RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 AHRP35869 848 aa15.55■□□□□ 0.08
PTPRK-208ENST00000392449 GMPRP36959 345 aa15.55■□□□□ 0.08
PTPRK-208ENST00000392449 OC90Q02509 493 aaPredicted RBP15.55■□□□□ 0.08
PTPRK-208ENST00000392449 NKAPQ8N5F7 415 aaKnown RBP15.55■□□□□ 0.08
PTPRK-208ENST00000392449 TBC1D19Q8N5T2 526 aa15.55■□□□□ 0.08
PTPRK-208ENST00000392449 DNAJB8Q8NHS0 232 aa15.55■□□□□ 0.08
PTPRK-208ENST00000392449 ITLN2Q8WWU7 325 aaPredicted RBP15.55■□□□□ 0.08
PTPRK-208ENST00000392449 CCDC120Q96HB5 630 aa15.55■□□□□ 0.08
PTPRK-208ENST00000392449 MS4A3Q96HJ5 214 aa15.55■□□□□ 0.08
PTPRK-208ENST00000392449 VPS39Q96JC1 886 aa15.55■□□□□ 0.08
PTPRK-208ENST00000392449 AIF1LQ9BQI0 150 aa15.55■□□□□ 0.08
PTPRK-208ENST00000392449 MCMBPQ9BTE3 642 aa15.55■□□□□ 0.08
PTPRK-208ENST00000392449 DPH5Q9H2P9 285 aa15.55■□□□□ 0.08
PTPRK-208ENST00000392449 COPG2Q9UBF2 871 aa15.55■□□□□ 0.08
PTPRK-208ENST00000392449 MTO1Q9Y2Z2 717 aaKnown RBP15.55■□□□□ 0.08
PTPRK-208ENST00000392449 OARD1Q9Y530 152 aa15.55■□□□□ 0.08
PTPRK-208ENST00000392449 CCL21O00585 134 aa15.54■□□□□ 0.08
PTPRK-208ENST00000392449 NDC80O14777 642 aa15.54■□□□□ 0.08
PTPRK-208ENST00000392449 PRMT3O60678 531 aa15.54■□□□□ 0.08
PTPRK-208ENST00000392449 NEURL1O76050 574 aa15.54■□□□□ 0.08
PTPRK-208ENST00000392449 SMIM10L1P0DMW3 83 aa15.54■□□□□ 0.08
PTPRK-208ENST00000392449 JAK1P23458 1154 aa15.54■□□□□ 0.08
PTPRK-208ENST00000392449 SSTR1P30872 391 aa15.54■□□□□ 0.08
PTPRK-208ENST00000392449 ADNP2Q6IQ32 1131 aa15.54■□□□□ 0.08
PTPRK-208ENST00000392449 FRA10AC1Q70Z53 315 aa15.54■□□□□ 0.08
PTPRK-208ENST00000392449 GALNTL5Q7Z4T8 443 aa15.54■□□□□ 0.08
PTPRK-208ENST00000392449 CA13Q8N1Q1 262 aa15.54■□□□□ 0.08
PTPRK-208ENST00000392449 SLC5A8Q8N695 610 aa15.54■□□□□ 0.08
PTPRK-208ENST00000392449 ELP5Q8TE02 316 aa15.54■□□□□ 0.08
PTPRK-208ENST00000392449 SCMH1Q96GD3 660 aa15.54■□□□□ 0.08
PTPRK-208ENST00000392449 SMIM10Q96HG1 83 aa15.54■□□□□ 0.08
PTPRK-208ENST00000392449 RUNDC3BQ96NL0 473 aa15.54■□□□□ 0.08
PTPRK-208ENST00000392449 RHOJQ9H4E5 214 aa15.54■□□□□ 0.08
PTPRK-208ENST00000392449 GPAMQ9HCL2 828 aa15.54■□□□□ 0.08
PTPRK-208ENST00000392449 CTNNAL1Q9UBT7 734 aa15.54■□□□□ 0.08
PTPRK-208ENST00000392449 TINAGQ9UJW2 476 aa15.54■□□□□ 0.08
PTPRK-208ENST00000392449 KCNE2Q9Y6J6 123 aa15.54■□□□□ 0.08
PTPRK-208ENST00000392449 CREBBPQ92793 2442 aa15.54■□□□□ 0.08
PTPRK-208ENST00000392449 IGKV3D-11A0A0A0MRZ8 115 aa15.53■□□□□ 0.08
PTPRK-208ENST00000392449 PHGDHO43175 533 aaKnown RBP15.53■□□□□ 0.08
PTPRK-208ENST00000392449 TPP2P29144 1249 aaPredicted RBP15.53■□□□□ 0.08
PTPRK-208ENST00000392449 HNRNPH1P31943 449 aaKnown RBP15.53■□□□□ 0.08
PTPRK-208ENST00000392449 CA7P43166 264 aa15.53■□□□□ 0.08
PTPRK-208ENST00000392449 SLC6A12P48065 614 aa15.53■□□□□ 0.08
PTPRK-208ENST00000392449 BTN3A2P78410 334 aa15.53■□□□□ 0.08
PTPRK-208ENST00000392449 SLBPQ14493 270 aaKnown RBP eCLIP15.53■□□□□ 0.08
PTPRK-208ENST00000392449 SLCO4C1Q6ZQN7 724 aa15.53■□□□□ 0.08
PTPRK-208ENST00000392449 QSOX2Q6ZRP7 698 aa15.53■□□□□ 0.08
PTPRK-208ENST00000392449 TRPV3Q8NET8 790 aa15.53■□□□□ 0.08
PTPRK-208ENST00000392449 CCT6BQ92526 530 aa15.53■□□□□ 0.08
PTPRK-208ENST00000392449 MARVELD3Q96A59 401 aa15.53■□□□□ 0.08
PTPRK-208ENST00000392449 ESAMQ96AP7 390 aa15.53■□□□□ 0.08
PTPRK-208ENST00000392449 RHBDF1Q96CC6 855 aa15.53■□□□□ 0.08
PTPRK-208ENST00000392449 FRMD6Q96NE9 622 aa15.53■□□□□ 0.08
PTPRK-208ENST00000392449 TMEM79Q9BSE2 394 aa15.53■□□□□ 0.08
PTPRK-208ENST00000392449 TCRBV16S1A1N1A0A5B0 115 aa15.52■□□□□ 0.08
PTPRK-208ENST00000392449 SAGE2PA6NJ88 616 aa15.52■□□□□ 0.08
PTPRK-208ENST00000392449 NPIPA5E9PKD4 350 aa15.52■□□□□ 0.08
PTPRK-208ENST00000392449 TGFBR3LH3BV60 316 aa15.52■□□□□ 0.08
PTPRK-208ENST00000392449 CCDC188H7C350 402 aa15.52■□□□□ 0.08
PTPRK-208ENST00000392449 SLC19A2O60779 497 aa15.52■□□□□ 0.08
PTPRK-208ENST00000392449 PRAMEF4O60810 478 aa15.52■□□□□ 0.08
PTPRK-208ENST00000392449 WISP3O95389 354 aaPredicted RBP15.52■□□□□ 0.08
PTPRK-208ENST00000392449 MYBL2P10244 700 aa15.52■□□□□ 0.08
PTPRK-208ENST00000392449 RNH1P13489 461 aaKnown RBP15.52■□□□□ 0.08
PTPRK-208ENST00000392449 EEF1DP29692 281 aaKnown RBP15.52■□□□□ 0.08
PTPRK-208ENST00000392449 PPP2R1BP30154 601 aa15.52■□□□□ 0.08
PTPRK-208ENST00000392449 PAFAH1B1P43034 410 aa15.52■□□□□ 0.08
PTPRK-208ENST00000392449 HNRNPFP52597 415 aaKnown RBP15.52■□□□□ 0.08
PTPRK-208ENST00000392449 TAS2R50P59544 299 aa15.52■□□□□ 0.08
PTPRK-208ENST00000392449 SKP1P63208 163 aa15.52■□□□□ 0.08
PTPRK-208ENST00000392449 CDKL1Q00532 357 aa15.52■□□□□ 0.08
PTPRK-208ENST00000392449 HSF1Q00613 529 aa15.52■□□□□ 0.08
PTPRK-208ENST00000392449 RUNX2Q13950 521 aa15.52■□□□□ 0.08
PTPRK-208ENST00000392449 C3AR1Q16581 482 aa15.52■□□□□ 0.08
PTPRK-208ENST00000392449 PRAMEF9Q5VWM5 478 aa15.52■□□□□ 0.08
PTPRK-208ENST00000392449 SP5Q6BEB4 398 aaPredicted RBP15.52■□□□□ 0.08
PTPRK-208ENST00000392449 NCCRP1Q6ZVX7 275 aaPredicted RBP15.52■□□□□ 0.08
PTPRK-208ENST00000392449 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.52■□□□□ 0.08
PTPRK-208ENST00000392449 ADAMTSL2Q86TH1 951 aa15.52■□□□□ 0.08
PTPRK-208ENST00000392449 RPS19BP1Q86WX3 136 aaKnown RBP15.52■□□□□ 0.08
PTPRK-208ENST00000392449 ZNF227Q86WZ6 799 aa15.52■□□□□ 0.08
PTPRK-208ENST00000392449 SRRM1Q8IYB3 904 aaKnown RBP15.52■□□□□ 0.08
PTPRK-208ENST00000392449 TMEM52Q8NDY8 209 aa15.52■□□□□ 0.08
PTPRK-208ENST00000392449 NFAM1Q8NET5 270 aaPredicted RBP15.52■□□□□ 0.08
PTPRK-208ENST00000392449 THAP3Q8WTV1 239 aaPredicted RBP15.52■□□□□ 0.08
PTPRK-208ENST00000392449 SAYSD1Q9NPB0 183 aa15.52■□□□□ 0.08
PTPRK-208ENST00000392449 LRFN1Q9P244 771 aa15.52■□□□□ 0.08
PTPRK-208ENST00000392449 NPIPA1Q9UND3 350 aa15.52■□□□□ 0.08
PTPRK-208ENST00000392449 PCNX1Q96RV3 2341 aa15.52■□□□□ 0.08
PTPRK-208ENST00000392449 FBN2P35556 2912 aa15.52■□□□□ 0.08
PTPRK-208ENST00000392449 PSMD12O00232 456 aaPredicted RBP15.52■□□□□ 0.07
PTPRK-208ENST00000392449 TAPBPO15533 448 aa15.52■□□□□ 0.07
PTPRK-208ENST00000392449 TBX6O95947 436 aaPredicted RBP15.52■□□□□ 0.07
PTPRK-208ENST00000392449 SP1P08047 785 aa15.52■□□□□ 0.07
PTPRK-208ENST00000392449 SERPINA6P08185 405 aa15.52■□□□□ 0.07
PTPRK-208ENST00000392449 C1GALT1C1LP0DN25 315 aa15.52■□□□□ 0.07
PTPRK-208ENST00000392449 CD46P15529 392 aa15.52■□□□□ 0.07
PTPRK-208ENST00000392449 HNMTP50135 292 aa15.52■□□□□ 0.07
PTPRK-208ENST00000392449 TGFBIQ15582 683 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms