RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 BCKDKO14874 412 aa19.36■□□□□ 0.69
VSX1-202ENST00000376709 LAMP2P13473 410 aa19.36■□□□□ 0.69
VSX1-202ENST00000376709 ETFAP13804 333 aa19.36■□□□□ 0.69
VSX1-202ENST00000376709 FPR1P21462 350 aa19.36■□□□□ 0.69
VSX1-202ENST00000376709 SEC13P55735 322 aa19.36■□□□□ 0.69
VSX1-202ENST00000376709 ZC3H12BQ5HYM0 836 aaKnown RBP19.36■□□□□ 0.69
VSX1-202ENST00000376709 COX20Q5RI15 118 aa19.36■□□□□ 0.69
VSX1-202ENST00000376709 C6orf141Q5SZD1 244 aa19.36■□□□□ 0.69
VSX1-202ENST00000376709 DUS1LQ6P1R4 473 aaKnown RBP19.36■□□□□ 0.69
VSX1-202ENST00000376709 CHDHQ8NE62 594 aaPredicted RBP19.36■□□□□ 0.69
VSX1-202ENST00000376709 GANCQ8TET4 914 aa19.36■□□□□ 0.69
VSX1-202ENST00000376709 REEP1Q9H902 201 aa19.36■□□□□ 0.69
VSX1-202ENST00000376709 CUEDC1Q9NWM3 386 aaPredicted RBP19.36■□□□□ 0.69
VSX1-202ENST00000376709 BLOC1S6Q9UL45 172 aa19.36■□□□□ 0.69
VSX1-202ENST00000376709 CKAP5Q14008 2032 aa19.36■□□□□ 0.69
VSX1-202ENST00000376709 MITFO75030 526 aaPredicted RBP19.35■□□□□ 0.69
VSX1-202ENST00000376709 KLHL18O94889 574 aa19.35■□□□□ 0.69
VSX1-202ENST00000376709 ACP5P13686 325 aa19.35■□□□□ 0.69
VSX1-202ENST00000376709 CXCR2P25025 360 aa19.35■□□□□ 0.69
VSX1-202ENST00000376709 PSMB5P28074 263 aa19.35■□□□□ 0.69
VSX1-202ENST00000376709 CHI3L1P36222 383 aaPredicted RBP19.35■□□□□ 0.69
VSX1-202ENST00000376709 POLR2IP36954 125 aaKnown RBP19.35■□□□□ 0.69
VSX1-202ENST00000376709 CRYBA2P53672 197 aa19.35■□□□□ 0.69
VSX1-202ENST00000376709 CD47Q08722 323 aa19.35■□□□□ 0.69
VSX1-202ENST00000376709 MPEG1Q2M385 716 aa19.35■□□□□ 0.69
VSX1-202ENST00000376709 ZNF691Q5VV52 312 aa19.35■□□□□ 0.69
VSX1-202ENST00000376709 IKBIPQ70UQ0 350 aa19.35■□□□□ 0.69
VSX1-202ENST00000376709 SLC9B2Q86UD5 537 aa19.35■□□□□ 0.69
VSX1-202ENST00000376709 CYP4Z1Q86W10 505 aa19.35■□□□□ 0.69
VSX1-202ENST00000376709 PIK3C3Q8NEB9 887 aa19.35■□□□□ 0.69
VSX1-202ENST00000376709 SMPDL3AQ92484 453 aa19.35■□□□□ 0.69
VSX1-202ENST00000376709 OCEL1Q9H607 264 aa19.35■□□□□ 0.69
VSX1-202ENST00000376709 PELI2Q9HAT8 420 aa19.35■□□□□ 0.69
VSX1-202ENST00000376709 GPATCH2Q9NW75 528 aa19.35■□□□□ 0.69
VSX1-202ENST00000376709 TAS2R9Q9NYW1 312 aa19.35■□□□□ 0.69
VSX1-202ENST00000376709 PDP1Q9P0J1 537 aaPredicted RBP19.35■□□□□ 0.69
VSX1-202ENST00000376709 CLEC1BQ9P126 229 aa19.35■□□□□ 0.69
VSX1-202ENST00000376709 KIF17Q9P2E2 1029 aa19.35■□□□□ 0.69
VSX1-202ENST00000376709 ACSL6Q9UKU0 697 aa19.35■□□□□ 0.69
VSX1-202ENST00000376709 HEMK1Q9Y5R4 338 aaPredicted RBP19.35■□□□□ 0.69
VSX1-202ENST00000376709 GPR89AB7ZAQ6 455 aa19.34■□□□□ 0.69
VSX1-202ENST00000376709 ZNF701M0R085 212 aaPredicted RBP19.34■□□□□ 0.69
VSX1-202ENST00000376709 SLC16A6O15403 523 aa19.34■□□□□ 0.69
VSX1-202ENST00000376709 GPR89BP0CG08 455 aa19.34■□□□□ 0.69
VSX1-202ENST00000376709 TIE1P35590 1138 aa19.34■□□□□ 0.69
VSX1-202ENST00000376709 PRIM2P49643 509 aa19.34■□□□□ 0.69
VSX1-202ENST00000376709 CCR8P51685 355 aa19.34■□□□□ 0.69
VSX1-202ENST00000376709 MVDP53602 400 aa19.34■□□□□ 0.69
VSX1-202ENST00000376709 ITGA1P56199 1179 aa19.34■□□□□ 0.69
VSX1-202ENST00000376709 DLX2Q07687 328 aaPredicted RBP19.34■□□□□ 0.69
VSX1-202ENST00000376709 ENPP2Q13822 863 aa19.34■□□□□ 0.69
VSX1-202ENST00000376709 CTU2Q2VPK5 515 aaKnown RBP19.34■□□□□ 0.69
VSX1-202ENST00000376709 PIWIL3Q7Z3Z3 882 aaKnown RBP19.34■□□□□ 0.69
VSX1-202ENST00000376709 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.34■□□□□ 0.69
VSX1-202ENST00000376709 OR52N2Q8NGI0 321 aa19.34■□□□□ 0.69
VSX1-202ENST00000376709 OR5AK3PQ8NH89 298 aa19.34■□□□□ 0.69
VSX1-202ENST00000376709 TRMT61BQ9BVS5 477 aaKnown RBP19.34■□□□□ 0.69
VSX1-202ENST00000376709 PCBD2Q9H0N5 130 aa19.34■□□□□ 0.69
VSX1-202ENST00000376709 RIBC2Q9H4K1 309 aa19.34■□□□□ 0.69
VSX1-202ENST00000376709 PHPT1Q9NRX4 125 aaPredicted RBP19.34■□□□□ 0.69
VSX1-202ENST00000376709 ACSL5Q9ULC5 683 aa19.34■□□□□ 0.69
VSX1-202ENST00000376709 AP1M2Q9Y6Q5 423 aa19.34■□□□□ 0.69
VSX1-202ENST00000376709 A0A1W2PRB8 838 aa19.34■□□□□ 0.69
VSX1-202ENST00000376709 PLPP1O14494 284 aa19.34■□□□□ 0.69
VSX1-202ENST00000376709 ITGAMP11215 1152 aa19.34■□□□□ 0.69
VSX1-202ENST00000376709 TPP2P29144 1249 aaPredicted RBP19.34■□□□□ 0.69
VSX1-202ENST00000376709 SOAT1P35610 550 aa19.34■□□□□ 0.69
VSX1-202ENST00000376709 DAPP51397 102 aa19.34■□□□□ 0.69
VSX1-202ENST00000376709 IL18R1Q13478 541 aa19.34■□□□□ 0.69
VSX1-202ENST00000376709 AGERQ15109 404 aa19.34■□□□□ 0.69
VSX1-202ENST00000376709 GCNT6Q5T4J0 391 aa19.34■□□□□ 0.69
VSX1-202ENST00000376709 GPR107Q5VW38 600 aa19.34■□□□□ 0.69
VSX1-202ENST00000376709 KHDRBS2Q5VWX1 349 aaKnown RBP19.34■□□□□ 0.69
VSX1-202ENST00000376709 AP1ARQ63HQ0 302 aa19.34■□□□□ 0.69
VSX1-202ENST00000376709 TRIM40Q6P9F5 258 aa19.34■□□□□ 0.69
VSX1-202ENST00000376709 RAB42Q8N4Z0 105 aa19.34■□□□□ 0.69
VSX1-202ENST00000376709 C12orf43Q96C57 262 aaKnown RBP19.34■□□□□ 0.69
VSX1-202ENST00000376709 DOHHQ9BU89 302 aa19.34■□□□□ 0.69
VSX1-202ENST00000376709 SLC6A16Q9GZN6 736 aa19.34■□□□□ 0.69
VSX1-202ENST00000376709 RUBCNLQ9H714 662 aa19.34■□□□□ 0.69
VSX1-202ENST00000376709 ZFR2Q9UPR6 939 aaKnown RBP19.34■□□□□ 0.69
VSX1-202ENST00000376709 KLHL33A6NCF5 533 aa19.33■□□□□ 0.69
VSX1-202ENST00000376709 H7BY64 318 aa19.33■□□□□ 0.69
VSX1-202ENST00000376709 ABCB7O75027 752 aa19.33■□□□□ 0.69
VSX1-202ENST00000376709 UGT2B11O75310 529 aa19.33■□□□□ 0.69
VSX1-202ENST00000376709 CYP4B1P13584 511 aa19.33■□□□□ 0.69
VSX1-202ENST00000376709 TRIM23P36406 574 aa19.33■□□□□ 0.69
VSX1-202ENST00000376709 ISL1P61371 349 aa19.33■□□□□ 0.69
VSX1-202ENST00000376709 KCNJ10P78508 379 aa19.33■□□□□ 0.69
VSX1-202ENST00000376709 IL5RAQ01344 420 aa19.33■□□□□ 0.69
VSX1-202ENST00000376709 SGCGQ13326 291 aa19.33■□□□□ 0.69
VSX1-202ENST00000376709 SKIV2LQ15477 1246 aaKnown RBP19.33■□□□□ 0.69
VSX1-202ENST00000376709 ZNF776Q68DI1 518 aaPredicted RBP19.33■□□□□ 0.69
VSX1-202ENST00000376709 KDM4DQ6B0I6 523 aa19.33■□□□□ 0.69
VSX1-202ENST00000376709 EP400NLQ6ZTU2 488 aa19.33■□□□□ 0.69
VSX1-202ENST00000376709 MMP21Q8N119 569 aa19.33■□□□□ 0.69
VSX1-202ENST00000376709 ANKRD53Q8N9V6 530 aa19.33■□□□□ 0.69
VSX1-202ENST00000376709 C12orf66Q96MD2 445 aa19.33■□□□□ 0.69
VSX1-202ENST00000376709 PRAP1Q96NZ9 151 aa19.33■□□□□ 0.69
VSX1-202ENST00000376709 FERD3LQ96RJ6 166 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms