RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 CASQ1P31415 396 aa24.76■■□□□ 1.55
NPHP3-202ENST00000383282 HNF4AP41235 474 aa24.76■■□□□ 1.55
NPHP3-202ENST00000383282 ELK3P41970 407 aa24.76■■□□□ 1.55
NPHP3-202ENST00000383282 CYB561P49447 251 aa24.76■■□□□ 1.55
NPHP3-202ENST00000383282 ADORA2A-AS1P86434 159 aa24.76■■□□□ 1.55
NPHP3-202ENST00000383282 RBBP5Q15291 538 aaKnown RBP24.76■■□□□ 1.55
NPHP3-202ENST00000383282 TMPRSS11BQ86T26 416 aa24.76■■□□□ 1.55
NPHP3-202ENST00000383282 KIF2BQ8N4N8 673 aa24.76■■□□□ 1.55
NPHP3-202ENST00000383282 OLFM1Q99784 485 aa24.76■■□□□ 1.55
NPHP3-202ENST00000383282 KCNE2Q9Y6J6 123 aa24.76■■□□□ 1.55
NPHP3-202ENST00000383282 ASNA1O43681 348 aa24.75■■□□□ 1.55
NPHP3-202ENST00000383282 TPP2P29144 1249 aaPredicted RBP24.75■■□□□ 1.55
NPHP3-202ENST00000383282 PGGT1BP53609 377 aa24.75■■□□□ 1.55
NPHP3-202ENST00000383282 RAB8AP61006 207 aa24.75■■□□□ 1.55
NPHP3-202ENST00000383282 ETF1P62495 437 aaKnown RBP24.75■■□□□ 1.55
NPHP3-202ENST00000383282 MORF4L2Q15014 288 aa24.75■■□□□ 1.55
NPHP3-202ENST00000383282 HP1BP3Q5SSJ5 553 aaPredicted RBP24.75■■□□□ 1.55
NPHP3-202ENST00000383282 SBSNQ6UWP8 590 aa24.75■■□□□ 1.55
NPHP3-202ENST00000383282 THOC6Q86W42 341 aaKnown RBP24.75■■□□□ 1.55
NPHP3-202ENST00000383282 TMEM125Q96AQ2 219 aa24.75■■□□□ 1.55
NPHP3-202ENST00000383282 LRRC39Q96DD0 335 aa24.75■■□□□ 1.55
NPHP3-202ENST00000383282 SLC6A16Q9GZN6 736 aa24.75■■□□□ 1.55
NPHP3-202ENST00000383282 GPAMQ9HCL2 828 aa24.75■■□□□ 1.55
NPHP3-202ENST00000383282 PRDM9Q9NQV7 894 aa24.75■■□□□ 1.55
NPHP3-202ENST00000383282 SAR1BQ9Y6B6 198 aa24.75■■□□□ 1.55
NPHP3-202ENST00000383282 FCHO1O14526 889 aa24.74■■□□□ 1.55
NPHP3-202ENST00000383282 SNRPB2P08579 225 aaKnown RBP24.74■■□□□ 1.55
NPHP3-202ENST00000383282 ZNF24P17028 368 aa24.74■■□□□ 1.55
NPHP3-202ENST00000383282 BTG2P78543 158 aa24.74■■□□□ 1.55
NPHP3-202ENST00000383282 NXPE4Q6UWF7 544 aa24.74■■□□□ 1.55
NPHP3-202ENST00000383282 SYT10Q6XYQ8 523 aa24.74■■□□□ 1.55
NPHP3-202ENST00000383282 EID3Q8N140 333 aa24.74■■□□□ 1.55
NPHP3-202ENST00000383282 NKAPQ8N5F7 415 aaKnown RBP24.74■■□□□ 1.55
NPHP3-202ENST00000383282 ANKRD53Q8N9V6 530 aa24.74■■□□□ 1.55
NPHP3-202ENST00000383282 C16orf45Q96MC5 204 aaPredicted RBP24.74■■□□□ 1.55
NPHP3-202ENST00000383282 PHF12Q96QT6 1004 aa24.74■■□□□ 1.55
NPHP3-202ENST00000383282 EGFL8Q99944 293 aa24.74■■□□□ 1.55
NPHP3-202ENST00000383282 RHBGQ9H310 441 aa24.74■■□□□ 1.55
NPHP3-202ENST00000383282 ZFATQ9P243 1243 aa24.74■■□□□ 1.55
NPHP3-202ENST00000383282 SLC22A14Q9Y267 594 aa24.74■■□□□ 1.55
NPHP3-202ENST00000383282 MEMO1Q9Y316 297 aa24.74■■□□□ 1.55
NPHP3-202ENST00000383282 CSMD1Q96PZ7 3565 aa24.74■■□□□ 1.55
NPHP3-202ENST00000383282 NME2P1O60361 137 aa24.73■■□□□ 1.55
NPHP3-202ENST00000383282 SERPINA6P08185 405 aa24.73■■□□□ 1.55
NPHP3-202ENST00000383282 ZNF37AP17032 561 aaPredicted RBP24.73■■□□□ 1.55
NPHP3-202ENST00000383282 MAOAP21397 527 aa24.73■■□□□ 1.55
NPHP3-202ENST00000383282 SAT1P21673 171 aa24.73■■□□□ 1.55
NPHP3-202ENST00000383282 NME2P22392 152 aa24.73■■□□□ 1.55
NPHP3-202ENST00000383282 MLF1P58340 268 aa24.73■■□□□ 1.55
NPHP3-202ENST00000383282 PPP1R3AQ16821 1122 aa24.73■■□□□ 1.55
NPHP3-202ENST00000383282 ZNF468Q5VIY5 522 aaPredicted RBP24.73■■□□□ 1.55
NPHP3-202ENST00000383282 TRMT10BQ6PF06 316 aaKnown RBP24.73■■□□□ 1.55
NPHP3-202ENST00000383282 SIAH3Q8IW03 269 aa24.73■■□□□ 1.55
NPHP3-202ENST00000383282 ANKRD7Q92527 254 aa24.73■■□□□ 1.55
NPHP3-202ENST00000383282 DEFB126Q9BYW3 111 aa24.73■■□□□ 1.55
NPHP3-202ENST00000383282 PLAC1Q9HBJ0 212 aa24.73■■□□□ 1.55
NPHP3-202ENST00000383282 TCRBV16S1A1N1A0A5B0 115 aa24.72■■□□□ 1.55
NPHP3-202ENST00000383282 CDKL1Q00532 357 aa24.72■■□□□ 1.55
NPHP3-202ENST00000383282 TOR1AIP1Q5JTV8 583 aa24.72■■□□□ 1.55
NPHP3-202ENST00000383282 STEAP4Q687X5 459 aa24.72■■□□□ 1.55
NPHP3-202ENST00000383282 SYDE1Q6ZW31 735 aaPredicted RBP24.72■■□□□ 1.55
NPHP3-202ENST00000383282 ADAMTS18Q8TE60 1221 aa24.72■■□□□ 1.55
NPHP3-202ENST00000383282 TRIM51Q9BSJ1 452 aa24.72■■□□□ 1.55
NPHP3-202ENST00000383282 TRIM45Q9H8W5 580 aaPredicted RBP24.72■■□□□ 1.55
NPHP3-202ENST00000383282 IKZF3Q9UKT9 509 aa24.72■■□□□ 1.55
NPHP3-202ENST00000383282 IGKV3D-11A0A0A0MRZ8 115 aa24.71■■□□□ 1.55
NPHP3-202ENST00000383282 A8MUA0 341 aa24.71■■□□□ 1.55
NPHP3-202ENST00000383282 PRRG2O14669 202 aa24.71■■□□□ 1.55
NPHP3-202ENST00000383282 CLDN14O95500 239 aa24.71■■□□□ 1.55
NPHP3-202ENST00000383282 SMIM10L1P0DMW3 83 aa24.71■■□□□ 1.55
NPHP3-202ENST00000383282 IVDP26440 423 aa24.71■■□□□ 1.55
NPHP3-202ENST00000383282 TRHRP34981 398 aaPredicted RBP24.71■■□□□ 1.55
NPHP3-202ENST00000383282 HNMTP50135 292 aa24.71■■□□□ 1.55
NPHP3-202ENST00000383282 HLCSP50747 726 aa24.71■■□□□ 1.55
NPHP3-202ENST00000383282 ITGA8P53708 1063 aa24.71■■□□□ 1.55
NPHP3-202ENST00000383282 ARL4CP56559 192 aa24.71■■□□□ 1.55
NPHP3-202ENST00000383282 STXBP1P61764 594 aaKnown RBP24.71■■□□□ 1.55
NPHP3-202ENST00000383282 FRG1Q14331 258 aaKnown RBP24.71■■□□□ 1.55
NPHP3-202ENST00000383282 FRA10AC1Q70Z53 315 aa24.71■■□□□ 1.55
NPHP3-202ENST00000383282 POGLUT1Q8NBL1 392 aa24.71■■□□□ 1.55
NPHP3-202ENST00000383282 MTFMTQ96DP5 389 aaKnown RBP24.71■■□□□ 1.55
NPHP3-202ENST00000383282 SMIM10Q96HG1 83 aa24.71■■□□□ 1.55
NPHP3-202ENST00000383282 FAR2Q96K12 515 aa24.71■■□□□ 1.55
NPHP3-202ENST00000383282 CAPZA3Q96KX2 299 aa24.71■■□□□ 1.55
NPHP3-202ENST00000383282 PWWP2AQ96N64 755 aa24.71■■□□□ 1.55
NPHP3-202ENST00000383282 RUNDC3BQ96NL0 473 aa24.71■■□□□ 1.55
NPHP3-202ENST00000383282 NECTIN3Q9NQS3 549 aa24.71■■□□□ 1.55
NPHP3-202ENST00000383282 KLF13Q9Y2Y9 288 aaPredicted RBP24.71■■□□□ 1.55
NPHP3-202ENST00000383282 MMACHCQ9Y4U1 282 aa24.71■■□□□ 1.55
NPHP3-202ENST00000383282 TEX264Q9Y6I9 313 aa24.71■■□□□ 1.55
NPHP3-202ENST00000383282 NPEPPSL1A6NEC2 478 aa24.7■■□□□ 1.54
NPHP3-202ENST00000383282 CDC7O00311 574 aa24.7■■□□□ 1.54
NPHP3-202ENST00000383282 H2AFYO75367 372 aaKnown RBP24.7■■□□□ 1.54
NPHP3-202ENST00000383282 CLCN2P51788 898 aa24.7■■□□□ 1.54
NPHP3-202ENST00000383282 HYAL2Q12891 473 aa24.7■■□□□ 1.54
NPHP3-202ENST00000383282 CA13Q8N1Q1 262 aa24.7■■□□□ 1.54
NPHP3-202ENST00000383282 CPSF7Q8N684 471 aaKnown RBP24.7■■□□□ 1.54
NPHP3-202ENST00000383282 NFAM1Q8NET5 270 aaPredicted RBP24.7■■□□□ 1.54
NPHP3-202ENST00000383282 TTLQ8NG68 377 aa24.7■■□□□ 1.54
NPHP3-202ENST00000383282 AGAP11Q8TF27 550 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms