RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 FAM76AQ8TAV0 307 aa12.02□□□□□ -0.48
SMN1-202ENST00000380707 LRRC8CQ8TDW0 803 aa12.02□□□□□ -0.48
SMN1-202ENST00000380707 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.02□□□□□ -0.48
SMN1-202ENST00000380707 MAGEB18Q96M61 343 aa12.02□□□□□ -0.48
SMN1-202ENST00000380707 LRFN5Q96NI6 719 aa12.02□□□□□ -0.48
SMN1-202ENST00000380707 C17orf62Q9BQA9 187 aa12.02□□□□□ -0.48
SMN1-202ENST00000380707 TMEM121BQ9BXQ6 578 aaPredicted RBP12.02□□□□□ -0.48
SMN1-202ENST00000380707 ACPTQ9BZG2 426 aa12.02□□□□□ -0.48
SMN1-202ENST00000380707 TUBB1Q9H4B7 451 aa12.02□□□□□ -0.48
SMN1-202ENST00000380707 BRF2Q9HAW0 419 aa12.02□□□□□ -0.48
SMN1-202ENST00000380707 PNPOQ9NVS9 261 aa12.02□□□□□ -0.48
SMN1-202ENST00000380707 HAO1Q9UJM8 370 aa12.02□□□□□ -0.48
SMN1-202ENST00000380707 PPT2Q9UMR5 302 aa12.02□□□□□ -0.48
SMN1-202ENST00000380707 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.02□□□□□ -0.48
SMN1-202ENST00000380707 NAALAD2Q9Y3Q0 740 aa12.02□□□□□ -0.48
SMN1-202ENST00000380707 PTGDR2Q9Y5Y4 395 aa12.02□□□□□ -0.48
SMN1-202ENST00000380707 MAU2Q9Y6X3 613 aa12.02□□□□□ -0.48
SMN1-202ENST00000380707 DSPP15924 2871 aaKnown RBP12.02□□□□□ -0.49
SMN1-202ENST00000380707 A0A0G2JN53 185 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 URADA6NGE7 173 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.01□□□□□ -0.49
SMN1-202ENST00000380707 SGK494L7N484 410 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 RTCAO00442 366 aaKnown RBP12.01□□□□□ -0.49
SMN1-202ENST00000380707 GALR3O60755 368 aaPredicted RBP12.01□□□□□ -0.49
SMN1-202ENST00000380707 DNAJB6O75190 326 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 CD82P27701 267 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 RPL14P50914 215 aaKnown RBP12.01□□□□□ -0.49
SMN1-202ENST00000380707 DCDP81605 110 aaKnown RBP12.01□□□□□ -0.49
SMN1-202ENST00000380707 HMGCS1Q01581 520 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 GUCY1A3Q02108 690 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 CUL3Q13618 768 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 TMEM35AQ53FP2 167 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 ABHD17CQ6PCB6 329 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 ZNF517Q6ZMY9 492 aaPredicted RBP12.01□□□□□ -0.49
SMN1-202ENST00000380707 TRIM46Q7Z4K8 759 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 DTX1Q86Y01 620 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 SHISA5Q8N114 240 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 PROKR1Q8TCW9 393 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 GAL3ST3Q96A11 431 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 MVB12AQ96EY5 273 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 MMABQ96EY8 250 aaPredicted RBP12.01□□□□□ -0.49
SMN1-202ENST00000380707 SORBS1Q9BX66 1292 aaKnown RBP12.01□□□□□ -0.49
SMN1-202ENST00000380707 ANKHQ9HCJ1 492 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 SLCO1B3Q9NPD5 702 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 LHX9Q9NQ69 397 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 PRDM7Q9NQW5 492 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 SLC22A11Q9NSA0 550 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 PADI1Q9ULC6 663 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 SLC12A4Q9UP95 1085 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 FER1L5A0AVI2 2057 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 ANKRD11Q6UB99 2663 aaPredicted RBP12.01□□□□□ -0.49
SMN1-202ENST00000380707 SCN3AQ9NY46 2000 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 SERTM1A2A2V5 107 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 ZNF860A6NHJ4 632 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 PLPP1O14494 284 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 KLHL18O94889 574 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 NSA2O95478 260 aaKnown RBP12.01□□□□□ -0.49
SMN1-202ENST00000380707 CAPNS1P04632 268 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 JUNP05412 331 aaKnown RBP12.01□□□□□ -0.49
SMN1-202ENST00000380707 KLK3P07288 261 aaPredicted RBP12.01□□□□□ -0.49
SMN1-202ENST00000380707 CCNYL3P0C7X3 344 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 LINC00032P0C843 101 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 HSD3B1P14060 373 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 HSD3B2P26439 372 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 BTN3A2P78410 334 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 ZNF33BQ06732 778 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 CSTF3Q12996 717 aaKnown RBP12.01□□□□□ -0.49
SMN1-202ENST00000380707 SLC9A5Q14940 896 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 TGIF1Q15583 401 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 NKAIN1Q4KMZ8 207 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 PRMT9Q6P2P2 845 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 TRIM40Q6P9F5 258 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 ZNF793Q6ZN11 406 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 NLGN4XQ8N0W4 816 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 GBP7Q8N8V2 638 aaPredicted RBP12.01□□□□□ -0.49
SMN1-202ENST00000380707 AMER3Q8N944 861 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 NLGN4YQ8NFZ3 816 aaPredicted RBP12.01□□□□□ -0.49
SMN1-202ENST00000380707 TWIST2Q8WVJ9 160 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 FGF11Q92914 225 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 MR1Q95460 341 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 RGMAQ96B86 450 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 FAR2Q96K12 515 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 QRFPRQ96P65 431 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 KCNC2Q96PR1 638 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 SERPINI1Q99574 410 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 ZNF717Q9BY31 904 aaPredicted RBP12.01□□□□□ -0.49
SMN1-202ENST00000380707 MRPL1Q9BYD6 325 aaKnown RBP12.01□□□□□ -0.49
SMN1-202ENST00000380707 CHST8Q9H2A9 424 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 ZNF304Q9HCX3 659 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 VPS29Q9UBQ0 182 aa12.01□□□□□ -0.49
SMN1-202ENST00000380707 APC2O95996 2303 aa12□□□□□ -0.49
SMN1-202ENST00000380707 PIP5K1BO14986 540 aa12□□□□□ -0.49
SMN1-202ENST00000380707 TLX3O43711 291 aaPredicted RBP12□□□□□ -0.49
SMN1-202ENST00000380707 RAD1O60671 282 aa12□□□□□ -0.49
SMN1-202ENST00000380707 RDH16O75452 317 aa12□□□□□ -0.49
SMN1-202ENST00000380707 SKAP2O75563 359 aaPredicted RBP12□□□□□ -0.49
SMN1-202ENST00000380707 CHEK2O96017 543 aa12□□□□□ -0.49
SMN1-202ENST00000380707 BSGP35613 385 aa12□□□□□ -0.49
SMN1-202ENST00000380707 AVPR1BP47901 424 aa12□□□□□ -0.49
SMN1-202ENST00000380707 RAP1GDS1P52306 607 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms