RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 CYP4Z1Q86W10 505 aa11.22□□□□□ -0.61
DDR1-227ENST00000376570 KRT78Q8N1N4 520 aa11.22□□□□□ -0.61
DDR1-227ENST00000376570 LCN9Q8WX39 176 aa11.22□□□□□ -0.61
DDR1-227ENST00000376570 RAD51AP1Q96B01 352 aa11.22□□□□□ -0.61
DDR1-227ENST00000376570 COG8Q96MW5 612 aa11.22□□□□□ -0.61
DDR1-227ENST00000376570 LRRC3BQ96PB8 259 aa11.22□□□□□ -0.61
DDR1-227ENST00000376570 RBM4BQ9BQ04 359 aaKnown RBP11.22□□□□□ -0.61
DDR1-227ENST00000376570 RBM4Q9BWF3 364 aaKnown RBP11.22□□□□□ -0.61
DDR1-227ENST00000376570 P2RY12Q9H244 342 aa11.22□□□□□ -0.61
DDR1-227ENST00000376570 AGPAT4Q9NRZ5 378 aa11.22□□□□□ -0.61
DDR1-227ENST00000376570 CHD7Q9P2D1 2997 aa11.22□□□□□ -0.61
DDR1-227ENST00000376570 TRBC2A0A5B9 178 aa11.22□□□□□ -0.61
DDR1-227ENST00000376570 SH3PXD2BA1X283 911 aa11.22□□□□□ -0.61
DDR1-227ENST00000376570 LRRC72A6NJI9 287 aa11.22□□□□□ -0.61
DDR1-227ENST00000376570 TBX1O43435 398 aa11.22□□□□□ -0.61
DDR1-227ENST00000376570 KAT7O95251 611 aa11.22□□□□□ -0.61
DDR1-227ENST00000376570 PRPS2P11908 318 aa11.22□□□□□ -0.61
DDR1-227ENST00000376570 SERPINB10P48595 397 aa11.22□□□□□ -0.61
DDR1-227ENST00000376570 CENPAP49450 140 aa11.22□□□□□ -0.61
DDR1-227ENST00000376570 TJAP1Q5JTD0 557 aa11.22□□□□□ -0.61
DDR1-227ENST00000376570 GCNT6Q5T4J0 391 aa11.22□□□□□ -0.61
DDR1-227ENST00000376570 ARMCX6Q7L4S7 300 aa11.22□□□□□ -0.61
DDR1-227ENST00000376570 NPAS3Q8IXF0 933 aa11.22□□□□□ -0.61
DDR1-227ENST00000376570 ZFP41Q8N8Y5 198 aa11.22□□□□□ -0.61
DDR1-227ENST00000376570 ASB11Q8WXH4 323 aa11.22□□□□□ -0.61
DDR1-227ENST00000376570 ARRDC3Q96B67 414 aa11.22□□□□□ -0.61
DDR1-227ENST00000376570 ZHX1-C8orf76Q96EF9 292 aa11.22□□□□□ -0.61
DDR1-227ENST00000376570 FEVQ99581 238 aa11.22□□□□□ -0.61
DDR1-227ENST00000376570 ACTL8Q9H568 366 aa11.22□□□□□ -0.61
DDR1-227ENST00000376570 EHD3Q9NZN3 535 aa11.22□□□□□ -0.61
DDR1-227ENST00000376570 RPS6KA6Q9UK32 745 aa11.22□□□□□ -0.61
DDR1-227ENST00000376570 SAMD4AQ9UPU9 718 aaKnown RBP11.22□□□□□ -0.61
DDR1-227ENST00000376570 FAM92AA1XBS5 289 aa11.21□□□□□ -0.61
DDR1-227ENST00000376570 IMPDH2P12268 514 aa11.21□□□□□ -0.61
DDR1-227ENST00000376570 DCTP40126 519 aa11.21□□□□□ -0.61
DDR1-227ENST00000376570 NCBP2P52298 156 aaKnown RBP eCLIP11.21□□□□□ -0.61
DDR1-227ENST00000376570 SLC13A2Q13183 592 aa11.21□□□□□ -0.61
DDR1-227ENST00000376570 EIF4EBP2Q13542 120 aaPredicted RBP11.21□□□□□ -0.61
DDR1-227ENST00000376570 KLHL12Q53G59 568 aa11.21□□□□□ -0.61
DDR1-227ENST00000376570 SOWAHCQ53LP3 525 aaPredicted RBP11.21□□□□□ -0.61
DDR1-227ENST00000376570 IQCHQ86VS3 1027 aa11.21□□□□□ -0.61
DDR1-227ENST00000376570 CHERPQ8IWX8 916 aaKnown RBP11.21□□□□□ -0.61
DDR1-227ENST00000376570 POPDC3Q9HBV1 291 aa11.21□□□□□ -0.61
DDR1-227ENST00000376570 HMG20AQ9NP66 347 aa11.21□□□□□ -0.61
DDR1-227ENST00000376570 A0A096LPI6 279 aa11.21□□□□□ -0.61
DDR1-227ENST00000376570 A8MV72 311 aaPredicted RBP11.21□□□□□ -0.61
DDR1-227ENST00000376570 ARHGEF15O94989 841 aa11.21□□□□□ -0.61
DDR1-227ENST00000376570 SCELO95171 688 aa11.21□□□□□ -0.61
DDR1-227ENST00000376570 FCER2P06734 321 aa11.21□□□□□ -0.61
DDR1-227ENST00000376570 OR12D1P0DN82 309 aa11.21□□□□□ -0.61
DDR1-227ENST00000376570 ADRB3P13945 408 aa11.21□□□□□ -0.61
DDR1-227ENST00000376570 C21orf33P30042 268 aaPredicted RBP11.21□□□□□ -0.61
DDR1-227ENST00000376570 INPP1P49441 399 aa11.21□□□□□ -0.61
DDR1-227ENST00000376570 ALDH3A2P51648 485 aa11.21□□□□□ -0.61
DDR1-227ENST00000376570 PPIGQ13427 754 aaKnown RBP eCLIP11.21□□□□□ -0.612e-6■■■□□ 16.6
DDR1-227ENST00000376570 DEPDC1Q5TB30 811 aa11.21□□□□□ -0.61
DDR1-227ENST00000376570 DLEU7Q6UYE1 221 aa11.21□□□□□ -0.61
DDR1-227ENST00000376570 ADIPOR2Q86V24 386 aa11.21□□□□□ -0.61
DDR1-227ENST00000376570 GALNT13Q8IUC8 556 aa11.21□□□□□ -0.61
DDR1-227ENST00000376570 OR10G2Q8NGC3 310 aa11.21□□□□□ -0.61
DDR1-227ENST00000376570 WDR36Q8NI36 951 aaKnown RBP11.21□□□□□ -0.61
DDR1-227ENST00000376570 TFAP2CQ92754 450 aa11.21□□□□□ -0.61
DDR1-227ENST00000376570 LHPPQ9H008 270 aa11.21□□□□□ -0.61
DDR1-227ENST00000376570 RAD18Q9NS91 495 aa11.21□□□□□ -0.61
DDR1-227ENST00000376570 A0A1W2PQU0 124 aa11.21□□□□□ -0.62
DDR1-227ENST00000376570 CAPN15O75808 1086 aa11.21□□□□□ -0.62
DDR1-227ENST00000376570 MT-ND2P03891 347 aa11.21□□□□□ -0.62
DDR1-227ENST00000376570 C8BP07358 591 aa11.21□□□□□ -0.62
DDR1-227ENST00000376570 HSD17B1P14061 328 aa11.21□□□□□ -0.62
DDR1-227ENST00000376570 PVRP15151 417 aa11.21□□□□□ -0.62
DDR1-227ENST00000376570 POLR2CP19387 275 aaPredicted RBP11.21□□□□□ -0.62
DDR1-227ENST00000376570 GGT1P19440 569 aa11.21□□□□□ -0.62
DDR1-227ENST00000376570 GJA8P48165 433 aa11.21□□□□□ -0.62
DDR1-227ENST00000376570 HBA1P69905 142 aa11.21□□□□□ -0.62
DDR1-227ENST00000376570 CDK6Q00534 326 aa11.21□□□□□ -0.62
DDR1-227ENST00000376570 TARDBPQ13148 414 aaKnown RBP eCLIP11.21□□□□□ -0.62
DDR1-227ENST00000376570 VMACQ2NL98 169 aa11.21□□□□□ -0.62
DDR1-227ENST00000376570 LCN8Q6JVE9 175 aa11.21□□□□□ -0.62
DDR1-227ENST00000376570 NCCRP1Q6ZVX7 275 aaPredicted RBP11.21□□□□□ -0.62
DDR1-227ENST00000376570 C16orf62Q7Z3J2 963 aa11.21□□□□□ -0.62
DDR1-227ENST00000376570 ARMC8Q8IUR7 673 aa11.21□□□□□ -0.62
DDR1-227ENST00000376570 SLC5A11Q8WWX8 675 aa11.21□□□□□ -0.62
DDR1-227ENST00000376570 SLC12A9Q9BXP2 914 aa11.21□□□□□ -0.62
DDR1-227ENST00000376570 ZBP1Q9H171 429 aa11.21□□□□□ -0.62
DDR1-227ENST00000376570 FAM118AQ9NWS6 357 aa11.21□□□□□ -0.62
DDR1-227ENST00000376570 TBX21Q9UL17 535 aa11.21□□□□□ -0.62
DDR1-227ENST00000376570 TPRKBQ9Y3C4 175 aa11.21□□□□□ -0.62
DDR1-227ENST00000376570 SCN10AQ9Y5Y9 1956 aa11.2□□□□□ -0.62
DDR1-227ENST00000376570 TDRD15B5MCY1 1934 aaKnown RBP11.2□□□□□ -0.62
DDR1-227ENST00000376570 A8MUA0 341 aa11.2□□□□□ -0.62
DDR1-227ENST00000376570 ERN1O75460 977 aaKnown RBP11.2□□□□□ -0.62
DDR1-227ENST00000376570 IMPA1P29218 277 aa11.2□□□□□ -0.62
DDR1-227ENST00000376570 S100A5P33763 92 aa11.2□□□□□ -0.62
DDR1-227ENST00000376570 MAP4K2Q12851 820 aa11.2□□□□□ -0.62
DDR1-227ENST00000376570 PDGFRLQ15198 375 aa11.2□□□□□ -0.62
DDR1-227ENST00000376570 ATP6AP1Q15904 470 aa11.2□□□□□ -0.62
DDR1-227ENST00000376570 EIF3MQ7L2H7 374 aaKnown RBP11.2□□□□□ -0.62
DDR1-227ENST00000376570 VN1R2Q8NFZ6 395 aa11.2□□□□□ -0.62
DDR1-227ENST00000376570 OR9A1PQ8NGU1 263 aa11.2□□□□□ -0.62
DDR1-227ENST00000376570 SPPL3Q8TCT6 385 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms