RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 PROKR1Q8TCW9 393 aa16.39■□□□□ 0.21
HLA-DMA-201ENST00000374843 UTP15Q8TED0 518 aaKnown RBP16.39■□□□□ 0.21
HLA-DMA-201ENST00000374843 TSPEARQ8WU66 669 aa16.39■□□□□ 0.21
HLA-DMA-201ENST00000374843 CMTM5Q96DZ9 223 aa16.39■□□□□ 0.21
HLA-DMA-201ENST00000374843 TEFMQ96QE5 360 aaKnown RBP16.39■□□□□ 0.21
HLA-DMA-201ENST00000374843 GFM1Q96RP9 751 aaKnown RBP16.39■□□□□ 0.21
HLA-DMA-201ENST00000374843 TUBB6Q9BUF5 446 aa16.39■□□□□ 0.21
HLA-DMA-201ENST00000374843 EBPLQ9BY08 206 aa16.39■□□□□ 0.21
HLA-DMA-201ENST00000374843 NLNQ9BYT8 704 aa16.39■□□□□ 0.21
HLA-DMA-201ENST00000374843 PRM3Q9NNZ6 103 aa16.39■□□□□ 0.21
HLA-DMA-201ENST00000374843 MYNNQ9NPC7 610 aa16.39■□□□□ 0.21
HLA-DMA-201ENST00000374843 PRDM7Q9NQW5 492 aa16.39■□□□□ 0.21
HLA-DMA-201ENST00000374843 KLHL3Q9UH77 587 aa16.39■□□□□ 0.21
HLA-DMA-201ENST00000374843 WBP11Q9Y2W2 641 aaKnown RBP16.39■□□□□ 0.21
HLA-DMA-201ENST00000374843 MDC1Q14676 2089 aaKnown RBP16.39■□□□□ 0.21
HLA-DMA-201ENST00000374843 FAM234BA2RU67 622 aa16.38■□□□□ 0.21
HLA-DMA-201ENST00000374843 FITM1A5D6W6 292 aa16.38■□□□□ 0.21
HLA-DMA-201ENST00000374843 URADA6NGE7 173 aa16.38■□□□□ 0.21
HLA-DMA-201ENST00000374843 H3BMH7 237 aa16.38■□□□□ 0.21
HLA-DMA-201ENST00000374843 EEDO75530 441 aaKnown RBP16.38■□□□□ 0.21
HLA-DMA-201ENST00000374843 SLC22A3O75751 556 aa16.38■□□□□ 0.21
HLA-DMA-201ENST00000374843 ANXA4P09525 319 aaPredicted RBP16.38■□□□□ 0.21
HLA-DMA-201ENST00000374843 T-ENOLP0DO92 83 aa16.38■□□□□ 0.21
HLA-DMA-201ENST00000374843 HIST1H1TP22492 207 aaPredicted RBP16.38■□□□□ 0.21
HLA-DMA-201ENST00000374843 LIMK1P53667 647 aa16.38■□□□□ 0.21
HLA-DMA-201ENST00000374843 CLNS1AP54105 237 aaKnown RBP16.38■□□□□ 0.21
HLA-DMA-201ENST00000374843 EMP3P54852 163 aa16.38■□□□□ 0.21
HLA-DMA-201ENST00000374843 VSX2P58304 361 aaPredicted RBP16.38■□□□□ 0.21
HLA-DMA-201ENST00000374843 UFM1P61960 85 aa16.38■□□□□ 0.21
HLA-DMA-201ENST00000374843 TRA2AQ13595 282 aaKnown RBP eCLIP16.38■□□□□ 0.21
HLA-DMA-201ENST00000374843 HKDC1Q2TB90 917 aa16.38■□□□□ 0.21
HLA-DMA-201ENST00000374843 AGKQ53H12 422 aa16.38■□□□□ 0.21
HLA-DMA-201ENST00000374843 LACTB2Q53H82 288 aaPredicted RBP16.38■□□□□ 0.21
HLA-DMA-201ENST00000374843 TCTE1Q5JU00 501 aa16.38■□□□□ 0.21
HLA-DMA-201ENST00000374843 OR4C11Q6IEV9 310 aa16.38■□□□□ 0.21
HLA-DMA-201ENST00000374843 ZNF793Q6ZN11 406 aa16.38■□□□□ 0.21
HLA-DMA-201ENST00000374843 CCDC121Q6ZUS5 278 aa16.38■□□□□ 0.21
HLA-DMA-201ENST00000374843 IKBIPQ70UQ0 350 aa16.38■□□□□ 0.21
HLA-DMA-201ENST00000374843 RIMKLAQ8IXN7 391 aa16.38■□□□□ 0.21
HLA-DMA-201ENST00000374843 KCT2Q8NC54 265 aa16.38■□□□□ 0.21
HLA-DMA-201ENST00000374843 TEX37Q96LM6 180 aa16.38■□□□□ 0.21
HLA-DMA-201ENST00000374843 CCDC74BQ96LY2 380 aa16.38■□□□□ 0.21
HLA-DMA-201ENST00000374843 MACROD1Q9BQ69 325 aa16.38■□□□□ 0.21
HLA-DMA-201ENST00000374843 C17orf62Q9BQA9 187 aa16.38■□□□□ 0.21
HLA-DMA-201ENST00000374843 SORBS1Q9BX66 1292 aaKnown RBP16.38■□□□□ 0.21
HLA-DMA-201ENST00000374843 ROGDIQ9GZN7 287 aa16.38■□□□□ 0.21
HLA-DMA-201ENST00000374843 CLMPQ9H6B4 373 aa16.38■□□□□ 0.21
HLA-DMA-201ENST00000374843 TAGLN3Q9UI15 199 aa16.38■□□□□ 0.21
HLA-DMA-201ENST00000374843 MAPRE3Q9UPY8 281 aa16.38■□□□□ 0.21
HLA-DMA-201ENST00000374843 SLC22A7Q9Y694 548 aa16.38■□□□□ 0.21
HLA-DMA-201ENST00000374843 RTCAO00442 366 aaKnown RBP16.37■□□□□ 0.21
HLA-DMA-201ENST00000374843 UNC5CO95185 931 aa16.37■□□□□ 0.21
HLA-DMA-201ENST00000374843 CBX6O95503 412 aa16.37■□□□□ 0.21
HLA-DMA-201ENST00000374843 KLK1P06870 262 aa16.37■□□□□ 0.21
HLA-DMA-201ENST00000374843 ZNF888P0CJ79 500 aaPredicted RBP16.37■□□□□ 0.21
HLA-DMA-201ENST00000374843 COX4I1P13073 169 aa16.37■□□□□ 0.21
HLA-DMA-201ENST00000374843 CD1EP15812 388 aa16.37■□□□□ 0.21
HLA-DMA-201ENST00000374843 PRPS1L1P21108 318 aa16.37■□□□□ 0.21
HLA-DMA-201ENST00000374843 CALB2P22676 271 aa16.37■□□□□ 0.21
HLA-DMA-201ENST00000374843 IL12AP29459 219 aa16.37■□□□□ 0.21
HLA-DMA-201ENST00000374843 SSR2P43308 183 aa16.37■□□□□ 0.21
HLA-DMA-201ENST00000374843 GCGRP47871 477 aa16.37■□□□□ 0.21
HLA-DMA-201ENST00000374843 PLA2G16P53816 162 aa16.37■□□□□ 0.21
HLA-DMA-201ENST00000374843 TRA2BP62995 288 aaKnown RBP16.37■□□□□ 0.21
HLA-DMA-201ENST00000374843 ZFP36L1Q07352 338 aaKnown RBP16.37■□□□□ 0.21
HLA-DMA-201ENST00000374843 SPRED3Q2MJR0 410 aa16.37■□□□□ 0.21
HLA-DMA-201ENST00000374843 TMTC4Q5T4D3 741 aa16.37■□□□□ 0.21
HLA-DMA-201ENST00000374843 STPG1Q5TH74 334 aa16.37■□□□□ 0.21
HLA-DMA-201ENST00000374843 MRM1Q6IN84 353 aaKnown RBP16.37■□□□□ 0.21
HLA-DMA-201ENST00000374843 BLOC1S3Q6QNY0 202 aa16.37■□□□□ 0.21
HLA-DMA-201ENST00000374843 GK5Q6ZS86 529 aa16.37■□□□□ 0.21
HLA-DMA-201ENST00000374843 ABHD13Q7L211 337 aa16.37■□□□□ 0.21
HLA-DMA-201ENST00000374843 SNX32Q86XE0 403 aa16.37■□□□□ 0.21
HLA-DMA-201ENST00000374843 RP9Q8TA86 221 aaKnown RBP16.37■□□□□ 0.21
HLA-DMA-201ENST00000374843 STARD8Q92502 1023 aa16.37■□□□□ 0.21
HLA-DMA-201ENST00000374843 TESCQ96BS2 214 aa16.37■□□□□ 0.21
HLA-DMA-201ENST00000374843 ZNF764Q96H86 408 aaPredicted RBP16.37■□□□□ 0.21
HLA-DMA-201ENST00000374843 NSL1Q96IY1 281 aa16.37■□□□□ 0.21
HLA-DMA-201ENST00000374843 TSSK3Q96PN8 268 aa16.37■□□□□ 0.21
HLA-DMA-201ENST00000374843 DPY30Q9C005 99 aa16.37■□□□□ 0.21
HLA-DMA-201ENST00000374843 SLC52A3Q9NQ40 469 aa16.37■□□□□ 0.21
HLA-DMA-201ENST00000374843 TXLNGQ9NUQ3 528 aa16.37■□□□□ 0.21
HLA-DMA-201ENST00000374843 SIDT1Q9NXL6 827 aaKnown RBP16.37■□□□□ 0.21
HLA-DMA-201ENST00000374843 CCDC167Q9P0B6 97 aa16.37■□□□□ 0.21
HLA-DMA-201ENST00000374843 ASCC3Q8N3C0 2202 aaKnown RBP16.37■□□□□ 0.21
HLA-DMA-201ENST00000374843 GNG14A0A1W2PPG7 69 aa16.36■□□□□ 0.21
HLA-DMA-201ENST00000374843 DYTNA2CJ06 578 aa16.36■□□□□ 0.21
HLA-DMA-201ENST00000374843 TMPRSS11DO60235 418 aa16.36■□□□□ 0.21
HLA-DMA-201ENST00000374843 HNRNPCL1O60812 293 aaKnown RBP16.36■□□□□ 0.21
HLA-DMA-201ENST00000374843 CTSBP07858 339 aa16.36■□□□□ 0.21
HLA-DMA-201ENST00000374843 ALOX12P18054 663 aa16.36■□□□□ 0.21
HLA-DMA-201ENST00000374843 ATP5A1P25705 553 aaKnown RBP16.36■□□□□ 0.21
HLA-DMA-201ENST00000374843 ARL4DP49703 201 aa16.36■□□□□ 0.21
HLA-DMA-201ENST00000374843 SEPHS1P49903 392 aa16.36■□□□□ 0.21
HLA-DMA-201ENST00000374843 PDX1P52945 283 aa16.36■□□□□ 0.21
HLA-DMA-201ENST00000374843 NME5P56597 212 aa16.36■□□□□ 0.21
HLA-DMA-201ENST00000374843 SPIDRQ14159 915 aa16.36■□□□□ 0.21
HLA-DMA-201ENST00000374843 KCNAB1Q14722 419 aa16.36■□□□□ 0.21
HLA-DMA-201ENST00000374843 DPY19L1Q2PZI1 675 aa16.36■□□□□ 0.21
HLA-DMA-201ENST00000374843 COQ5Q5HYK3 327 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms