RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 MLIPQ5VWP3 458 aa12.44□□□□□ -0.42
MSH5-204ENST00000375755 ZSWIM9Q86XI8 627 aa12.44□□□□□ -0.42
MSH5-204ENST00000375755 GRAMD2AQ8IUY3 354 aa12.44□□□□□ -0.42
MSH5-204ENST00000375755 CD200R1Q8TD46 325 aa12.44□□□□□ -0.42
MSH5-204ENST00000375755 UBASH3BQ8TF42 649 aa12.44□□□□□ -0.42
MSH5-204ENST00000375755 GABARAPL3Q9BY60 117 aa12.44□□□□□ -0.42
MSH5-204ENST00000375755 BARHL1Q9BZE3 327 aa12.44□□□□□ -0.42
MSH5-204ENST00000375755 NARFLQ9H6Q4 476 aa12.44□□□□□ -0.42
MSH5-204ENST00000375755 IPPKQ9H8X2 491 aa12.44□□□□□ -0.42
MSH5-204ENST00000375755 REEP1Q9H902 201 aa12.44□□□□□ -0.42
MSH5-204ENST00000375755 SARS2Q9NP81 518 aaKnown RBP12.44□□□□□ -0.42
MSH5-204ENST00000375755 TRMT6Q9UJA5 497 aaKnown RBP12.44□□□□□ -0.42
MSH5-204ENST00000375755 CEP290O15078 2479 aa12.44□□□□□ -0.42
MSH5-204ENST00000375755 M0R129 80 aa12.43□□□□□ -0.42
MSH5-204ENST00000375755 AKR7A2O43488 359 aa12.43□□□□□ -0.42
MSH5-204ENST00000375755 GPX5O75715 221 aa12.43□□□□□ -0.42
MSH5-204ENST00000375755 IFI30P13284 250 aa12.43□□□□□ -0.42
MSH5-204ENST00000375755 STK19P49842 368 aaPredicted RBP12.43□□□□□ -0.42
MSH5-204ENST00000375755 IL2P60568 153 aa12.43□□□□□ -0.42
MSH5-204ENST00000375755 HTRA4P83105 476 aaPredicted RBP12.43□□□□□ -0.42
MSH5-204ENST00000375755 FAPQ12884 760 aa12.43□□□□□ -0.42
MSH5-204ENST00000375755 PTCHD3Q3KNS1 767 aa12.43□□□□□ -0.42
MSH5-204ENST00000375755 CACHD1Q5VU97 1274 aa12.43□□□□□ -0.42
MSH5-204ENST00000375755 DOK6Q6PKX4 331 aa12.43□□□□□ -0.42
MSH5-204ENST00000375755 ATCAYQ86WG3 371 aa12.43□□□□□ -0.42
MSH5-204ENST00000375755 LAX1Q8IWV1 398 aa12.43□□□□□ -0.42
MSH5-204ENST00000375755 PIANPQ8IYJ0 282 aa12.43□□□□□ -0.42
MSH5-204ENST00000375755 CMTM8Q8IZV2 173 aa12.43□□□□□ -0.42
MSH5-204ENST00000375755 PEX13Q92968 403 aa12.43□□□□□ -0.42
MSH5-204ENST00000375755 BBS2Q9BXC9 721 aa12.43□□□□□ -0.42
MSH5-204ENST00000375755 SRRQ9GZT4 340 aa12.43□□□□□ -0.42
MSH5-204ENST00000375755 KCNH6Q9H252 994 aa12.43□□□□□ -0.42
MSH5-204ENST00000375755 ABCB8Q9NUT2 735 aa12.43□□□□□ -0.42
MSH5-204ENST00000375755 VPS4AQ9UN37 437 aa12.43□□□□□ -0.42
MSH5-204ENST00000375755 PCDHB9Q9Y5E1 797 aa12.43□□□□□ -0.42
MSH5-204ENST00000375755 BNIP3LO60238 219 aa12.43□□□□□ -0.42
MSH5-204ENST00000375755 VPS26AO75436 327 aa12.43□□□□□ -0.42
MSH5-204ENST00000375755 HOXB9P17482 250 aaPredicted RBP12.43□□□□□ -0.42
MSH5-204ENST00000375755 CD72P21854 359 aa12.43□□□□□ -0.42
MSH5-204ENST00000375755 NUDT1P36639 197 aa12.43□□□□□ -0.42
MSH5-204ENST00000375755 PRIM2P49643 509 aa12.43□□□□□ -0.42
MSH5-204ENST00000375755 ZNF140P52738 457 aaPredicted RBP12.43□□□□□ -0.42
MSH5-204ENST00000375755 PSAPL1Q6NUJ1 521 aa12.43□□□□□ -0.42
MSH5-204ENST00000375755 ADAMTSL2Q86TH1 951 aa12.43□□□□□ -0.42
MSH5-204ENST00000375755 TMEM132CQ8N3T6 1108 aa12.43□□□□□ -0.42
MSH5-204ENST00000375755 MRPS31Q92665 395 aaKnown RBP12.43□□□□□ -0.42
MSH5-204ENST00000375755 HSH2DQ96JZ2 352 aa12.43□□□□□ -0.42
MSH5-204ENST00000375755 C3orf14Q9HBI5 128 aa12.43□□□□□ -0.42
MSH5-204ENST00000375755 FKBPLQ9UIM3 349 aa12.43□□□□□ -0.42
MSH5-204ENST00000375755 CCDC182A6NF36 153 aa12.43□□□□□ -0.42
MSH5-204ENST00000375755 GRXCR1A8MXD5 290 aa12.43□□□□□ -0.42
MSH5-204ENST00000375755 B4DXG7 233 aa12.43□□□□□ -0.42
MSH5-204ENST00000375755 B8ZZF3 427 aa12.43□□□□□ -0.42
MSH5-204ENST00000375755 LEFTY2O00292 366 aa12.43□□□□□ -0.42
MSH5-204ENST00000375755 RGS14O43566 566 aa12.43□□□□□ -0.42
MSH5-204ENST00000375755 CSF2P04141 144 aa12.43□□□□□ -0.42
MSH5-204ENST00000375755 PKMP14618 531 aaKnown RBP12.43□□□□□ -0.42
MSH5-204ENST00000375755 MYL9P24844 172 aa12.43□□□□□ -0.42
MSH5-204ENST00000375755 PPM1AP35813 382 aa12.43□□□□□ -0.42
MSH5-204ENST00000375755 RPS19P39019 145 aaKnown RBP12.43□□□□□ -0.42
MSH5-204ENST00000375755 RHOAP61586 193 aa12.43□□□□□ -0.42
MSH5-204ENST00000375755 SNRPD2P62316 118 aaKnown RBP12.43□□□□□ -0.42
MSH5-204ENST00000375755 LMAN2Q12907 356 aa12.43□□□□□ -0.42
MSH5-204ENST00000375755 INO80DQ53TQ3 878 aaPredicted RBP12.43□□□□□ -0.42
MSH5-204ENST00000375755 CTSL3PQ5NE16 218 aa12.43□□□□□ -0.42
MSH5-204ENST00000375755 C19orf48Q6RUI8 117 aa12.43□□□□□ -0.42
MSH5-204ENST00000375755 PAMR1Q6UXH9 720 aa12.43□□□□□ -0.42
MSH5-204ENST00000375755 TMPRSS11AQ6ZMR5 421 aa12.43□□□□□ -0.42
MSH5-204ENST00000375755 DPY19L3Q6ZPD9 716 aa12.43□□□□□ -0.42
MSH5-204ENST00000375755 YIPF7Q8N8F6 280 aa12.43□□□□□ -0.42
MSH5-204ENST00000375755 DEDD2Q8WXF8 326 aa12.43□□□□□ -0.42
MSH5-204ENST00000375755 POP5Q969H6 163 aaKnown RBP12.43□□□□□ -0.42
MSH5-204ENST00000375755 ZNF226Q9NYT6 803 aa12.43□□□□□ -0.42
MSH5-204ENST00000375755 MAT2BQ9NZL9 334 aa12.43□□□□□ -0.42
MSH5-204ENST00000375755 ANKRD66B4E2M5 251 aa12.42□□□□□ -0.42
MSH5-204ENST00000375755 OTCP00480 354 aa12.42□□□□□ -0.42
MSH5-204ENST00000375755 C9P02748 559 aa12.42□□□□□ -0.42
MSH5-204ENST00000375755 UQCRC1P31930 480 aa12.42□□□□□ -0.42
MSH5-204ENST00000375755 CTNNB1P35222 781 aa12.42□□□□□ -0.42
MSH5-204ENST00000375755 MLLT3P42568 568 aaPredicted RBP12.42□□□□□ -0.42
MSH5-204ENST00000375755 IL12RB1P42701 662 aa12.42□□□□□ -0.42
MSH5-204ENST00000375755 IDH2P48735 452 aaKnown RBP12.42□□□□□ -0.42
MSH5-204ENST00000375755 TGM4P49221 684 aa12.42□□□□□ -0.42
MSH5-204ENST00000375755 ITGA1P56199 1179 aa12.42□□□□□ -0.42
MSH5-204ENST00000375755 HOXC5Q00444 222 aa12.42□□□□□ -0.42
MSH5-204ENST00000375755 PCBP2Q15366 365 aaKnown RBP eCLIP12.42□□□□□ -0.422e-9■■■□□ 16.3
MSH5-204ENST00000375755 TMEM240Q5SV17 173 aa12.42□□□□□ -0.42
MSH5-204ENST00000375755 ASTLQ6HA08 431 aaPredicted RBP12.42□□□□□ -0.42
MSH5-204ENST00000375755 NCEH1Q6PIU2 408 aa12.42□□□□□ -0.42
MSH5-204ENST00000375755 RDH10Q8IZV5 341 aa12.42□□□□□ -0.42
MSH5-204ENST00000375755 POF1BQ8WVV4 589 aa12.42□□□□□ -0.42
MSH5-204ENST00000375755 CNPPD1Q9BV87 410 aa12.42□□□□□ -0.42
MSH5-204ENST00000375755 SLC22A4Q9H015 551 aa12.42□□□□□ -0.42
MSH5-204ENST00000375755 C11orf54Q9H0W9 315 aaPredicted RBP12.42□□□□□ -0.42
MSH5-204ENST00000375755 GPRC5BQ9NZH0 403 aa12.42□□□□□ -0.42
MSH5-204ENST00000375755 NUDT4Q9NZJ9 180 aa12.42□□□□□ -0.42
MSH5-204ENST00000375755 SNX7Q9UNH6 387 aa12.42□□□□□ -0.42
MSH5-204ENST00000375755 EFCAB10A6NFE3 127 aa12.42□□□□□ -0.42
MSH5-204ENST00000375755 IQCF5A8MTL0 148 aa12.42□□□□□ -0.42
MSH5-204ENST00000375755 H3BM21 787 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms