RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 GABRG3Q99928 467 aa10.04□□□□□ -0.8
POLR2J3-201ENST00000379340 LGR4Q9BXB1 951 aa10.04□□□□□ -0.8
POLR2J3-201ENST00000379340 TRIM4Q9C037 500 aa10.04□□□□□ -0.8
POLR2J3-201ENST00000379340 IRF2BPLQ9H1B7 796 aa10.04□□□□□ -0.8
POLR2J3-201ENST00000379340 S1PR5Q9H228 398 aa10.04□□□□□ -0.8
POLR2J3-201ENST00000379340 TM9SF3Q9HD45 589 aa10.04□□□□□ -0.8
POLR2J3-201ENST00000379340 IL1RAPQ9NPH3 570 aa10.04□□□□□ -0.8
POLR2J3-201ENST00000379340 PAPOLBQ9NRJ5 636 aaKnown RBP10.04□□□□□ -0.8
POLR2J3-201ENST00000379340 SH3BP4Q9P0V3 963 aa10.04□□□□□ -0.8
POLR2J3-201ENST00000379340 SLC23A2Q9UGH3 650 aa10.04□□□□□ -0.8
POLR2J3-201ENST00000379340 BAG5Q9UL15 447 aa10.04□□□□□ -0.8
POLR2J3-201ENST00000379340 FZD4Q9ULV1 537 aa10.04□□□□□ -0.8
POLR2J3-201ENST00000379340 BTBD3Q9Y2F9 522 aa10.04□□□□□ -0.8
POLR2J3-201ENST00000379340 TDRKHQ9Y2W6 561 aaKnown RBP10.04□□□□□ -0.8
POLR2J3-201ENST00000379340 MYO10Q9HD67 2058 aa10.04□□□□□ -0.8
POLR2J3-201ENST00000379340 K7EQS6 105 aa10.03□□□□□ -0.8
POLR2J3-201ENST00000379340 E2F6O75461 281 aa10.03□□□□□ -0.8
POLR2J3-201ENST00000379340 ZNF682O95780 498 aa10.03□□□□□ -0.8
POLR2J3-201ENST00000379340 TGFB1P01137 390 aa10.03□□□□□ -0.8
POLR2J3-201ENST00000379340 DNTTP04053 509 aa10.03□□□□□ -0.8
POLR2J3-201ENST00000379340 FABP3P05413 133 aa10.03□□□□□ -0.8
POLR2J3-201ENST00000379340 TTKP33981 857 aa10.03□□□□□ -0.8
POLR2J3-201ENST00000379340 DCTP40126 519 aa10.03□□□□□ -0.8
POLR2J3-201ENST00000379340 PEX19P40855 299 aa10.03□□□□□ -0.8
POLR2J3-201ENST00000379340 WASP42768 502 aa10.03□□□□□ -0.8
POLR2J3-201ENST00000379340 SFSWAPQ12872 951 aaKnown RBP10.03□□□□□ -0.8
POLR2J3-201ENST00000379340 RGNQ15493 299 aa10.03□□□□□ -0.8
POLR2J3-201ENST00000379340 TMEM259Q4ZIN3 620 aa10.03□□□□□ -0.8
POLR2J3-201ENST00000379340 C2orf27AQ580R0 203 aa10.03□□□□□ -0.8
POLR2J3-201ENST00000379340 SPESP1Q6UW49 350 aa10.03□□□□□ -0.8
POLR2J3-201ENST00000379340 TMEM26Q6ZUK4 368 aa10.03□□□□□ -0.8
POLR2J3-201ENST00000379340 SLC9B2Q86UD5 537 aa10.03□□□□□ -0.8
POLR2J3-201ENST00000379340 SLC30A8Q8IWU4 369 aa10.03□□□□□ -0.8
POLR2J3-201ENST00000379340 C8orf59Q8N0T1 100 aaPredicted RBP10.03□□□□□ -0.8
POLR2J3-201ENST00000379340 C11orf65Q8NCR3 313 aa10.03□□□□□ -0.8
POLR2J3-201ENST00000379340 ST13P5Q8NFI4 369 aaPredicted RBP10.03□□□□□ -0.8
POLR2J3-201ENST00000379340 OR4K1Q8NGD4 311 aa10.03□□□□□ -0.8
POLR2J3-201ENST00000379340 FGF14Q92915 247 aa10.03□□□□□ -0.8
POLR2J3-201ENST00000379340 IL17FQ96PD4 163 aa10.03□□□□□ -0.8
POLR2J3-201ENST00000379340 SPNS1Q9H2V7 528 aa10.03□□□□□ -0.8
POLR2J3-201ENST00000379340 OR51B5Q9H339 312 aa10.03□□□□□ -0.8
POLR2J3-201ENST00000379340 PREBQ9HCU5 417 aa10.03□□□□□ -0.8
POLR2J3-201ENST00000379340 ZDHHC4Q9NPG8 344 aa10.03□□□□□ -0.8
POLR2J3-201ENST00000379340 MBNL1Q9NR56 388 aaKnown RBP10.03□□□□□ -0.8
POLR2J3-201ENST00000379340 DDX18Q9NVP1 670 aaKnown RBP10.03□□□□□ -0.8
POLR2J3-201ENST00000379340 ADPRHL2Q9NX46 363 aa10.03□□□□□ -0.8
POLR2J3-201ENST00000379340 TAC3Q9UHF0 121 aa10.03□□□□□ -0.8
POLR2J3-201ENST00000379340 ADAM29Q9UKF5 820 aa10.03□□□□□ -0.8
POLR2J3-201ENST00000379340 ZFR2Q9UPR6 939 aaKnown RBP10.03□□□□□ -0.8
POLR2J3-201ENST00000379340 ICKQ9UPZ9 632 aa10.03□□□□□ -0.8
POLR2J3-201ENST00000379340 EXO1Q9UQ84 846 aaKnown RBP10.03□□□□□ -0.8
POLR2J3-201ENST00000379340 PRKAB1Q9Y478 270 aa10.03□□□□□ -0.8
POLR2J3-201ENST00000379340 PCYT1BQ9Y5K3 369 aaPredicted RBP10.03□□□□□ -0.8
POLR2J3-201ENST00000379340 SPTBN2O15020 2390 aa10.03□□□□□ -0.8
POLR2J3-201ENST00000379340 MYOCOSA0A1B0GUC4 107 aa10.02□□□□□ -0.81
POLR2J3-201ENST00000379340 VILLO15195 856 aa10.02□□□□□ -0.81
POLR2J3-201ENST00000379340 YY2O15391 372 aa10.02□□□□□ -0.81
POLR2J3-201ENST00000379340 NOBOXO60393 691 aa10.02□□□□□ -0.81
POLR2J3-201ENST00000379340 KRT75O95678 551 aa10.02□□□□□ -0.81
POLR2J3-201ENST00000379340 HOXC4P09017 264 aaPredicted RBP10.02□□□□□ -0.81
POLR2J3-201ENST00000379340 GSTM2P28161 218 aa10.02□□□□□ -0.81
POLR2J3-201ENST00000379340 TIE1P35590 1138 aa10.02□□□□□ -0.81
POLR2J3-201ENST00000379340 CLCNKAP51800 687 aa10.02□□□□□ -0.81
POLR2J3-201ENST00000379340 ROR2Q01974 943 aaKnown RBP10.02□□□□□ -0.81
POLR2J3-201ENST00000379340 TOP3AQ13472 1001 aaPredicted RBP10.02□□□□□ -0.81
POLR2J3-201ENST00000379340 SF1Q15637 639 aaKnown RBP10.02□□□□□ -0.81
POLR2J3-201ENST00000379340 ZNF385BQ569K4 471 aa10.02□□□□□ -0.81
POLR2J3-201ENST00000379340 RBM48Q5RL73 367 aaKnown RBP10.02□□□□□ -0.81
POLR2J3-201ENST00000379340 DEPDC1Q5TB30 811 aa10.02□□□□□ -0.81
POLR2J3-201ENST00000379340 KHDRBS2Q5VWX1 349 aaKnown RBP10.02□□□□□ -0.81
POLR2J3-201ENST00000379340 OR2T5Q6IEZ7 315 aa10.02□□□□□ -0.81
POLR2J3-201ENST00000379340 ANKRD26P1Q6NSI1 321 aa10.02□□□□□ -0.81
POLR2J3-201ENST00000379340 TRIM40Q6P9F5 258 aa10.02□□□□□ -0.81
POLR2J3-201ENST00000379340 B3GNT6Q6ZMB0 384 aa10.02□□□□□ -0.81
POLR2J3-201ENST00000379340 VN1R5Q7Z5H4 357 aa10.02□□□□□ -0.81
POLR2J3-201ENST00000379340 THAP5Q7Z6K1 395 aa10.02□□□□□ -0.81
POLR2J3-201ENST00000379340 ARL10Q8N8L6 244 aa10.02□□□□□ -0.81
POLR2J3-201ENST00000379340 TTLQ8NG68 377 aa10.02□□□□□ -0.81
POLR2J3-201ENST00000379340 OR52N2Q8NGI0 321 aa10.02□□□□□ -0.81
POLR2J3-201ENST00000379340 OR2T29Q8NH02 315 aa10.02□□□□□ -0.81
POLR2J3-201ENST00000379340 WDR48Q8TAF3 677 aa10.02□□□□□ -0.81
POLR2J3-201ENST00000379340 GANCQ8TET4 914 aa10.02□□□□□ -0.81
POLR2J3-201ENST00000379340 MENTQ9BUN1 341 aa10.02□□□□□ -0.81
POLR2J3-201ENST00000379340 MS4A8Q9BY19 250 aa10.02□□□□□ -0.81
POLR2J3-201ENST00000379340 SLC17A9Q9BYT1 436 aa10.02□□□□□ -0.81
POLR2J3-201ENST00000379340 TMEM38AQ9H6F2 299 aa10.02□□□□□ -0.81
POLR2J3-201ENST00000379340 MVB12BQ9H7P6 319 aa10.02□□□□□ -0.81
POLR2J3-201ENST00000379340 FBXL12Q9NXK8 326 aa10.02□□□□□ -0.81
POLR2J3-201ENST00000379340 TAS2R9Q9NYW1 312 aa10.02□□□□□ -0.81
POLR2J3-201ENST00000379340 SERGEFQ9UGK8 458 aa10.02□□□□□ -0.81
POLR2J3-201ENST00000379340 PLAGL1Q9UM63 463 aa10.02□□□□□ -0.81
POLR2J3-201ENST00000379340 FAF1Q9UNN5 650 aaPredicted RBP10.02□□□□□ -0.81
POLR2J3-201ENST00000379340 SLC17A4Q9Y2C5 497 aa10.02□□□□□ -0.81
POLR2J3-201ENST00000379340 TICRRQ7Z2Z1 1910 aa10.02□□□□□ -0.81
POLR2J3-201ENST00000379340 A0A1W2PQU0 124 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 CCDC160A6NGH7 325 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 PRR19A6NJB7 356 aa10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 ZNF701M0R085 212 aaPredicted RBP10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 CACNB4O00305 520 aaPredicted RBP10.01□□□□□ -0.81
POLR2J3-201ENST00000379340 CAPN5O15484 640 aaPredicted RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms