RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 NPRL3Q12980 569 aa12.87□□□□□ -0.35
HIPK3-202ENST00000379016 SLC22A16Q86VW1 577 aa12.87□□□□□ -0.35
HIPK3-202ENST00000379016 HNRNPLLQ8WVV9 542 aaKnown RBP12.87□□□□□ -0.35
HIPK3-202ENST00000379016 VCPIP1Q96JH7 1222 aa12.87□□□□□ -0.35
HIPK3-202ENST00000379016 COG8Q96MW5 612 aa12.87□□□□□ -0.35
HIPK3-202ENST00000379016 S100A14Q9HCY8 104 aa12.87□□□□□ -0.35
HIPK3-202ENST00000379016 DHDHQ9UQ10 334 aa12.87□□□□□ -0.35
HIPK3-202ENST00000379016 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.87□□□□□ -0.35
HIPK3-202ENST00000379016 NEMP2A6NFY4 417 aa12.87□□□□□ -0.35
HIPK3-202ENST00000379016 DUXAA6NLW8 204 aa12.87□□□□□ -0.35
HIPK3-202ENST00000379016 SCAF4O95104 1147 aaKnown RBP12.87□□□□□ -0.35
HIPK3-202ENST00000379016 CD79AP11912 226 aa12.87□□□□□ -0.35
HIPK3-202ENST00000379016 S1PR1P21453 382 aa12.87□□□□□ -0.35
HIPK3-202ENST00000379016 DPP6P42658 865 aa12.87□□□□□ -0.35
HIPK3-202ENST00000379016 MC2RQ01718 297 aa12.87□□□□□ -0.35
HIPK3-202ENST00000379016 CST9LP1Q5W188 147 aa12.87□□□□□ -0.35
HIPK3-202ENST00000379016 BAIAP2L2Q6UXY1 529 aa12.87□□□□□ -0.35
HIPK3-202ENST00000379016 MARVELD2Q8N4S9 558 aa12.87□□□□□ -0.35
HIPK3-202ENST00000379016 C3orf58Q8NDZ4 430 aa12.87□□□□□ -0.35
HIPK3-202ENST00000379016 ACTR6Q9GZN1 396 aa12.87□□□□□ -0.35
HIPK3-202ENST00000379016 ERI3O43414 337 aaKnown RBP12.87□□□□□ -0.35
HIPK3-202ENST00000379016 ATG12O94817 140 aa12.87□□□□□ -0.35
HIPK3-202ENST00000379016 CD9P21926 228 aa12.87□□□□□ -0.35
HIPK3-202ENST00000379016 OTX2P32243 289 aa12.87□□□□□ -0.35
HIPK3-202ENST00000379016 NUS1Q96E22 293 aa12.87□□□□□ -0.35
HIPK3-202ENST00000379016 MAFBQ9Y5Q3 323 aaPredicted RBP12.87□□□□□ -0.35
HIPK3-202ENST00000379016 SH2D7A6NKC9 451 aaPredicted RBP12.87□□□□□ -0.35
HIPK3-202ENST00000379016 YY2O15391 372 aa12.87□□□□□ -0.35
HIPK3-202ENST00000379016 GLRA2P23416 452 aa12.87□□□□□ -0.35
HIPK3-202ENST00000379016 CLCQ05315 142 aa12.87□□□□□ -0.35
HIPK3-202ENST00000379016 BPHLQ86WA6 291 aaPredicted RBP12.87□□□□□ -0.35
HIPK3-202ENST00000379016 OR2AP1Q8NGE2 309 aa12.87□□□□□ -0.35
HIPK3-202ENST00000379016 PCDHGC4Q9Y5F7 938 aa12.87□□□□□ -0.35
HIPK3-202ENST00000379016 TSPAN6O43657 245 aa12.87□□□□□ -0.35
HIPK3-202ENST00000379016 SCO2O43819 266 aa12.87□□□□□ -0.35
HIPK3-202ENST00000379016 OPN1SWP03999 348 aa12.87□□□□□ -0.35
HIPK3-202ENST00000379016 LGALS2P05162 132 aa12.87□□□□□ -0.35
HIPK3-202ENST00000379016 TIGD3Q6B0B8 471 aa12.87□□□□□ -0.35
HIPK3-202ENST00000379016 PWWP2AQ96N64 755 aa12.87□□□□□ -0.35
HIPK3-202ENST00000379016 IL36AQ9UHA7 158 aa12.87□□□□□ -0.35
HIPK3-202ENST00000379016 RCBTB2O95199 551 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 ERBB2P04626 1255 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 ACRP10323 421 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 RAB35Q15286 201 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 VWA5B1Q5TIE3 1220 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 ZNF695Q8IW36 515 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 GPC2Q8N158 579 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 AQP11Q8NBQ7 271 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 ZNF675Q8TD23 568 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 HOXB13Q92826 284 aaPredicted RBP12.86□□□□□ -0.35
HIPK3-202ENST00000379016 CDK15Q96Q40 435 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 OR51I1Q9H343 314 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 PFKLP17858 780 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 CYP3A5P20815 502 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 NUDT6P53370 316 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 BEST3Q8N1M1 668 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 SVOPLQ8N434 492 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 TRAM1L1Q8N609 369 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 AGBL3Q8NEM8 1001 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 CYP2S1Q96SQ9 504 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 Q9N2J8 555 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 CACNG4Q9UBN1 327 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 NENFQ9UMX5 172 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 ANKRD63C9JTQ0 380 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 BHLHE40O14503 412 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 CRXO43186 299 aaPredicted RBP12.86□□□□□ -0.35
HIPK3-202ENST00000379016 SLC7A4O43246 635 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 HMGN1P05114 100 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 MATN1P21941 496 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 BRCC3P46736 316 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 RPS3AP61247 264 aaKnown RBP12.86□□□□□ -0.35
HIPK3-202ENST00000379016 RPP30P78346 268 aaKnown RBP12.86□□□□□ -0.35
HIPK3-202ENST00000379016 ESPNLQ6ZVH7 1005 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 SLC15A3Q8IY34 581 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 FAM156AQ8NDB6 213 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 METTL2AQ96IZ6 378 aaKnown RBP12.86□□□□□ -0.35
HIPK3-202ENST00000379016 SLCO1B3Q9NPD5 702 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 TMEM51Q9NW97 253 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 H3BQF6 201 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 SLURP2P0DP57 97 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 GDI1P31150 447 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 GABRA2P47869 451 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 DEFB115Q30KQ5 88 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 TPRG1LQ5T0D9 272 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 SFRP5Q5T4F7 317 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 ZNF767PQ75MW2 155 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 GCC2Q8IWJ2 1684 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 AK4P27144 223 aaPredicted RBP12.86□□□□□ -0.35
HIPK3-202ENST00000379016 AQP2P41181 271 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 GLUD2P49448 558 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 C9orf152Q5JTZ5 239 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 FAM69BQ5VUD6 431 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 MMAAQ8IVH4 418 aaKnown RBP12.86□□□□□ -0.35
HIPK3-202ENST00000379016 SAMD14Q8IZD0 417 aaPredicted RBP12.86□□□□□ -0.35
HIPK3-202ENST00000379016 CNOT9Q92600 299 aaKnown RBP12.86□□□□□ -0.35
HIPK3-202ENST00000379016 ESAMQ96AP7 390 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 TGM7Q96PF1 710 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 OR8D2Q9GZM6 311 aa12.86□□□□□ -0.35
HIPK3-202ENST00000379016 ZNF395Q9H8N7 513 aaPredicted RBP12.86□□□□□ -0.35
HIPK3-202ENST00000379016 CXorf21Q9HAI6 301 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms