RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 RUNDC3AQ59EK9 446 aa13.75□□□□□ -0.21
RTF1-201ENST00000389629 ZNF467Q7Z7K2 595 aaPredicted RBP13.75□□□□□ -0.21
RTF1-201ENST00000389629 CACUL1Q86Y37 369 aa13.75□□□□□ -0.21
RTF1-201ENST00000389629 OR51V1Q9H2C8 321 aa13.75□□□□□ -0.21
RTF1-201ENST00000389629 KCNN2Q9H2S1 579 aa13.75□□□□□ -0.21
RTF1-201ENST00000389629 EXTL2Q9UBQ6 330 aa13.75□□□□□ -0.21
RTF1-201ENST00000389629 A0A1W2PRB8 838 aa13.75□□□□□ -0.21
RTF1-201ENST00000389629 CPNE6O95741 557 aa13.75□□□□□ -0.21
RTF1-201ENST00000389629 RETP07949 1114 aa13.75□□□□□ -0.21
RTF1-201ENST00000389629 CSKP41240 450 aa13.75□□□□□ -0.21
RTF1-201ENST00000389629 RGS6P49758 472 aa13.75□□□□□ -0.21
RTF1-201ENST00000389629 MLLT10P55197 1068 aa13.75□□□□□ -0.21
RTF1-201ENST00000389629 BTG3Q14201 252 aaPredicted RBP13.75□□□□□ -0.21
RTF1-201ENST00000389629 SOWAHCQ53LP3 525 aaPredicted RBP13.75□□□□□ -0.21
RTF1-201ENST00000389629 CCSAPQ6IQ19 270 aaPredicted RBP13.75□□□□□ -0.21
RTF1-201ENST00000389629 GDF6Q6KF10 455 aaPredicted RBP13.75□□□□□ -0.21
RTF1-201ENST00000389629 CAPN13Q6MZZ7 669 aaPredicted RBP13.75□□□□□ -0.21
RTF1-201ENST00000389629 MED27Q6P2C8 311 aa13.75□□□□□ -0.21
RTF1-201ENST00000389629 CMTM7Q96FZ5 175 aa13.75□□□□□ -0.21
RTF1-201ENST00000389629 ZNF385DQ9H6B1 395 aa13.75□□□□□ -0.21
RTF1-201ENST00000389629 PHF11Q9UIL8 331 aa13.75□□□□□ -0.21
RTF1-201ENST00000389629 A0A0U1RQF3 1178 aa13.75□□□□□ -0.21
RTF1-201ENST00000389629 IQCMA0A1B0GVH7 501 aa13.75□□□□□ -0.21
RTF1-201ENST00000389629 M0R233 179 aa13.75□□□□□ -0.21
RTF1-201ENST00000389629 KDELR3O43731 214 aa13.75□□□□□ -0.21
RTF1-201ENST00000389629 PSMD4P55036 377 aaKnown RBP13.75□□□□□ -0.21
RTF1-201ENST00000389629 ANKRD54Q6NXT1 300 aa13.75□□□□□ -0.21
RTF1-201ENST00000389629 ARL9Q6T311 187 aa13.75□□□□□ -0.21
RTF1-201ENST00000389629 SLC22A15Q8IZD6 547 aa13.75□□□□□ -0.21
RTF1-201ENST00000389629 ZNF583Q96ND8 569 aa13.75□□□□□ -0.21
RTF1-201ENST00000389629 AMBRA1Q9C0C7 1298 aa13.75□□□□□ -0.21
RTF1-201ENST00000389629 DPAGT1Q9H3H5 408 aa13.75□□□□□ -0.21
RTF1-201ENST00000389629 GORASP2Q9H8Y8 452 aa13.75□□□□□ -0.21
RTF1-201ENST00000389629 GPRC5BQ9NZH0 403 aa13.75□□□□□ -0.21
RTF1-201ENST00000389629 BCHEP06276 602 aa13.75□□□□□ -0.21
RTF1-201ENST00000389629 LINGO2Q7L985 606 aa13.75□□□□□ -0.21
RTF1-201ENST00000389629 OR9Q2Q8NGE9 314 aa13.75□□□□□ -0.21
RTF1-201ENST00000389629 UPF1Q92900 1129 aaKnown RBP eCLIP13.75□□□□□ -0.211e-7■■□□□ 13.6
RTF1-201ENST00000389629 CENPOQ9BU64 300 aa13.75□□□□□ -0.21
RTF1-201ENST00000389629 DOHHQ9BU89 302 aa13.75□□□□□ -0.21
RTF1-201ENST00000389629 HMX3A6NHT5 357 aa13.74□□□□□ -0.21
RTF1-201ENST00000389629 ARNTLO00327 626 aa13.74□□□□□ -0.21
RTF1-201ENST00000389629 H1F0P07305 194 aaKnown RBP13.74□□□□□ -0.21
RTF1-201ENST00000389629 PIM1P11309 404 aaPredicted RBP13.74□□□□□ -0.21
RTF1-201ENST00000389629 CKBP12277 381 aa13.74□□□□□ -0.21
RTF1-201ENST00000389629 EIF2DP41214 584 aaKnown RBP13.74□□□□□ -0.21
RTF1-201ENST00000389629 KEAP1Q14145 624 aa13.74□□□□□ -0.21
RTF1-201ENST00000389629 ZMYND11Q15326 602 aa13.74□□□□□ -0.21
RTF1-201ENST00000389629 RAB41Q5JT25 222 aa13.74□□□□□ -0.21
RTF1-201ENST00000389629 LIN54Q6MZP7 749 aa13.74□□□□□ -0.21
RTF1-201ENST00000389629 PAMR1Q6UXH9 720 aa13.74□□□□□ -0.21
RTF1-201ENST00000389629 MTSS1LQ765P7 747 aa13.74□□□□□ -0.21
RTF1-201ENST00000389629 PTRH1Q86Y79 214 aaKnown RBP13.74□□□□□ -0.21
RTF1-201ENST00000389629 UBE2E3Q969T4 207 aa13.74□□□□□ -0.21
RTF1-201ENST00000389629 ZCCHC2Q9C0B9 1178 aaKnown RBP13.74□□□□□ -0.21
RTF1-201ENST00000389629 ABCG5Q9H222 651 aa13.74□□□□□ -0.21
RTF1-201ENST00000389629 TRPS1Q9UHF7 1281 aa13.74□□□□□ -0.21
RTF1-201ENST00000389629 EVPLQ92817 2033 aa13.74□□□□□ -0.21
RTF1-201ENST00000389629 ASGR1P07306 291 aa13.74□□□□□ -0.21
RTF1-201ENST00000389629 PRKACAP17612 351 aa13.74□□□□□ -0.21
RTF1-201ENST00000389629 PSMD8P48556 350 aa13.74□□□□□ -0.21
RTF1-201ENST00000389629 MCCD1P59942 119 aaPredicted RBP13.74□□□□□ -0.21
RTF1-201ENST00000389629 TSPAN5P62079 268 aa13.74□□□□□ -0.21
RTF1-201ENST00000389629 FUT10Q6P4F1 479 aa13.74□□□□□ -0.21
RTF1-201ENST00000389629 LRRC70Q7Z2Q7 622 aa13.74□□□□□ -0.21
RTF1-201ENST00000389629 NPAS3Q8IXF0 933 aa13.74□□□□□ -0.21
RTF1-201ENST00000389629 FAM20CQ8IXL6 584 aa13.74□□□□□ -0.21
RTF1-201ENST00000389629 GPR150Q8NGU9 434 aa13.74□□□□□ -0.21
RTF1-201ENST00000389629 DUS3LQ96G46 650 aaKnown RBP13.74□□□□□ -0.21
RTF1-201ENST00000389629 FAM120CQ9NX05 1096 aaKnown RBP13.74□□□□□ -0.21
RTF1-201ENST00000389629 RPS6KB2Q9UBS0 482 aa13.74□□□□□ -0.21
RTF1-201ENST00000389629 SYN3O14994 580 aa13.74□□□□□ -0.21
RTF1-201ENST00000389629 CNR2P34972 360 aa13.74□□□□□ -0.21
RTF1-201ENST00000389629 PGBD2Q6P3X8 592 aa13.74□□□□□ -0.21
RTF1-201ENST00000389629 BOCQ9BWV1 1114 aa13.74□□□□□ -0.21
RTF1-201ENST00000389629 GPN1Q9HCN4 374 aaPredicted RBP13.74□□□□□ -0.21
RTF1-201ENST00000389629 HOXD11P31277 338 aaPredicted RBP13.74□□□□□ -0.21
RTF1-201ENST00000389629 LIPAP38571 399 aa13.74□□□□□ -0.21
RTF1-201ENST00000389629 CLDN8P56748 225 aa13.74□□□□□ -0.21
RTF1-201ENST00000389629 GPR33Q49SQ1 333 aa13.74□□□□□ -0.21
RTF1-201ENST00000389629 ADGRF1Q5T601 910 aa13.74□□□□□ -0.21
RTF1-201ENST00000389629 ZNF767PQ75MW2 155 aa13.74□□□□□ -0.21
RTF1-201ENST00000389629 LHFPL3Q86UP9 236 aa13.74□□□□□ -0.21
RTF1-201ENST00000389629 FAM109AQ8N4B1 249 aa13.74□□□□□ -0.21
RTF1-201ENST00000389629 YIPF7Q8N8F6 280 aa13.74□□□□□ -0.21
RTF1-201ENST00000389629 RFKQ969G6 155 aa13.74□□□□□ -0.21
RTF1-201ENST00000389629 MRPL48Q96GC5 212 aaKnown RBP13.74□□□□□ -0.21
RTF1-201ENST00000389629 RNF167Q9H6Y7 350 aa13.74□□□□□ -0.21
RTF1-201ENST00000389629 TAS2R16Q9NYV7 291 aa13.74□□□□□ -0.21
RTF1-201ENST00000389629 MGAT4AQ9UM21 535 aa13.74□□□□□ -0.21
RTF1-201ENST00000389629 OARD1Q9Y530 152 aa13.74□□□□□ -0.21
RTF1-201ENST00000389629 MAB21L2Q9Y586 359 aa13.74□□□□□ -0.21
RTF1-201ENST00000389629 AHDC1Q5TGY3 1603 aaPredicted RBP13.73□□□□□ -0.21
RTF1-201ENST00000389629 FXYD1O00168 92 aa13.73□□□□□ -0.21
RTF1-201ENST00000389629 C6orf47O95873 294 aa13.73□□□□□ -0.21
RTF1-201ENST00000389629 PTNP21246 168 aa13.73□□□□□ -0.21
RTF1-201ENST00000389629 LRIT3Q3SXY7 679 aa13.73□□□□□ -0.21
RTF1-201ENST00000389629 CATSPEREQ5SY80 951 aa13.73□□□□□ -0.21
RTF1-201ENST00000389629 RNF130Q86XS8 419 aa13.73□□□□□ -0.21
RTF1-201ENST00000389629 COQ8AQ8NI60 647 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms