RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 LINGO2Q7L985 606 aa8.46□□□□□ -1.05
PCDH9-202ENST00000377865 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.46□□□□□ -1.05
PCDH9-202ENST00000377865 RNF130Q86XS8 419 aa8.46□□□□□ -1.05
PCDH9-202ENST00000377865 NPAS4Q8IUM7 802 aa8.46□□□□□ -1.05
PCDH9-202ENST00000377865 CFAP206Q8IYR0 622 aa8.46□□□□□ -1.05
PCDH9-202ENST00000377865 SIMC1Q8NDZ2 872 aa8.46□□□□□ -1.05
PCDH9-202ENST00000377865 OR10H4Q8NGA5 316 aa8.46□□□□□ -1.05
PCDH9-202ENST00000377865 BBS10Q8TAM1 723 aa8.46□□□□□ -1.05
PCDH9-202ENST00000377865 SNX33Q8WV41 574 aa8.46□□□□□ -1.05
PCDH9-202ENST00000377865 SUSD6Q92537 303 aa8.46□□□□□ -1.05
PCDH9-202ENST00000377865 OSTF1Q92882 214 aa8.46□□□□□ -1.05
PCDH9-202ENST00000377865 TXNDC15Q96J42 360 aa8.46□□□□□ -1.05
PCDH9-202ENST00000377865 TMED9Q9BVK6 235 aa8.46□□□□□ -1.05
PCDH9-202ENST00000377865 BTNL2Q9UIR0 455 aa8.46□□□□□ -1.05
PCDH9-202ENST00000377865 OR2B3O76000 313 aa8.46□□□□□ -1.06
PCDH9-202ENST00000377865 CLDN7O95471 211 aa8.46□□□□□ -1.06
PCDH9-202ENST00000377865 PRAMEF12O95522 483 aa8.46□□□□□ -1.06
PCDH9-202ENST00000377865 LCKP06239 509 aa8.46□□□□□ -1.06
PCDH9-202ENST00000377865 BMP4P12644 408 aa8.46□□□□□ -1.06
PCDH9-202ENST00000377865 RPL10P27635 214 aaKnown RBP8.46□□□□□ -1.06
PCDH9-202ENST00000377865 GABRB3P28472 473 aa8.46□□□□□ -1.06
PCDH9-202ENST00000377865 TIA1P31483 386 aaKnown RBP eCLIP8.46□□□□□ -1.06
PCDH9-202ENST00000377865 HTR2BP41595 481 aa8.46□□□□□ -1.06
PCDH9-202ENST00000377865 ARL4DP49703 201 aa8.46□□□□□ -1.06
PCDH9-202ENST00000377865 HTR6P50406 440 aa8.46□□□□□ -1.06
PCDH9-202ENST00000377865 ELOAQ14241 798 aaKnown RBP8.46□□□□□ -1.06
PCDH9-202ENST00000377865 ELMOD2Q8IZ81 293 aa8.46□□□□□ -1.06
PCDH9-202ENST00000377865 TMEM130Q8N3G9 435 aa8.46□□□□□ -1.06
PCDH9-202ENST00000377865 DNAJA4Q8WW22 397 aaPredicted RBP8.46□□□□□ -1.06
PCDH9-202ENST00000377865 NT5C3BQ969T7 300 aa8.46□□□□□ -1.06
PCDH9-202ENST00000377865 COL26A1Q96A83 441 aa8.46□□□□□ -1.06
PCDH9-202ENST00000377865 NUMBLQ9Y6R0 609 aa8.46□□□□□ -1.06
PCDH9-202ENST00000377865 MROH6A6NGR9 719 aa8.46□□□□□ -1.06
PCDH9-202ENST00000377865 SLC16A6O15403 523 aa8.46□□□□□ -1.06
PCDH9-202ENST00000377865 LDB2O43679 373 aa8.46□□□□□ -1.06
PCDH9-202ENST00000377865 TLL1O43897 1013 aa8.46□□□□□ -1.06
PCDH9-202ENST00000377865 PRNPP04156 253 aa8.46□□□□□ -1.06
PCDH9-202ENST00000377865 RLN1P04808 185 aa8.46□□□□□ -1.06
PCDH9-202ENST00000377865 HOXD8P13378 290 aaPredicted RBP8.46□□□□□ -1.06
PCDH9-202ENST00000377865 TCEA1P23193 301 aaKnown RBP8.46□□□□□ -1.06
PCDH9-202ENST00000377865 ZNF140P52738 457 aaPredicted RBP8.46□□□□□ -1.06
PCDH9-202ENST00000377865 GBX2P52951 348 aaPredicted RBP8.46□□□□□ -1.06
PCDH9-202ENST00000377865 ZNF598Q86UK7 904 aaKnown RBP8.46□□□□□ -1.06
PCDH9-202ENST00000377865 TCEANCQ8N8B7 351 aa8.46□□□□□ -1.06
PCDH9-202ENST00000377865 OR5AK3PQ8NH89 298 aa8.46□□□□□ -1.06
PCDH9-202ENST00000377865 TMEM203Q969S6 136 aa8.46□□□□□ -1.06
PCDH9-202ENST00000377865 MOAP1Q96BY2 351 aa8.46□□□□□ -1.06
PCDH9-202ENST00000377865 C11orf84Q9BUA3 381 aaPredicted RBP8.46□□□□□ -1.06
PCDH9-202ENST00000377865 RAB11FIP5Q9BXF6 653 aa8.46□□□□□ -1.06
PCDH9-202ENST00000377865 TP63Q9H3D4 680 aaPredicted RBP8.46□□□□□ -1.06
PCDH9-202ENST00000377865 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.46□□□□□ -1.06
PCDH9-202ENST00000377865 MAP10Q9P2G4 905 aa8.46□□□□□ -1.06
PCDH9-202ENST00000377865 CACNG4Q9UBN1 327 aa8.46□□□□□ -1.06
PCDH9-202ENST00000377865 FAM170BA6NMN3 283 aa8.46□□□□□ -1.06
PCDH9-202ENST00000377865 ZBTB42B2RXF5 422 aa8.46□□□□□ -1.06
PCDH9-202ENST00000377865 NEDD8-MDP1E9PL57 170 aa8.46□□□□□ -1.06
PCDH9-202ENST00000377865 UGDHO60701 494 aa8.46□□□□□ -1.06
PCDH9-202ENST00000377865 SULT1C4O75897 302 aa8.46□□□□□ -1.06
PCDH9-202ENST00000377865 SAGP10523 405 aaPredicted RBP8.46□□□□□ -1.06
PCDH9-202ENST00000377865 ANXA3P12429 323 aa8.46□□□□□ -1.06
PCDH9-202ENST00000377865 GGT5P36269 586 aa8.46□□□□□ -1.06
PCDH9-202ENST00000377865 SLC9A3P48764 834 aa8.46□□□□□ -1.06
PCDH9-202ENST00000377865 CDH11P55287 796 aa8.46□□□□□ -1.06
PCDH9-202ENST00000377865 RPS13P62277 151 aaKnown RBP8.46□□□□□ -1.06
PCDH9-202ENST00000377865 FAM46CQ5VWP2 391 aa8.46□□□□□ -1.06
PCDH9-202ENST00000377865 BRAT1Q6PJG6 821 aa8.46□□□□□ -1.06
PCDH9-202ENST00000377865 PEG10Q86TG7 708 aaKnown RBP8.46□□□□□ -1.06
PCDH9-202ENST00000377865 JAZF1Q86VZ6 243 aa8.46□□□□□ -1.06
PCDH9-202ENST00000377865 GID4Q8IVV7 300 aa8.46□□□□□ -1.06
PCDH9-202ENST00000377865 Q8N402 240 aa8.46□□□□□ -1.06
PCDH9-202ENST00000377865 PARP16Q8N5Y8 322 aa8.46□□□□□ -1.06
PCDH9-202ENST00000377865 OR2AP1Q8NGE2 309 aa8.46□□□□□ -1.06
PCDH9-202ENST00000377865 OR4C6Q8NH72 309 aa8.46□□□□□ -1.06
PCDH9-202ENST00000377865 RGMAQ96B86 450 aa8.46□□□□□ -1.06
PCDH9-202ENST00000377865 ACTR6Q9GZN1 396 aa8.46□□□□□ -1.06
PCDH9-202ENST00000377865 ENAMQ9NRM1 1142 aa8.46□□□□□ -1.06
PCDH9-202ENST00000377865 NFKBIL1Q9UBC1 381 aaPredicted RBP8.46□□□□□ -1.06
PCDH9-202ENST00000377865 CLEC4AQ9UMR7 237 aa8.46□□□□□ -1.06
PCDH9-202ENST00000377865 MAGED1Q9Y5V3 778 aaPredicted RBP8.46□□□□□ -1.06
PCDH9-202ENST00000377865 ARFGEF1Q9Y6D6 1849 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 SHANK3Q9BYB0 1731 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 NDUFB5O43674 189 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 SELPP16109 830 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 LCN1P31025 176 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 CA5AP35218 305 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 CCR8P51685 355 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 KCNQ1P51787 676 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 NKX2-5P52952 324 aaPredicted RBP8.45□□□□□ -1.06
PCDH9-202ENST00000377865 MAZP56270 477 aaKnown RBP8.45□□□□□ -1.06
PCDH9-202ENST00000377865 ST3GAL3Q11203 375 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 AGTRAPQ6RW13 159 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 ASB18Q6ZVZ8 466 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 CHPFQ8IZ52 775 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 ADAMTS16Q8TE57 1224 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 WACQ9BTA9 647 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 NDC1Q9BTX1 674 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 RNF121Q9H920 327 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 VAPAQ9P0L0 249 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 HCN2Q9UL51 889 aa8.45□□□□□ -1.06
PCDH9-202ENST00000377865 A0A0D9SEW6 157 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms