RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 NETO1Q8TDF5 533 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 CEP19Q96LK0 163 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 TBATAQ96M53 351 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 TRNT1Q96Q11 434 aaKnown RBP10.73□□□□□ -0.69
CUX1-204ENST00000393824 ZNF382Q96SR6 550 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 FAM83CQ9BQN1 747 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 SP110Q9HB58 689 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 PRDM8Q9NQV8 689 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 CATSPERZQ9NTU4 200 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 SLC25A37Q9NYZ2 338 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 GDE1Q9NZC3 331 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 NUFIP1Q9UHK0 495 aaKnown RBP10.73□□□□□ -0.69
CUX1-204ENST00000393824 NUP50Q9UKX7 468 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 LINC00854A0A1B0GVQ3 168 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 FAM220BPB1ANY3 271 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 CPNE3O75131 537 aaKnown RBP10.72□□□□□ -0.69
CUX1-204ENST00000393824 CDK1P06493 297 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 FPR1P21462 350 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 CD72P21854 359 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 DNAJA1P31689 397 aaKnown RBP10.72□□□□□ -0.69
CUX1-204ENST00000393824 IL12RB1P42701 662 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 GZMKP49863 264 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 DSTNP60981 165 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 RPP38P78345 283 aaKnown RBP10.72□□□□□ -0.69
CUX1-204ENST00000393824 OLR1P78380 273 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 IL1RL1Q01638 556 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 DSC2Q02487 901 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 STK11Q15831 433 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 MPPE1Q53F39 396 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 ARMCX4Q5H9R4 360 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 HABP4Q5JVS0 413 aaKnown RBP10.72□□□□□ -0.69
CUX1-204ENST00000393824 NDUFAF5Q5TEU4 345 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 FAM122CQ6P4D5 195 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 C19orf48Q6RUI8 117 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 GPRIN3Q6ZVF9 776 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 P3H2Q8IVL5 708 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 RDH10Q8IZV5 341 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 DEPDC4Q8N2C3 294 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 CDYL2Q8N8U2 506 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 OR4L1Q8NH43 312 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 SUSD6Q92537 303 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 HRASLS5Q96KN8 279 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 MCCC1Q96RQ3 725 aaPredicted RBP10.72□□□□□ -0.69
CUX1-204ENST00000393824 TBCDQ9BTW9 1192 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 MAGEH1Q9H213 219 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 NARFLQ9H6Q4 476 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 ZNF556Q9HAH1 456 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 DYRK4Q9NR20 520 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 GALPQ9UBC7 116 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.72□□□□□ -0.69
CUX1-204ENST00000393824 MUTYHQ9UIF7 546 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 KLHL21Q9UJP4 597 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 VPS13AQ96RL7 3174 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 TMEM265A0A087WTH1 108 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 ARHGEF9O43307 516 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 NOS1APO75052 506 aaPredicted RBP10.72□□□□□ -0.69
CUX1-204ENST00000393824 RHOBTB1O94844 696 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 HLA-DMAP28067 261 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 AKT1P31749 480 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 SLC6A11P48066 632 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 GZMMP51124 257 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 YBEYP58557 167 aaPredicted RBP10.72□□□□□ -0.69
CUX1-204ENST00000393824 PLIN5Q00G26 463 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 ITKQ08881 620 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 NPRL3Q12980 569 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 EFR3AQ14156 821 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 MAPKAPK3Q16644 382 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 PRPF38BQ5VTL8 546 aaKnown RBP10.72□□□□□ -0.69
CUX1-204ENST00000393824 CREB3L2Q70SY1 520 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 LURAP1LQ8IV03 231 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 FBXL6Q8N531 539 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 DNAJB8Q8NHS0 232 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 ARRDC2Q8TBH0 407 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 NCLNQ969V3 563 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 FUBP1Q96AE4 644 aaKnown RBP10.72□□□□□ -0.69
CUX1-204ENST00000393824 VOPP1Q96AW1 172 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 SMIM14Q96QK8 99 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 NIPAL2Q9H841 368 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 ZDHHC4Q9NPG8 344 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 IL1RAPQ9NPH3 570 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 VPS9D1Q9Y2B5 631 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 FCF1Q9Y324 198 aaKnown RBP10.72□□□□□ -0.69
CUX1-204ENST00000393824 COL4A3Q01955 1670 aa10.72□□□□□ -0.69
CUX1-204ENST00000393824 NUP210Q8TEM1 1887 aaPredicted RBP10.71□□□□□ -0.69
CUX1-204ENST00000393824 TRBV5-3A0A0A0MS03 114 aa10.71□□□□□ -0.69
CUX1-204ENST00000393824 SLC35F4A4IF30 521 aa10.71□□□□□ -0.69
CUX1-204ENST00000393824 OR51F1A6NGY5 319 aa10.71□□□□□ -0.69
CUX1-204ENST00000393824 CLCA1A8K7I4 914 aa10.71□□□□□ -0.69
CUX1-204ENST00000393824 LEUTXA8MZ59 168 aa10.71□□□□□ -0.69
CUX1-204ENST00000393824 PLK4O00444 970 aa10.71□□□□□ -0.69
CUX1-204ENST00000393824 KDELR3O43731 214 aa10.71□□□□□ -0.69
CUX1-204ENST00000393824 CAPN1P07384 714 aa10.71□□□□□ -0.69
CUX1-204ENST00000393824 GSTM1P09488 218 aa10.71□□□□□ -0.69
CUX1-204ENST00000393824 PSMA3P25788 255 aa10.71□□□□□ -0.69
CUX1-204ENST00000393824 SLC19A1P41440 591 aa10.71□□□□□ -0.69
CUX1-204ENST00000393824 LAPTM4AQ15012 233 aa10.71□□□□□ -0.69
CUX1-204ENST00000393824 IER5LQ5T953 404 aa10.71□□□□□ -0.69
CUX1-204ENST00000393824 DPY19L3Q6ZPD9 716 aa10.71□□□□□ -0.69
CUX1-204ENST00000393824 ADIPOR2Q86V24 386 aa10.71□□□□□ -0.69
CUX1-204ENST00000393824 OR6K2Q8NGY2 324 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms