredicted RBP15.5■□□□□ 0.07
PCDH1-203ENST00000394536 PTHP01270 115 aa15.5■□□□□ 0.07
PCDH1-203ENST00000394536 C8AP07357 584 aa15.5■□□□□ 0.07
PCDH1-203ENST00000394536 SOX3P41225 446 aa15.5■□□□□ 0.07
PCDH1-203ENST00000394536 TMEM115Q12893 351 aaPredicted RBP15.5■□□□□ 0.07
PCDH1-203ENST00000394536 SPIN4Q56A73 249 aa15.5■□□□□ 0.07
PCDH1-203ENST00000394536 LIPJQ5W064 366 aa15.5■□□□□ 0.07
PCDH1-203ENST00000394536 B3GNT7Q8NFL0 401 aa15.5■□□□□ 0.07
PCDH1-203ENST00000394536 ING5Q8WYH8 240 aa15.5■□□□□ 0.07
PCDH1-203ENST00000394536 KLHL6Q8WZ60 621 aa15.5■□□□□ 0.07
PCDH1-203ENST00000394536 TP53INP1Q96A56 240 aa15.5■□□□□ 0.07
PCDH1-203ENST00000394536 TEFMQ96QE5 360 aaKnown RBP15.5■□□□□ 0.07
PCDH1-203ENST00000394536 SIAEQ9HAT2 523 aa15.5■□□□□ 0.07
PCDH1-203ENST00000394536 RLIMQ9NVW2 624 aa15.5■□□□□ 0.07
PCDH1-203ENST00000394536 SLC9A8Q9Y2E8 581 aa15.5■□□□□ 0.07
PCDH1-203ENST00000394536 TMEM88BA6NKF7 163 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms