RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 GCKRQ14397 625 aa2.39□□□□□ -2.03
TRAV40-201ENST00000390467 TAZQ16635 292 aa2.39□□□□□ -2.03
TRAV40-201ENST00000390467 POM121L1PQ3SYA9 428 aa2.39□□□□□ -2.03
TRAV40-201ENST00000390467 UTF1Q5T230 341 aa2.39□□□□□ -2.03
TRAV40-201ENST00000390467 DMKNQ6E0U4 476 aaPredicted RBP2.39□□□□□ -2.03
TRAV40-201ENST00000390467 MOXD1Q6UVY6 613 aa2.39□□□□□ -2.03
TRAV40-201ENST00000390467 ENPP7Q6UWV6 458 aa2.39□□□□□ -2.03
TRAV40-201ENST00000390467 PRUNE1Q86TP1 453 aa2.39□□□□□ -2.03
TRAV40-201ENST00000390467 FAM219AQ8IW50 185 aa2.39□□□□□ -2.03
TRAV40-201ENST00000390467 KIAA1524Q8TCG1 905 aa2.39□□□□□ -2.03
TRAV40-201ENST00000390467 BADQ92934 168 aa2.39□□□□□ -2.03
TRAV40-201ENST00000390467 EXT2Q93063 718 aa2.39□□□□□ -2.03
TRAV40-201ENST00000390467 MARCH7Q9H992 704 aa2.39□□□□□ -2.03
TRAV40-201ENST00000390467 WDR41Q9HAD4 459 aa2.39□□□□□ -2.03
TRAV40-201ENST00000390467 C3orf14Q9HBI5 128 aa2.39□□□□□ -2.03
TRAV40-201ENST00000390467 DEPPQ9NTK1 212 aa2.39□□□□□ -2.03
TRAV40-201ENST00000390467 EXOC1Q9NV70 894 aa2.39□□□□□ -2.03
TRAV40-201ENST00000390467 POGZQ7Z3K3 1410 aa2.39□□□□□ -2.03
TRAV40-201ENST00000390467 TRBV5-4A0A0C4DH59 114 aa2.38□□□□□ -2.03
TRAV40-201ENST00000390467 URADA6NGE7 173 aa2.38□□□□□ -2.03
TRAV40-201ENST00000390467 HAT1O14929 419 aa2.38□□□□□ -2.03
TRAV40-201ENST00000390467 INPP4BO15327 924 aa2.38□□□□□ -2.03
TRAV40-201ENST00000390467 ZNF253O75346 499 aa2.38□□□□□ -2.03
TRAV40-201ENST00000390467 IGHG1P01857 330 aa2.38□□□□□ -2.03
TRAV40-201ENST00000390467 QDPRP09417 244 aa2.38□□□□□ -2.03
TRAV40-201ENST00000390467 IL11P20809 199 aa2.38□□□□□ -2.03
TRAV40-201ENST00000390467 FEN1P39748 380 aaKnown RBP2.38□□□□□ -2.03
TRAV40-201ENST00000390467 SLC1A4P43007 532 aa2.38□□□□□ -2.03
TRAV40-201ENST00000390467 CRYBA2P53672 197 aa2.38□□□□□ -2.03
TRAV40-201ENST00000390467 EVCP57679 992 aa2.38□□□□□ -2.03
TRAV40-201ENST00000390467 KRTAP10-1P60331 282 aa2.38□□□□□ -2.03
TRAV40-201ENST00000390467 CAPRIN1Q14444 709 aaKnown RBP2.38□□□□□ -2.03
TRAV40-201ENST00000390467 GRB14Q14449 540 aa2.38□□□□□ -2.03
TRAV40-201ENST00000390467 CCL14Q16627 93 aa2.38□□□□□ -2.03
TRAV40-201ENST00000390467 LRRC37A5PQ49AS3 106 aa2.38□□□□□ -2.03
TRAV40-201ENST00000390467 LINC00242Q5T6M2 205 aa2.38□□□□□ -2.03
TRAV40-201ENST00000390467 GPR139Q6DWJ6 353 aa2.38□□□□□ -2.03
TRAV40-201ENST00000390467 FUT10Q6P4F1 479 aa2.38□□□□□ -2.03
TRAV40-201ENST00000390467 TRMT11Q7Z4G4 463 aaKnown RBP2.38□□□□□ -2.03
TRAV40-201ENST00000390467 COX8CQ7Z4L0 72 aa2.38□□□□□ -2.03
TRAV40-201ENST00000390467 PRPF39Q86UA1 669 aaKnown RBP2.38□□□□□ -2.03
TRAV40-201ENST00000390467 AMIGO1Q86WK6 493 aa2.38□□□□□ -2.03
TRAV40-201ENST00000390467 PARP8Q8N3A8 854 aa2.38□□□□□ -2.03
TRAV40-201ENST00000390467 CCDC185Q8N715 623 aa2.38□□□□□ -2.03
TRAV40-201ENST00000390467 OR6T1Q8NGN1 323 aa2.38□□□□□ -2.03
TRAV40-201ENST00000390467 FLVCR1-AS1Q8TAF5 88 aa2.38□□□□□ -2.03
TRAV40-201ENST00000390467 PGAP3Q96FM1 320 aaPredicted RBP2.38□□□□□ -2.03
TRAV40-201ENST00000390467 RADILQ96JH8 1075 aa2.38□□□□□ -2.03
TRAV40-201ENST00000390467 POLR3GLQ9BT43 218 aa2.38□□□□□ -2.03
TRAV40-201ENST00000390467 GTPBP2Q9BX10 602 aaKnown RBP2.38□□□□□ -2.03
TRAV40-201ENST00000390467 TEX13BQ9BXU2 312 aa2.38□□□□□ -2.03
TRAV40-201ENST00000390467 SNX25Q9H3E2 840 aa2.38□□□□□ -2.03
TRAV40-201ENST00000390467 SPATA2Q9UM82 520 aa2.38□□□□□ -2.03
TRAV40-201ENST00000390467 AGTPBP1Q9UPW5 1226 aa2.38□□□□□ -2.03
TRAV40-201ENST00000390467 PRSS46E5RG02 174 aa2.37□□□□□ -2.03
TRAV40-201ENST00000390467 ANHXE9PGG2 379 aa2.37□□□□□ -2.03
TRAV40-201ENST00000390467 SH3BP5O60239 455 aa2.37□□□□□ -2.03
TRAV40-201ENST00000390467 C9P02748 559 aa2.37□□□□□ -2.03
TRAV40-201ENST00000390467 PRB2P02812 416 aaPredicted RBP2.37□□□□□ -2.03
TRAV40-201ENST00000390467 MYBL1P10243 752 aa2.37□□□□□ -2.03
TRAV40-201ENST00000390467 ANPEPP15144 967 aa2.37□□□□□ -2.03
TRAV40-201ENST00000390467 PPP5CP53041 499 aa2.37□□□□□ -2.03
TRAV40-201ENST00000390467 PPIAP62937 165 aaKnown RBP2.37□□□□□ -2.03
TRAV40-201ENST00000390467 SULT2A1Q06520 285 aa2.37□□□□□ -2.03
TRAV40-201ENST00000390467 IL10RBQ08334 325 aa2.37□□□□□ -2.03
TRAV40-201ENST00000390467 RFTN1Q14699 578 aaPredicted RBP2.37□□□□□ -2.03
TRAV40-201ENST00000390467 MAPRE1Q15691 268 aaKnown RBP2.37□□□□□ -2.03
TRAV40-201ENST00000390467 ZNF79Q15937 498 aa2.37□□□□□ -2.03
TRAV40-201ENST00000390467 ZNF542PQ5EBM4 170 aa2.37□□□□□ -2.03
TRAV40-201ENST00000390467 MUC21Q5SSG8 566 aa2.37□□□□□ -2.03
TRAV40-201ENST00000390467 BTNL8Q6UX41 500 aa2.37□□□□□ -2.03
TRAV40-201ENST00000390467 Q71RC1 249 aaPredicted RBP2.37□□□□□ -2.03
TRAV40-201ENST00000390467 NRARPQ7Z6K4 114 aa2.37□□□□□ -2.03
TRAV40-201ENST00000390467 MFN1Q8IWA4 741 aa2.37□□□□□ -2.03
TRAV40-201ENST00000390467 PRSS35Q8N3Z0 413 aa2.37□□□□□ -2.03
TRAV40-201ENST00000390467 B3GALT6Q96L58 329 aa2.37□□□□□ -2.03
TRAV40-201ENST00000390467 CFAP57Q96MR6 1250 aa2.37□□□□□ -2.03
TRAV40-201ENST00000390467 RUNDC3BQ96NL0 473 aa2.37□□□□□ -2.03
TRAV40-201ENST00000390467 TNFRSF13CQ96RJ3 184 aa2.37□□□□□ -2.03
TRAV40-201ENST00000390467 PCDHB18PQ96TA0 734 aa2.37□□□□□ -2.03
TRAV40-201ENST00000390467 ALKBH7Q9BT30 221 aaPredicted RBP2.37□□□□□ -2.03
TRAV40-201ENST00000390467 KATNB1Q9BVA0 655 aa2.37□□□□□ -2.03
TRAV40-201ENST00000390467 ANKRD2Q9GZV1 360 aa2.37□□□□□ -2.03
TRAV40-201ENST00000390467 C5orf66Q9H5L9 145 aa2.37□□□□□ -2.03
TRAV40-201ENST00000390467 KCNK13Q9HB14 408 aa2.37□□□□□ -2.03
TRAV40-201ENST00000390467 RAB9BQ9NP90 201 aa2.37□□□□□ -2.03
TRAV40-201ENST00000390467 DHRS4-AS1Q9P1J3 65 aa2.37□□□□□ -2.03
TRAV40-201ENST00000390467 BCCIPQ9P287 314 aaKnown RBP eCLIP2.37□□□□□ -2.03
TRAV40-201ENST00000390467 SLC12A6Q9UHW9 1150 aa2.37□□□□□ -2.03
TRAV40-201ENST00000390467 IKZF3Q9UKT9 509 aa2.37□□□□□ -2.03
TRAV40-201ENST00000390467 SATB2Q9UPW6 733 aa2.37□□□□□ -2.03
TRAV40-201ENST00000390467 A0A1W2PPW3 197 aa2.36□□□□□ -2.03
TRAV40-201ENST00000390467 LOC390937A0A1W2PQ73 354 aa2.36□□□□□ -2.03
TRAV40-201ENST00000390467 ANGPTL1O95841 491 aa2.36□□□□□ -2.03
TRAV40-201ENST00000390467 IGHG3P01860 377 aa2.36□□□□□ -2.03
TRAV40-201ENST00000390467 EEF2P13639 858 aaKnown RBP2.36□□□□□ -2.03
TRAV40-201ENST00000390467 AKR1B1P15121 316 aa2.36□□□□□ -2.03
TRAV40-201ENST00000390467 GOT1P17174 413 aa2.36□□□□□ -2.03
TRAV40-201ENST00000390467 SSTR1P30872 391 aa2.36□□□□□ -2.03
TRAV40-201ENST00000390467 HSPA4P34932 840 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms