RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 RHBGQ9H310 441 aa28.98■■■□□ 2.23
CMTM4-202ENST00000394106 EPS8L2Q9H6S3 715 aa28.98■■■□□ 2.23
CMTM4-202ENST00000394106 PRM3Q9NNZ6 103 aa28.98■■■□□ 2.23
CMTM4-202ENST00000394106 PTGFRNQ9P2B2 879 aa28.98■■■□□ 2.23
CMTM4-202ENST00000394106 COPG2Q9UBF2 871 aa28.98■■■□□ 2.23
CMTM4-202ENST00000394106 CSAG2Q9Y5P2 127 aa28.98■■■□□ 2.23
CMTM4-202ENST00000394106 SCN2AQ99250 2005 aa28.98■■■□□ 2.23
CMTM4-202ENST00000394106 SMIM10L1P0DMW3 83 aa28.97■■■□□ 2.23
CMTM4-202ENST00000394106 MTHFD2P13995 350 aa28.97■■■□□ 2.23
CMTM4-202ENST00000394106 GFAPP14136 432 aa28.97■■■□□ 2.23
CMTM4-202ENST00000394106 CD22P20273 847 aa28.97■■■□□ 2.23
CMTM4-202ENST00000394106 GSTM2P28161 218 aa28.97■■■□□ 2.23
CMTM4-202ENST00000394106 HNRNPH1P31943 449 aaKnown RBP28.97■■■□□ 2.23
CMTM4-202ENST00000394106 BTN3A2P78410 334 aa28.97■■■□□ 2.23
CMTM4-202ENST00000394106 RHAGQ02094 409 aa28.97■■■□□ 2.23
CMTM4-202ENST00000394106 ABRAXAS2Q15018 415 aa28.97■■■□□ 2.23
CMTM4-202ENST00000394106 INPP5JQ15735 1006 aaPredicted RBP28.97■■■□□ 2.23
CMTM4-202ENST00000394106 NSDHLQ15738 373 aa28.97■■■□□ 2.23
CMTM4-202ENST00000394106 PAGE2BQ5JRK9 111 aa28.97■■■□□ 2.23
CMTM4-202ENST00000394106 ADNP2Q6IQ32 1131 aa28.97■■■□□ 2.23
CMTM4-202ENST00000394106 ATCAYQ86WG3 371 aa28.97■■■□□ 2.23
CMTM4-202ENST00000394106 SIRT6Q8N6T7 355 aa28.97■■■□□ 2.23
CMTM4-202ENST00000394106 GAL3ST3Q96A11 431 aa28.97■■■□□ 2.23
CMTM4-202ENST00000394106 WDR34Q96EX3 536 aa28.97■■■□□ 2.23
CMTM4-202ENST00000394106 SMIM10Q96HG1 83 aa28.97■■■□□ 2.23
CMTM4-202ENST00000394106 FAR2Q96K12 515 aa28.97■■■□□ 2.23
CMTM4-202ENST00000394106 WDR77Q9BQA1 342 aaPredicted RBP28.97■■■□□ 2.23
CMTM4-202ENST00000394106 ZNF490Q9ULM2 529 aaPredicted RBP28.97■■■□□ 2.23
CMTM4-202ENST00000394106 A0A0G2JN53 185 aa28.96■■■□□ 2.23
CMTM4-202ENST00000394106 K7EPI3 171 aa28.96■■■□□ 2.23
CMTM4-202ENST00000394106 B4GALT2O60909 372 aa28.96■■■□□ 2.23
CMTM4-202ENST00000394106 CLEC3AO75596 197 aa28.96■■■□□ 2.23
CMTM4-202ENST00000394106 WFS1O76024 890 aa28.96■■■□□ 2.23
CMTM4-202ENST00000394106 JAK1P23458 1154 aa28.96■■■□□ 2.23
CMTM4-202ENST00000394106 LAPTM5Q13571 262 aa28.96■■■□□ 2.23
CMTM4-202ENST00000394106 HIST2H2ACQ16777 129 aaPredicted RBP28.96■■■□□ 2.23
CMTM4-202ENST00000394106 CRB2Q5IJ48 1285 aa28.96■■■□□ 2.23
CMTM4-202ENST00000394106 HIST2H2AA3Q6FI13 130 aa28.96■■■□□ 2.23
CMTM4-202ENST00000394106 VN1R5Q7Z5H4 357 aa28.96■■■□□ 2.23
CMTM4-202ENST00000394106 LRRN4CLQ8ND94 238 aa28.96■■■□□ 2.23
CMTM4-202ENST00000394106 TSLPQ969D9 159 aa28.96■■■□□ 2.23
CMTM4-202ENST00000394106 MS4A6EQ96DS6 147 aa28.96■■■□□ 2.23
CMTM4-202ENST00000394106 SEC16BQ96JE7 1060 aa28.96■■■□□ 2.23
CMTM4-202ENST00000394106 IMMP1LQ96LU5 166 aa28.96■■■□□ 2.23
CMTM4-202ENST00000394106 LRIT2A6NDA9 550 aa28.95■■■□□ 2.22
CMTM4-202ENST00000394106 ERI3O43414 337 aaKnown RBP28.95■■■□□ 2.22
CMTM4-202ENST00000394106 KRT38O76015 456 aa28.95■■■□□ 2.22
CMTM4-202ENST00000394106 ITGAMP11215 1152 aa28.95■■■□□ 2.22
CMTM4-202ENST00000394106 ICAM2P13598 275 aa28.95■■■□□ 2.22
CMTM4-202ENST00000394106 MFAP5Q13361 173 aa28.95■■■□□ 2.22
CMTM4-202ENST00000394106 PFKFB4Q16877 469 aa28.95■■■□□ 2.22
CMTM4-202ENST00000394106 IGFL2Q6UWQ7 119 aa28.95■■■□□ 2.22
CMTM4-202ENST00000394106 RIPOR1Q6ZS17 1223 aa28.95■■■□□ 2.22
CMTM4-202ENST00000394106 Q6ZS92 163 aa28.95■■■□□ 2.22
CMTM4-202ENST00000394106 IQCKQ8N0W5 287 aa28.95■■■□□ 2.22
CMTM4-202ENST00000394106 PLD6Q8N2A8 252 aaKnown RBP28.95■■■□□ 2.22
CMTM4-202ENST00000394106 DNAJB14Q8TBM8 379 aa28.95■■■□□ 2.22
CMTM4-202ENST00000394106 PPP4R1Q8TF05 950 aa28.95■■■□□ 2.22
CMTM4-202ENST00000394106 DCAKDQ8WVC6 231 aa28.95■■■□□ 2.22
CMTM4-202ENST00000394106 PSMF1Q92530 271 aa28.95■■■□□ 2.22
CMTM4-202ENST00000394106 CNDP1Q96KN2 507 aa28.95■■■□□ 2.22
CMTM4-202ENST00000394106 GPR78Q96P69 363 aa28.95■■■□□ 2.22
CMTM4-202ENST00000394106 CLK4Q9HAZ1 481 aaKnown RBP28.95■■■□□ 2.22
CMTM4-202ENST00000394106 CPSF2Q9P2I0 782 aaKnown RBP28.95■■■□□ 2.22
CMTM4-202ENST00000394106 ANGPTL3Q9Y5C1 460 aa28.95■■■□□ 2.22
CMTM4-202ENST00000394106 EXOC1LA0A1B0GW35 172 aa28.94■■■□□ 2.22
CMTM4-202ENST00000394106 CCDC189A1A4V9 331 aa28.94■■■□□ 2.22
CMTM4-202ENST00000394106 MAGEB17A8MXT2 336 aa28.94■■■□□ 2.22
CMTM4-202ENST00000394106 PSMD12O00232 456 aaPredicted RBP28.94■■■□□ 2.22
CMTM4-202ENST00000394106 RNH1P13489 461 aaKnown RBP28.94■■■□□ 2.22
CMTM4-202ENST00000394106 SETDB1Q15047 1291 aa28.94■■■□□ 2.22
CMTM4-202ENST00000394106 TBCCQ15814 346 aa28.94■■■□□ 2.22
CMTM4-202ENST00000394106 SFT2D3Q587I9 215 aa28.94■■■□□ 2.22
CMTM4-202ENST00000394106 TEX9Q8N6V9 391 aa28.94■■■□□ 2.22
CMTM4-202ENST00000394106 PLPP5Q8NEB5 264 aa28.94■■■□□ 2.22
CMTM4-202ENST00000394106 ZNF358Q9NW07 568 aa28.94■■■□□ 2.22
CMTM4-202ENST00000394106 TRIM49D1C9J1S8 452 aa28.93■■■□□ 2.22
CMTM4-202ENST00000394106 VPS4BO75351 444 aa28.93■■■□□ 2.22
CMTM4-202ENST00000394106 EPB42P16452 691 aa28.93■■■□□ 2.22
CMTM4-202ENST00000394106 MAGEA12P43365 314 aa28.93■■■□□ 2.22
CMTM4-202ENST00000394106 PLA2G16P53816 162 aa28.93■■■□□ 2.22
CMTM4-202ENST00000394106 AP2B1P63010 937 aa28.93■■■□□ 2.22
CMTM4-202ENST00000394106 ACTN3Q08043 901 aaPredicted RBP28.93■■■□□ 2.22
CMTM4-202ENST00000394106 BTBD16Q32M84 506 aa28.93■■■□□ 2.22
CMTM4-202ENST00000394106 TRMT10CQ7L0Y3 403 aaKnown RBP28.93■■■□□ 2.22
CMTM4-202ENST00000394106 CUZD1Q86UP6 607 aa28.93■■■□□ 2.22
CMTM4-202ENST00000394106 CA13Q8N1Q1 262 aa28.93■■■□□ 2.22
CMTM4-202ENST00000394106 ISL2Q96A47 359 aa28.93■■■□□ 2.22
CMTM4-202ENST00000394106 MAGEB10Q96LZ2 347 aaPredicted RBP28.93■■■□□ 2.22
CMTM4-202ENST00000394106 LMF1Q96S06 567 aa28.93■■■□□ 2.22
CMTM4-202ENST00000394106 REXO4Q9GZR2 422 aaKnown RBP28.93■■■□□ 2.22
CMTM4-202ENST00000394106 ZNF180Q9UJW8 692 aa28.93■■■□□ 2.22
CMTM4-202ENST00000394106 VPS4AQ9UN37 437 aa28.93■■■□□ 2.22
CMTM4-202ENST00000394106 SETXQ7Z333 2677 aaKnown RBP28.92■■■□□ 2.22
CMTM4-202ENST00000394106 FAM227AF5H4B4 570 aa28.92■■■□□ 2.22
CMTM4-202ENST00000394106 FAM153BP0C7A2 387 aa28.92■■■□□ 2.22
CMTM4-202ENST00000394106 CNTFP26441 200 aa28.92■■■□□ 2.22
CMTM4-202ENST00000394106 HPDP32754 393 aaPredicted RBP28.92■■■□□ 2.22
CMTM4-202ENST00000394106 SOX11P35716 441 aa28.92■■■□□ 2.22
CMTM4-202ENST00000394106 CASP2P42575 452 aa28.92■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms