RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 MPC1LP0DKB6 136 aa13.15□□□□□ -0.3
GPC6-201ENST00000377047 C1GALT1C1LP0DN25 315 aa13.15□□□□□ -0.3
GPC6-201ENST00000377047 FECHP22830 423 aa13.15□□□□□ -0.3
GPC6-201ENST00000377047 GABRA3P34903 492 aa13.15□□□□□ -0.3
GPC6-201ENST00000377047 OR4D2P58180 307 aa13.15□□□□□ -0.3
GPC6-201ENST00000377047 DAG1Q14118 895 aa13.15□□□□□ -0.3
GPC6-201ENST00000377047 COMMD3Q9UBI1 195 aa13.15□□□□□ -0.3
GPC6-201ENST00000377047 OARD1Q9Y530 152 aa13.15□□□□□ -0.3
GPC6-201ENST00000377047 AQP12BA6NM10 295 aa13.15□□□□□ -0.3
GPC6-201ENST00000377047 LATS1O95835 1130 aa13.15□□□□□ -0.3
GPC6-201ENST00000377047 EMX2Q04743 252 aa13.15□□□□□ -0.3
GPC6-201ENST00000377047 COL9A2Q14055 689 aaPredicted RBP13.15□□□□□ -0.3
GPC6-201ENST00000377047 ODF4Q2M2E3 257 aa13.15□□□□□ -0.3
GPC6-201ENST00000377047 LIPJQ5W064 366 aa13.15□□□□□ -0.3
GPC6-201ENST00000377047 OR2T5Q6IEZ7 315 aa13.15□□□□□ -0.3
GPC6-201ENST00000377047 ZNF572Q7Z3I7 529 aaPredicted RBP13.15□□□□□ -0.3
GPC6-201ENST00000377047 AQP12AQ8IXF9 295 aa13.15□□□□□ -0.3
GPC6-201ENST00000377047 OR2T29Q8NH02 315 aa13.15□□□□□ -0.3
GPC6-201ENST00000377047 HSH2DQ96JZ2 352 aa13.15□□□□□ -0.3
GPC6-201ENST00000377047 MAFKO60675 156 aa13.15□□□□□ -0.3
GPC6-201ENST00000377047 CSN2P05814 226 aa13.15□□□□□ -0.3
GPC6-201ENST00000377047 ECHS1P30084 290 aa13.15□□□□□ -0.3
GPC6-201ENST00000377047 HNRNPKP61978 463 aaKnown RBP eCLIP13.15□□□□□ -0.3
GPC6-201ENST00000377047 SLAMF1Q13291 335 aa13.15□□□□□ -0.3
GPC6-201ENST00000377047 ZNF630Q2M218 657 aaPredicted RBP13.15□□□□□ -0.3
GPC6-201ENST00000377047 GPALPP1Q8IXQ4 340 aa13.15□□□□□ -0.3
GPC6-201ENST00000377047 PYURFQ96I23 114 aa13.15□□□□□ -0.3
GPC6-201ENST00000377047 TMEM74Q96NL1 305 aa13.15□□□□□ -0.3
GPC6-201ENST00000377047 GIMAP2Q9UG22 337 aa13.15□□□□□ -0.3
GPC6-201ENST00000377047 PRSS51A0A1B0GVH4 220 aa13.15□□□□□ -0.31
GPC6-201ENST00000377047 J3QLW9 94 aa13.15□□□□□ -0.31
GPC6-201ENST00000377047 DIRAS1O95057 198 aa13.15□□□□□ -0.31
GPC6-201ENST00000377047 ZNF19P17023 458 aa13.15□□□□□ -0.31
GPC6-201ENST00000377047 KCNC1P48547 511 aa13.15□□□□□ -0.31
GPC6-201ENST00000377047 PDCD4Q53EL6 469 aaKnown RBP13.15□□□□□ -0.31
GPC6-201ENST00000377047 CSNK1A1LQ8N752 337 aa13.15□□□□□ -0.31
GPC6-201ENST00000377047 OR9I1Q8NGQ6 314 aa13.15□□□□□ -0.31
GPC6-201ENST00000377047 TM9SF2Q99805 663 aa13.15□□□□□ -0.31
GPC6-201ENST00000377047 ZNF99A8MXY4 864 aaPredicted RBP13.14□□□□□ -0.31
GPC6-201ENST00000377047 ZNF487B1APH4 448 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 OAZ2O95190 189 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 GSTT2BP0CG30 244 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 CASP6P55212 293 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 PITPNAQ00169 270 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 DEFB134Q4QY38 66 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 CRTC1Q6UUV9 634 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 TMEM130Q8N3G9 435 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 ZDHHC1Q8WTX9 485 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 DNAJA4Q8WW22 397 aaPredicted RBP13.14□□□□□ -0.31
GPC6-201ENST00000377047 TMBIM1Q969X1 311 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 RHCGQ9UBD6 479 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 DOT1LQ8TEK3 1739 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 PTGESO14684 152 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 HCRTR2O43614 444 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 CDC40O60508 579 aaKnown RBP eCLIP13.14□□□□□ -0.31
GPC6-201ENST00000377047 IFI30P13284 250 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 TBPL1P62380 186 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 TIGD6Q17RP2 521 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 FIP1L1Q6UN15 594 aaKnown RBP13.14□□□□□ -0.31
GPC6-201ENST00000377047 IGDCC3Q8IVU1 814 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 ASB9Q96DX5 294 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 EBF2Q9HAK2 575 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 C14orf105Q9NVL8 296 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 PSAT1Q9Y617 370 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 SLC16A5O15375 505 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 THEGLP0DJG4 465 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 SLC3A1Q07837 685 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 TMEM225Q6GV28 225 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 FRMD7Q6ZUT3 714 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 AKAP14Q86UN6 197 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 LINC00471Q8N535 108 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 FCRL3Q96P31 734 aaPredicted RBP13.14□□□□□ -0.31
GPC6-201ENST00000377047 KAT8Q9H7Z6 458 aaKnown RBP13.14□□□□□ -0.31
GPC6-201ENST00000377047 LMAN1LQ9HAT1 526 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 GNG8Q9UK08 70 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 A0A1W2PRQ8 180 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 PDYNP01213 254 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 ITGA5P08648 1049 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 PCLAFQ15004 111 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 NNATQ16517 81 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 RBM48Q5RL73 367 aaKnown RBP13.14□□□□□ -0.31
GPC6-201ENST00000377047 EPGNQ6UW88 154 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 TTC9BQ8N6N2 239 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 DNAJA3Q96EY1 480 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 ALPK1Q96QP1 1244 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 SLC17A9Q9BYT1 436 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 PLCL2Q9UPR0 1127 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 CHD2O14647 1828 aaKnown RBP13.14□□□□□ -0.31
GPC6-201ENST00000377047 UQCRC2P22695 453 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 HRH2P25021 359 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 RPS15P62841 145 aaKnown RBP13.14□□□□□ -0.31
GPC6-201ENST00000377047 PPP1R8Q12972 351 aaKnown RBP13.14□□□□□ -0.31
GPC6-201ENST00000377047 PON3Q15166 354 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 ARL9Q6T311 187 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 RNF111Q6ZNA4 994 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 DGLUCYQ7Z3D6 616 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 RAB43Q86YS6 212 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 SDR16C5Q8N3Y7 309 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 RPLP0P6Q8NHW5 317 aa13.14□□□□□ -0.31
GPC6-201ENST00000377047 CANT1Q8WVQ1 401 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms