RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 PLD2O14939 933 aa20.23■□□□□ 0.83
CBWD3-202ENST00000377342 BSGP35613 385 aa20.23■□□□□ 0.83
CBWD3-202ENST00000377342 PLA2G16P53816 162 aa20.23■□□□□ 0.83
CBWD3-202ENST00000377342 EMP3P54852 163 aa20.23■□□□□ 0.83
CBWD3-202ENST00000377342 GALNTL6Q49A17 601 aa20.23■□□□□ 0.83
CBWD3-202ENST00000377342 RFTN2Q52LD8 501 aaPredicted RBP20.23■□□□□ 0.83
CBWD3-202ENST00000377342 C3orf38Q5JPI3 329 aa20.23■□□□□ 0.83
CBWD3-202ENST00000377342 SPDYAQ5MJ70 313 aa20.23■□□□□ 0.83
CBWD3-202ENST00000377342 C6orf136Q5SQH8 315 aa20.23■□□□□ 0.83
CBWD3-202ENST00000377342 TLDC1Q6P9B6 456 aa20.23■□□□□ 0.83
CBWD3-202ENST00000377342 COMMD6Q7Z4G1 85 aa20.23■□□□□ 0.83
CBWD3-202ENST00000377342 ZFAND4Q86XD8 727 aa20.23■□□□□ 0.83
CBWD3-202ENST00000377342 PDSS2Q86YH6 399 aa20.23■□□□□ 0.83
CBWD3-202ENST00000377342 AMER3Q8N944 861 aa20.23■□□□□ 0.83
CBWD3-202ENST00000377342 CHTF18Q8WVB6 975 aa20.23■□□□□ 0.83
CBWD3-202ENST00000377342 FCRL1Q96LA6 429 aa20.23■□□□□ 0.83
CBWD3-202ENST00000377342 QRFPRQ96P65 431 aa20.23■□□□□ 0.83
CBWD3-202ENST00000377342 ELAC2Q9BQ52 826 aaKnown RBP20.23■□□□□ 0.83
CBWD3-202ENST00000377342 PFDN4Q9NQP4 134 aa20.23■□□□□ 0.83
CBWD3-202ENST00000377342 C1orf109Q9NX04 203 aa20.23■□□□□ 0.83
CBWD3-202ENST00000377342 PISDQ9UG56 409 aa20.23■□□□□ 0.83
CBWD3-202ENST00000377342 SLC22A7Q9Y694 548 aa20.23■□□□□ 0.83
CBWD3-202ENST00000377342 POLR1CO15160 346 aaPredicted RBP20.22■□□□□ 0.83
CBWD3-202ENST00000377342 ZNF749O43361 778 aa20.22■□□□□ 0.83
CBWD3-202ENST00000377342 PEX11AO75192 247 aa20.22■□□□□ 0.83
CBWD3-202ENST00000377342 IL1RNP18510 177 aa20.22■□□□□ 0.83
CBWD3-202ENST00000377342 RAP1GDS1P52306 607 aa20.22■□□□□ 0.83
CBWD3-202ENST00000377342 RPL38P63173 70 aaKnown RBP20.22■□□□□ 0.83
CBWD3-202ENST00000377342 RAE1P78406 368 aaKnown RBP20.22■□□□□ 0.83
CBWD3-202ENST00000377342 AP5B1Q2VPB7 878 aa20.22■□□□□ 0.83
CBWD3-202ENST00000377342 ATP6AP1LQ52LC2 224 aa20.22■□□□□ 0.83
CBWD3-202ENST00000377342 GARNL3Q5VVW2 1013 aa20.22■□□□□ 0.83
CBWD3-202ENST00000377342 TRIM40Q6P9F5 258 aa20.22■□□□□ 0.83
CBWD3-202ENST00000377342 SPATA21Q7Z572 469 aa20.22■□□□□ 0.83
CBWD3-202ENST00000377342 CPLX4Q7Z7G2 160 aa20.22■□□□□ 0.83
CBWD3-202ENST00000377342 GALNT15Q8N3T1 639 aa20.22■□□□□ 0.83
CBWD3-202ENST00000377342 TTC29Q8NA56 475 aaPredicted RBP20.22■□□□□ 0.83
CBWD3-202ENST00000377342 WDR36Q8NI36 951 aaKnown RBP20.22■□□□□ 0.83
CBWD3-202ENST00000377342 ACTRT2Q8TDY3 377 aa20.22■□□□□ 0.83
CBWD3-202ENST00000377342 PPP3R2Q96LZ3 170 aa20.22■□□□□ 0.83
CBWD3-202ENST00000377342 PRDM7Q9NQW5 492 aa20.22■□□□□ 0.83
CBWD3-202ENST00000377342 CUTCQ9NTM9 273 aa20.22■□□□□ 0.83
CBWD3-202ENST00000377342 SLC39A1Q9NY26 324 aa20.22■□□□□ 0.83
CBWD3-202ENST00000377342 SDK2Q58EX2 2172 aa20.22■□□□□ 0.83
CBWD3-202ENST00000377342 FOXS1O43638 330 aa20.22■□□□□ 0.83
CBWD3-202ENST00000377342 SNX3O60493 162 aa20.22■□□□□ 0.83
CBWD3-202ENST00000377342 EEDO75530 441 aaKnown RBP20.22■□□□□ 0.83
CBWD3-202ENST00000377342 SCELO95171 688 aa20.22■□□□□ 0.83
CBWD3-202ENST00000377342 ALOX12P18054 663 aa20.22■□□□□ 0.83
CBWD3-202ENST00000377342 LSM12Q3MHD2 195 aaKnown RBP20.22■□□□□ 0.83
CBWD3-202ENST00000377342 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.22■□□□□ 0.83
CBWD3-202ENST00000377342 DEFB134Q4QY38 66 aa20.22■□□□□ 0.83
CBWD3-202ENST00000377342 SPIN4Q56A73 249 aa20.22■□□□□ 0.83
CBWD3-202ENST00000377342 CYB5D1Q6P9G0 228 aa20.22■□□□□ 0.83
CBWD3-202ENST00000377342 ABHD13Q7L211 337 aa20.22■□□□□ 0.83
CBWD3-202ENST00000377342 BPHLQ86WA6 291 aaPredicted RBP20.22■□□□□ 0.83
CBWD3-202ENST00000377342 SLC38A9Q8NBW4 561 aa20.22■□□□□ 0.83
CBWD3-202ENST00000377342 RGMAQ96B86 450 aa20.22■□□□□ 0.83
CBWD3-202ENST00000377342 KCNC2Q96PR1 638 aa20.22■□□□□ 0.83
CBWD3-202ENST00000377342 CCT8L2Q96SF2 557 aa20.22■□□□□ 0.83
CBWD3-202ENST00000377342 TCF7L2Q9NQB0 619 aa20.22■□□□□ 0.83
CBWD3-202ENST00000377342 NMRK1Q9NWW6 199 aa20.22■□□□□ 0.83
CBWD3-202ENST00000377342 DHCR7Q9UBM7 475 aaKnown RBP20.22■□□□□ 0.83
CBWD3-202ENST00000377342 URADA6NGE7 173 aa20.21■□□□□ 0.83
CBWD3-202ENST00000377342 VPS4BO75351 444 aa20.21■□□□□ 0.83
CBWD3-202ENST00000377342 SCRG1O75711 98 aa20.21■□□□□ 0.83
CBWD3-202ENST00000377342 KLHL18O94889 574 aa20.21■□□□□ 0.83
CBWD3-202ENST00000377342 FAM107AO95990 144 aa20.21■□□□□ 0.83
CBWD3-202ENST00000377342 JMJD7P0C870 316 aa20.21■□□□□ 0.83
CBWD3-202ENST00000377342 ZNF28P17035 718 aa20.21■□□□□ 0.83
CBWD3-202ENST00000377342 ARFIP1P53367 373 aa20.21■□□□□ 0.83
CBWD3-202ENST00000377342 MAPK10P53779 464 aa20.21■□□□□ 0.83
CBWD3-202ENST00000377342 ACSM2AQ08AH3 577 aa20.21■□□□□ 0.83
CBWD3-202ENST00000377342 MUM1Q2TAK8 710 aa20.21■□□□□ 0.83
CBWD3-202ENST00000377342 ACSM2BQ68CK6 577 aa20.21■□□□□ 0.83
CBWD3-202ENST00000377342 OGFOD2Q6N063 350 aa20.21■□□□□ 0.83
CBWD3-202ENST00000377342 GALNT18Q6P9A2 607 aa20.21■□□□□ 0.83
CBWD3-202ENST00000377342 TMEM126BQ8IUX1 230 aa20.21■□□□□ 0.83
CBWD3-202ENST00000377342 CENPKQ9BS16 269 aa20.21■□□□□ 0.83
CBWD3-202ENST00000377342 C1orf50Q9BV19 199 aa20.21■□□□□ 0.83
CBWD3-202ENST00000377342 SIRT5Q9NXA8 310 aa20.21■□□□□ 0.83
CBWD3-202ENST00000377342 DLGAP4Q9Y2H0 992 aa20.21■□□□□ 0.83
CBWD3-202ENST00000377342 PCDHB3Q9Y5E6 796 aa20.21■□□□□ 0.83
CBWD3-202ENST00000377342 B3GALT1Q9Y5Z6 326 aa20.21■□□□□ 0.83
CBWD3-202ENST00000377342 A0A0A6YYD5 115 aa20.2■□□□□ 0.82
CBWD3-202ENST00000377342 GALR3O60755 368 aaPredicted RBP20.2■□□□□ 0.82
CBWD3-202ENST00000377342 SEC22BO75396 215 aa20.2■□□□□ 0.82
CBWD3-202ENST00000377342 GBAP04062 536 aa20.2■□□□□ 0.82
CBWD3-202ENST00000377342 ALDOCP09972 364 aaKnown RBP20.2■□□□□ 0.82
CBWD3-202ENST00000377342 ITGAXP20702 1163 aa20.2■□□□□ 0.82
CBWD3-202ENST00000377342 CERS1P27544 350 aa20.2■□□□□ 0.82
CBWD3-202ENST00000377342 TPP2P29144 1249 aaPredicted RBP20.2■□□□□ 0.82
CBWD3-202ENST00000377342 TIA1P31483 386 aaKnown RBP eCLIP20.2■□□□□ 0.82
CBWD3-202ENST00000377342 SSR2P43308 183 aa20.2■□□□□ 0.82
CBWD3-202ENST00000377342 RAB15P59190 212 aa20.2■□□□□ 0.82
CBWD3-202ENST00000377342 FAM53BQ14153 422 aa20.2■□□□□ 0.82
CBWD3-202ENST00000377342 HERC3Q15034 1050 aa20.2■□□□□ 0.82
CBWD3-202ENST00000377342 TMEM198Q66K66 360 aa20.2■□□□□ 0.82
CBWD3-202ENST00000377342 OR4C11Q6IEV9 310 aa20.2■□□□□ 0.82
CBWD3-202ENST00000377342 TTLL10Q6ZVT0 673 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms