RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 DLEU7Q6UYE1 221 aa10.4□□□□□ -0.75
NEDD9-201ENST00000379433 TMEM102Q8N9M5 508 aaPredicted RBP10.4□□□□□ -0.75
NEDD9-201ENST00000379433 STARD8Q92502 1023 aa10.4□□□□□ -0.75
NEDD9-201ENST00000379433 TFGQ92734 400 aaPredicted RBP10.4□□□□□ -0.75
NEDD9-201ENST00000379433 GTF2H4Q92759 462 aa10.4□□□□□ -0.75
NEDD9-201ENST00000379433 MAGED4Q96JG8 741 aa10.4□□□□□ -0.75
NEDD9-201ENST00000379433 NTMT1Q9BV86 223 aa10.4□□□□□ -0.75
NEDD9-201ENST00000379433 KLHL25Q9H0H3 589 aa10.4□□□□□ -0.75
NEDD9-201ENST00000379433 SLC25A37Q9NYZ2 338 aa10.4□□□□□ -0.75
NEDD9-201ENST00000379433 VPS29Q9UBQ0 182 aa10.4□□□□□ -0.75
NEDD9-201ENST00000379433 ATP6V1HQ9UI12 483 aa10.4□□□□□ -0.75
NEDD9-201ENST00000379433 PPT2Q9UMR5 302 aa10.4□□□□□ -0.75
NEDD9-201ENST00000379433 BTBD3Q9Y2F9 522 aa10.4□□□□□ -0.75
NEDD9-201ENST00000379433 DMDP11532 3685 aa10.39□□□□□ -0.75
NEDD9-201ENST00000379433 H0Y858 1186 aa10.39□□□□□ -0.75
NEDD9-201ENST00000379433 H7BY64 318 aa10.39□□□□□ -0.75
NEDD9-201ENST00000379433 AGRPO00253 132 aa10.39□□□□□ -0.75
NEDD9-201ENST00000379433 ASGR2P07307 311 aa10.39□□□□□ -0.75
NEDD9-201ENST00000379433 LAMP1P11279 417 aa10.39□□□□□ -0.75
NEDD9-201ENST00000379433 CDH1P12830 882 aa10.39□□□□□ -0.75
NEDD9-201ENST00000379433 SLC7A1P30825 629 aa10.39□□□□□ -0.75
NEDD9-201ENST00000379433 YAP1P46937 504 aaKnown RBP10.39□□□□□ -0.75
NEDD9-201ENST00000379433 PCYT1AP49585 367 aa10.39□□□□□ -0.75
NEDD9-201ENST00000379433 CYP4F3Q08477 520 aa10.39□□□□□ -0.75
NEDD9-201ENST00000379433 C16orf72Q14CZ0 275 aa10.39□□□□□ -0.75
NEDD9-201ENST00000379433 PON2Q15165 354 aa10.39□□□□□ -0.75
NEDD9-201ENST00000379433 CST6Q15828 149 aa10.39□□□□□ -0.75
NEDD9-201ENST00000379433 SPATS1Q496A3 300 aa10.39□□□□□ -0.75
NEDD9-201ENST00000379433 AARDQ4LEZ3 155 aa10.39□□□□□ -0.75
NEDD9-201ENST00000379433 TTC23LQ6PF05 361 aa10.39□□□□□ -0.75
NEDD9-201ENST00000379433 AMZ2Q86W34 360 aa10.39□□□□□ -0.75
NEDD9-201ENST00000379433 WFIKKN2Q8TEU8 576 aa10.39□□□□□ -0.75
NEDD9-201ENST00000379433 COL26A1Q96A83 441 aa10.39□□□□□ -0.75
NEDD9-201ENST00000379433 PRAP1Q96NZ9 151 aa10.39□□□□□ -0.75
NEDD9-201ENST00000379433 SLC52A3Q9NQ40 469 aa10.39□□□□□ -0.75
NEDD9-201ENST00000379433 RAPGEFL1Q9UHV5 662 aa10.39□□□□□ -0.75
NEDD9-201ENST00000379433 ANAPC2Q9UJX6 822 aa10.39□□□□□ -0.75
NEDD9-201ENST00000379433 CCL27Q9Y4X3 112 aa10.39□□□□□ -0.75
NEDD9-201ENST00000379433 PCM1Q15154 2024 aa10.39□□□□□ -0.75
NEDD9-201ENST00000379433 RAB19A4D1S5 217 aa10.39□□□□□ -0.75
NEDD9-201ENST00000379433 GFYI3L273 518 aa10.39□□□□□ -0.75
NEDD9-201ENST00000379433 FKBP9O95302 570 aa10.39□□□□□ -0.75
NEDD9-201ENST00000379433 PRLHRP49683 370 aa10.39□□□□□ -0.75
NEDD9-201ENST00000379433 ZNF542PQ5EBM4 170 aa10.39□□□□□ -0.75
NEDD9-201ENST00000379433 NDUFAF5Q5TEU4 345 aa10.39□□□□□ -0.75
NEDD9-201ENST00000379433 FKBP9P1Q75LS8 142 aa10.39□□□□□ -0.75
NEDD9-201ENST00000379433 SATL1Q86VE3 508 aa10.39□□□□□ -0.75
NEDD9-201ENST00000379433 FAM47BQ8NA70 645 aa10.39□□□□□ -0.75
NEDD9-201ENST00000379433 OR7G3Q8NG95 312 aa10.39□□□□□ -0.75
NEDD9-201ENST00000379433 FBXL20Q96IG2 436 aa10.39□□□□□ -0.75
NEDD9-201ENST00000379433 TPD52L3Q96J77 140 aa10.39□□□□□ -0.75
NEDD9-201ENST00000379433 MNTQ99583 582 aa10.39□□□□□ -0.75
NEDD9-201ENST00000379433 BTBD2Q9BX70 525 aa10.39□□□□□ -0.75
NEDD9-201ENST00000379433 PPP1R14DQ9NXH3 145 aa10.39□□□□□ -0.75
NEDD9-201ENST00000379433 ACSL6Q9UKU0 697 aa10.39□□□□□ -0.75
NEDD9-201ENST00000379433 KPNA5O15131 536 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 SLCO2B1O94956 709 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 C1orf105O95561 183 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 GSTM1P09488 218 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 PFKLP17858 780 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 FCARP24071 287 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 HRH2P25021 359 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 SOAT1P35610 550 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 KIR3DL1P43629 444 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 SSTP61278 116 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 CAMK2GQ13555 558 aaPredicted RBP10.38□□□□□ -0.75
NEDD9-201ENST00000379433 NDUFA5Q16718 116 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 FAM209BQ5JX69 171 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 ZNF574Q6ZN55 896 aaPredicted RBP10.38□□□□□ -0.75
NEDD9-201ENST00000379433 LRRC70Q7Z2Q7 622 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 DSG4Q86SJ6 1040 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 ZNF786Q8N393 782 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 NKAIN3Q8N8D7 197 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 TTLQ8NG68 377 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 OTUB1Q96FW1 271 aaPredicted RBP10.38□□□□□ -0.75
NEDD9-201ENST00000379433 TRIM15Q9C019 465 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 RDH14Q9HBH5 336 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 TRIM39Q9HCM9 518 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 EXD2Q9NVH0 621 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 DYRK1BQ9Y463 629 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 ANKRD28O15084 1053 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 PRKD3O94806 890 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 OPN1SWP03999 348 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 KLK1P06870 262 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 PABPC4LP0CB38 370 aaKnown RBP10.38□□□□□ -0.75
NEDD9-201ENST00000379433 DRD3P35462 400 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 HNMTP50135 292 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 MAPK10P53779 464 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 ILF2Q12905 390 aaKnown RBP10.38□□□□□ -0.75
NEDD9-201ENST00000379433 USP39Q53GS9 565 aaKnown RBP10.38□□□□□ -0.75
NEDD9-201ENST00000379433 CAPN13Q6MZZ7 669 aaPredicted RBP10.38□□□□□ -0.75
NEDD9-201ENST00000379433 GPR149Q86SP6 731 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 GATA6Q92908 595 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 C12orf66Q96MD2 445 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 ZCCHC2Q9C0B9 1178 aaKnown RBP10.38□□□□□ -0.75
NEDD9-201ENST00000379433 ACTR3BQ9P1U1 418 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 ZNF69Q9UC07 566 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 NDRG2Q9UN36 371 aaKnown RBP10.38□□□□□ -0.75
NEDD9-201ENST00000379433 A0A1W2PQU0 124 aa10.38□□□□□ -0.75
NEDD9-201ENST00000379433 GLOD5A6NK44 160 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms