RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 PBLDP30039 288 aaPredicted RBP13.97□□□□□ -0.17
MSH5-201ENST00000375703 EIF2DP41214 584 aaKnown RBP13.97□□□□□ -0.17
MSH5-201ENST00000375703 MC1RQ01726 317 aa13.97□□□□□ -0.17
MSH5-201ENST00000375703 ZNF763Q0D2J5 394 aa13.97□□□□□ -0.17
MSH5-201ENST00000375703 TMEM115Q12893 351 aaPredicted RBP13.97□□□□□ -0.17
MSH5-201ENST00000375703 TMEM220Q6QAJ8 160 aa13.97□□□□□ -0.17
MSH5-201ENST00000375703 ARMCX6Q7L4S7 300 aa13.97□□□□□ -0.17
MSH5-201ENST00000375703 SLC46A3Q7Z3Q1 461 aa13.97□□□□□ -0.17
MSH5-201ENST00000375703 ARMC8Q8IUR7 673 aa13.97□□□□□ -0.17
MSH5-201ENST00000375703 LACC1Q8IV20 430 aa13.97□□□□□ -0.17
MSH5-201ENST00000375703 DEPDC4Q8N2C3 294 aa13.97□□□□□ -0.17
MSH5-201ENST00000375703 AMER2Q8N7J2 671 aa13.97□□□□□ -0.17
MSH5-201ENST00000375703 DENND6BQ8NEG7 585 aa13.97□□□□□ -0.17
MSH5-201ENST00000375703 OR52N2Q8NGI0 321 aa13.97□□□□□ -0.17
MSH5-201ENST00000375703 GOT1L1Q8NHS2 421 aaPredicted RBP13.97□□□□□ -0.17
MSH5-201ENST00000375703 CXorf40BQ96DE9 158 aa13.97□□□□□ -0.17
MSH5-201ENST00000375703 CORO1BQ9BR76 489 aa13.97□□□□□ -0.17
MSH5-201ENST00000375703 ZNF556Q9HAH1 456 aa13.97□□□□□ -0.17
MSH5-201ENST00000375703 SACM1LQ9NTJ5 587 aa13.97□□□□□ -0.17
MSH5-201ENST00000375703 SCHIP1Q9P0W5 487 aaPredicted RBP13.97□□□□□ -0.17
MSH5-201ENST00000375703 UPK1BO75841 260 aa13.96□□□□□ -0.17
MSH5-201ENST00000375703 CTSAP10619 480 aa13.96□□□□□ -0.17
MSH5-201ENST00000375703 RBBP4Q09028 425 aa13.96□□□□□ -0.17
MSH5-201ENST00000375703 COLEC12Q5KU26 742 aa13.96□□□□□ -0.17
MSH5-201ENST00000375703 REPS1Q96D71 796 aa13.96□□□□□ -0.17
MSH5-201ENST00000375703 COL21A1Q96P44 957 aa13.96□□□□□ -0.17
MSH5-201ENST00000375703 FAM83CQ9BQN1 747 aa13.96□□□□□ -0.17
MSH5-201ENST00000375703 LOC100506127A0A0U1RQW1 187 aa13.96□□□□□ -0.18
MSH5-201ENST00000375703 ISPDA4D126 451 aa13.96□□□□□ -0.18
MSH5-201ENST00000375703 PRAMEF25A6NGN4 478 aa13.96□□□□□ -0.18
MSH5-201ENST00000375703 AGAP5A6NIR3 686 aa13.96□□□□□ -0.18
MSH5-201ENST00000375703 J3KTA2 159 aa13.96□□□□□ -0.18
MSH5-201ENST00000375703 TAF4O00268 1085 aa13.96□□□□□ -0.18
MSH5-201ENST00000375703 SAP18O00422 153 aaKnown RBP13.96□□□□□ -0.18
MSH5-201ENST00000375703 TGFB1P01137 390 aa13.96□□□□□ -0.18
MSH5-201ENST00000375703 POU2F1P14859 743 aa13.96□□□□□ -0.18
MSH5-201ENST00000375703 XPAP23025 273 aaPredicted RBP13.96□□□□□ -0.18
MSH5-201ENST00000375703 C2orf80Q0P641 193 aa13.96□□□□□ -0.18
MSH5-201ENST00000375703 ST3GAL4Q11206 333 aa13.96□□□□□ -0.18
MSH5-201ENST00000375703 FOXD4Q12950 439 aaPredicted RBP13.96□□□□□ -0.18
MSH5-201ENST00000375703 TUBA3EQ6PEY2 450 aa13.96□□□□□ -0.18
MSH5-201ENST00000375703 LYSMD2Q8IV50 215 aa13.96□□□□□ -0.18
MSH5-201ENST00000375703 SYTL1Q8IYJ3 562 aa13.96□□□□□ -0.18
MSH5-201ENST00000375703 GLYATL1Q969I3 302 aa13.96□□□□□ -0.18
MSH5-201ENST00000375703 CIDECQ96AQ7 238 aaPredicted RBP13.96□□□□□ -0.18
MSH5-201ENST00000375703 C1GALT1Q9NS00 363 aa13.96□□□□□ -0.18
MSH5-201ENST00000375703 IMPAD1Q9NX62 359 aa13.96□□□□□ -0.18
MSH5-201ENST00000375703 WDR37Q9Y2I8 494 aa13.96□□□□□ -0.18
MSH5-201ENST00000375703 MAP4K5Q9Y4K4 846 aa13.96□□□□□ -0.18
MSH5-201ENST00000375703 TLL1O43897 1013 aa13.95□□□□□ -0.18
MSH5-201ENST00000375703 MYCP01106 439 aaPredicted RBP13.95□□□□□ -0.18
MSH5-201ENST00000375703 SERPINB1P30740 379 aa13.95□□□□□ -0.18
MSH5-201ENST00000375703 GRK5P34947 590 aa13.95□□□□□ -0.18
MSH5-201ENST00000375703 SLC13A2Q13183 592 aa13.95□□□□□ -0.18
MSH5-201ENST00000375703 FBXO43Q4G163 708 aa13.95□□□□□ -0.18
MSH5-201ENST00000375703 ARMCX4Q5H9R4 360 aa13.95□□□□□ -0.18
MSH5-201ENST00000375703 COMMD6Q7Z4G1 85 aa13.95□□□□□ -0.18
MSH5-201ENST00000375703 ADIPOR2Q86V24 386 aa13.95□□□□□ -0.18
MSH5-201ENST00000375703 OR9Q2Q8NGE9 314 aa13.95□□□□□ -0.18
MSH5-201ENST00000375703 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.95□□□□□ -0.18
MSH5-201ENST00000375703 ZNF480Q8WV37 535 aa13.95□□□□□ -0.18
MSH5-201ENST00000375703 PPCDCQ96CD2 204 aa13.95□□□□□ -0.18
MSH5-201ENST00000375703 ZNF689Q96CS4 500 aaPredicted RBP13.95□□□□□ -0.18
MSH5-201ENST00000375703 RAD9AQ99638 391 aa13.95□□□□□ -0.18
MSH5-201ENST00000375703 KLHL25Q9H0H3 589 aa13.95□□□□□ -0.18
MSH5-201ENST00000375703 OR51E2Q9H255 320 aa13.95□□□□□ -0.18
MSH5-201ENST00000375703 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.95□□□□□ -0.18
MSH5-201ENST00000375703 THSD1Q9NS62 852 aa13.95□□□□□ -0.18
MSH5-201ENST00000375703 ANKMY1Q9P2S6 941 aa13.95□□□□□ -0.18
MSH5-201ENST00000375703 ACSL6Q9UKU0 697 aa13.95□□□□□ -0.18
MSH5-201ENST00000375703 DUSP12Q9UNI6 340 aa13.95□□□□□ -0.18
MSH5-201ENST00000375703 PCDH17O14917 1159 aa13.95□□□□□ -0.18
MSH5-201ENST00000375703 TBX1O43435 398 aa13.95□□□□□ -0.18
MSH5-201ENST00000375703 GPR37L1O60883 481 aa13.95□□□□□ -0.18
MSH5-201ENST00000375703 NPPBP16860 134 aa13.95□□□□□ -0.18
MSH5-201ENST00000375703 GABRB1P18505 474 aa13.95□□□□□ -0.18
MSH5-201ENST00000375703 CHI3L1P36222 383 aaPredicted RBP13.95□□□□□ -0.18
MSH5-201ENST00000375703 PRLHRP49683 370 aa13.95□□□□□ -0.18
MSH5-201ENST00000375703 CYP4F2P78329 520 aa13.95□□□□□ -0.18
MSH5-201ENST00000375703 CDK6Q00534 326 aa13.95□□□□□ -0.18
MSH5-201ENST00000375703 FCHO2Q0JRZ9 810 aa13.95□□□□□ -0.18
MSH5-201ENST00000375703 ELOAQ14241 798 aaKnown RBP13.95□□□□□ -0.18
MSH5-201ENST00000375703 POM121L1PQ3SYA9 428 aa13.95□□□□□ -0.18
MSH5-201ENST00000375703 IER5LQ5T953 404 aa13.95□□□□□ -0.18
MSH5-201ENST00000375703 TRIM40Q6P9F5 258 aa13.95□□□□□ -0.18
MSH5-201ENST00000375703 SLAIN1Q8ND83 568 aa13.95□□□□□ -0.18
MSH5-201ENST00000375703 ABHD8Q96I13 439 aa13.95□□□□□ -0.18
MSH5-201ENST00000375703 OR51B5Q9H339 312 aa13.95□□□□□ -0.18
MSH5-201ENST00000375703 EHD1Q9H4M9 534 aa13.95□□□□□ -0.18
MSH5-201ENST00000375703 TMEM38AQ9H6F2 299 aa13.95□□□□□ -0.18
MSH5-201ENST00000375703 SP140LQ9H930 580 aa13.95□□□□□ -0.18
MSH5-201ENST00000375703 MS4A12Q9NXJ0 267 aa13.95□□□□□ -0.18
MSH5-201ENST00000375703 FAM32AQ9Y421 112 aaKnown RBP13.95□□□□□ -0.18
MSH5-201ENST00000375703 SAGE2PA6NJ88 616 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 H3BM21 787 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 DSCR3O14972 297 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 C1orf105O95561 183 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 PTHP01270 115 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 FURINP09958 794 aa13.94□□□□□ -0.18
MSH5-201ENST00000375703 HSMCR30P0CW71 290 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms