RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 NKG7Q16617 165 aa17.76■□□□□ 0.43
SSU72-203ENST00000378725 DEFB134Q4QY38 66 aa17.76■□□□□ 0.43
SSU72-203ENST00000378725 TMEM35AQ53FP2 167 aa17.76■□□□□ 0.43
SSU72-203ENST00000378725 DEPDC1Q5TB30 811 aa17.76■□□□□ 0.43
SSU72-203ENST00000378725 ABHD17CQ6PCB6 329 aa17.76■□□□□ 0.43
SSU72-203ENST00000378725 INO80CQ6PI98 192 aaPredicted RBP17.76■□□□□ 0.43
SSU72-203ENST00000378725 CHSY3Q70JA7 882 aa17.76■□□□□ 0.43
SSU72-203ENST00000378725 RNF175Q8N4F7 328 aa17.76■□□□□ 0.43
SSU72-203ENST00000378725 SRFBP1Q8NEF9 429 aaKnown RBP17.76■□□□□ 0.43
SSU72-203ENST00000378725 QRFPRQ96P65 431 aa17.76■□□□□ 0.43
SSU72-203ENST00000378725 F2RL3Q96RI0 385 aa17.76■□□□□ 0.43
SSU72-203ENST00000378725 MTERF1Q99551 399 aaKnown RBP17.76■□□□□ 0.43
SSU72-203ENST00000378725 TRMOQ9BU70 441 aa17.76■□□□□ 0.43
SSU72-203ENST00000378725 SLC29A3Q9BZD2 475 aa17.76■□□□□ 0.43
SSU72-203ENST00000378725 TGIF2Q9GZN2 237 aa17.76■□□□□ 0.43
SSU72-203ENST00000378725 ACTL8Q9H568 366 aa17.76■□□□□ 0.43
SSU72-203ENST00000378725 ZNF446Q9NWS9 450 aa17.76■□□□□ 0.43
SSU72-203ENST00000378725 ZNF282Q9UDV7 671 aaPredicted RBP17.76■□□□□ 0.43
SSU72-203ENST00000378725 URB1O60287 2271 aaKnown RBP17.75■□□□□ 0.43
SSU72-203ENST00000378725 IGF2RP11717 2491 aa17.75■□□□□ 0.43
SSU72-203ENST00000378725 TMEM120BA0PK00 339 aa17.75■□□□□ 0.43
SSU72-203ENST00000378725 MAGEB17A8MXT2 336 aa17.75■□□□□ 0.43
SSU72-203ENST00000378725 FFAR3O14843 346 aa17.75■□□□□ 0.43
SSU72-203ENST00000378725 GPR42O15529 346 aa17.75■□□□□ 0.43
SSU72-203ENST00000378725 B3GALT4O96024 378 aa17.75■□□□□ 0.43
SSU72-203ENST00000378725 ENO1P06733 434 aaKnown RBP17.75■□□□□ 0.43
SSU72-203ENST00000378725 CCR10P46092 362 aa17.75■□□□□ 0.43
SSU72-203ENST00000378725 ARFIP1P53367 373 aa17.75■□□□□ 0.43
SSU72-203ENST00000378725 RPS13P62277 151 aaKnown RBP17.75■□□□□ 0.43
SSU72-203ENST00000378725 SKP1P63208 163 aa17.75■□□□□ 0.43
SSU72-203ENST00000378725 PHEXP78562 749 aa17.75■□□□□ 0.43
SSU72-203ENST00000378725 VAC14Q08AM6 782 aa17.75■□□□□ 0.43
SSU72-203ENST00000378725 GALNT1Q10472 559 aaPredicted RBP17.75■□□□□ 0.43
SSU72-203ENST00000378725 IFT88Q13099 833 aa17.75■□□□□ 0.43
SSU72-203ENST00000378725 CUL3Q13618 768 aa17.75■□□□□ 0.43
SSU72-203ENST00000378725 KHDRBS2Q5VWX1 349 aaKnown RBP17.75■□□□□ 0.43
SSU72-203ENST00000378725 TTC19Q6DKK2 380 aaPredicted RBP17.75■□□□□ 0.43
SSU72-203ENST00000378725 UBE3DQ7Z6J8 389 aa17.75■□□□□ 0.43
SSU72-203ENST00000378725 NUDCD3Q8IVD9 361 aa17.75■□□□□ 0.43
SSU72-203ENST00000378725 CDYL2Q8N8U2 506 aa17.75■□□□□ 0.43
SSU72-203ENST00000378725 SREK1Q8WXA9 508 aaKnown RBP17.75■□□□□ 0.43
SSU72-203ENST00000378725 STARD8Q92502 1023 aa17.75■□□□□ 0.43
SSU72-203ENST00000378725 MTFMTQ96DP5 389 aaKnown RBP17.75■□□□□ 0.43
SSU72-203ENST00000378725 ATP6V1G3Q96LB4 118 aa17.75■□□□□ 0.43
SSU72-203ENST00000378725 CPNE5Q9HCH3 593 aa17.75■□□□□ 0.43
SSU72-203ENST00000378725 MID1IP1Q9NPA3 183 aa17.75■□□□□ 0.43
SSU72-203ENST00000378725 MKKSQ9NPJ1 570 aaPredicted RBP17.75■□□□□ 0.43
SSU72-203ENST00000378725 PRDM7Q9NQW5 492 aa17.75■□□□□ 0.43
SSU72-203ENST00000378725 TRPC4Q9UBN4 977 aa17.75■□□□□ 0.43
SSU72-203ENST00000378725 CTSFQ9UBX1 484 aa17.75■□□□□ 0.43
SSU72-203ENST00000378725 SNX6Q9UNH7 406 aa17.75■□□□□ 0.43
SSU72-203ENST00000378725 PADI2Q9Y2J8 665 aa17.75■□□□□ 0.43
SSU72-203ENST00000378725 AHCTF1Q8WYP5 2266 aa17.75■□□□□ 0.43
SSU72-203ENST00000378725 ZNF891A8MT65 544 aaPredicted RBP17.74■□□□□ 0.43
SSU72-203ENST00000378725 ERI3O43414 337 aaKnown RBP17.74■□□□□ 0.43
SSU72-203ENST00000378725 DNAJB6O75190 326 aa17.74■□□□□ 0.43
SSU72-203ENST00000378725 SERPINB5P36952 375 aa17.74■□□□□ 0.43
SSU72-203ENST00000378725 RPS18P62269 152 aaKnown RBP17.74■□□□□ 0.43
SSU72-203ENST00000378725 BTN3A2P78410 334 aa17.74■□□□□ 0.43
SSU72-203ENST00000378725 MAT1AQ00266 395 aaKnown RBP17.74■□□□□ 0.43
SSU72-203ENST00000378725 MC1RQ01726 317 aa17.74■□□□□ 0.43
SSU72-203ENST00000378725 OCA2Q04671 838 aa17.74■□□□□ 0.43
SSU72-203ENST00000378725 ZNF33BQ06732 778 aa17.74■□□□□ 0.43
SSU72-203ENST00000378725 TGM3Q08188 693 aa17.74■□□□□ 0.43
SSU72-203ENST00000378725 DDX39BQ13838 428 aaKnown RBP17.74■□□□□ 0.43
SSU72-203ENST00000378725 SYT16Q17RD7 645 aa17.74■□□□□ 0.43
SSU72-203ENST00000378725 TTMPQ5BVD1 217 aa17.74■□□□□ 0.43
SSU72-203ENST00000378725 TRIM40Q6P9F5 258 aa17.74■□□□□ 0.43
SSU72-203ENST00000378725 ZSCAN1Q8NBB4 408 aa17.74■□□□□ 0.43
SSU72-203ENST00000378725 OR2Y1Q8NGV0 311 aa17.74■□□□□ 0.43
SSU72-203ENST00000378725 OR51Q1Q8NH59 317 aa17.74■□□□□ 0.43
SSU72-203ENST00000378725 METTL6Q8TCB7 284 aa17.74■□□□□ 0.43
SSU72-203ENST00000378725 STT3BQ8TCJ2 826 aa17.74■□□□□ 0.43
SSU72-203ENST00000378725 FAR2Q96K12 515 aa17.74■□□□□ 0.43
SSU72-203ENST00000378725 SPSB2Q99619 263 aa17.74■□□□□ 0.43
SSU72-203ENST00000378725 TBCDQ9BTW9 1192 aa17.74■□□□□ 0.43
SSU72-203ENST00000378725 OR51B5Q9H339 312 aa17.74■□□□□ 0.43
SSU72-203ENST00000378725 ELOVL6Q9H5J4 265 aa17.74■□□□□ 0.43
SSU72-203ENST00000378725 NXT1Q9UKK6 140 aaKnown RBP17.74■□□□□ 0.43
SSU72-203ENST00000378725 ACACBO00763 2458 aa17.74■□□□□ 0.43
SSU72-203ENST00000378725 SERTM1A2A2V5 107 aa17.73■□□□□ 0.43
SSU72-203ENST00000378725 MANBAO00462 879 aa17.73■□□□□ 0.43
SSU72-203ENST00000378725 NKX2-8O15522 239 aa17.73■□□□□ 0.43
SSU72-203ENST00000378725 RDH16O75452 317 aa17.73■□□□□ 0.43
SSU72-203ENST00000378725 PDYNP01213 254 aa17.73■□□□□ 0.43
SSU72-203ENST00000378725 KRT6AP02538 564 aa17.73■□□□□ 0.43
SSU72-203ENST00000378725 KRT6BP04259 564 aa17.73■□□□□ 0.43
SSU72-203ENST00000378725 ZGLP1P0C6A0 271 aa17.73■□□□□ 0.43
SSU72-203ENST00000378725 ATXN8OSP0DMR3 200 aa17.73■□□□□ 0.43
SSU72-203ENST00000378725 IL10P22301 178 aa17.73■□□□□ 0.43
SSU72-203ENST00000378725 KRT6CP48668 564 aa17.73■□□□□ 0.43
SSU72-203ENST00000378725 PLA2G16P53816 162 aa17.73■□□□□ 0.43
SSU72-203ENST00000378725 WDR4P57081 412 aaKnown RBP17.73■□□□□ 0.43
SSU72-203ENST00000378725 SSPNQ14714 243 aa17.73■□□□□ 0.43
SSU72-203ENST00000378725 VWA2Q5GFL6 755 aa17.73■□□□□ 0.43
SSU72-203ENST00000378725 FAM69BQ5VUD6 431 aa17.73■□□□□ 0.43
SSU72-203ENST00000378725 MED25Q71SY5 747 aa17.73■□□□□ 0.43
SSU72-203ENST00000378725 SHISA5Q8N114 240 aa17.73■□□□□ 0.43
SSU72-203ENST00000378725 SELENOMQ8WWX9 145 aa17.73■□□□□ 0.43
SSU72-203ENST00000378725 MIEF2Q96C03 454 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms