RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 SUDS3Q9H7L9 328 aaPredicted RBP4.66□□□□□ -1.66
USP48-202ENST00000374730 TMEM45AQ9NWC5 275 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 ZSCAN32Q9NX65 697 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 TAS2R13Q9NYV9 303 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 DLGAP2Q9P1A6 1054 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 AFF4Q9UHB7 1163 aaKnown RBP4.66□□□□□ -1.66
USP48-202ENST00000374730 AGO1Q9UL18 857 aaKnown RBP4.66□□□□□ -1.66
USP48-202ENST00000374730 RAB26Q9ULW5 256 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 CRYL1Q9Y2S2 319 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 GPR52Q9Y2T5 361 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 DTNAQ9Y4J8 743 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 ARL5AQ9Y689 179 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 ZFP37Q9Y6Q3 630 aaPredicted RBP4.66□□□□□ -1.66
USP48-202ENST00000374730 CACNA1IQ9P0X4 2223 aa4.65□□□□□ -1.66
USP48-202ENST00000374730 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.65□□□□□ -1.67
USP48-202ENST00000374730 TCRBV3S1A0A5B6 114 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 H0YJX3 145 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 H3BMM5 538 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 UBXN8O00124 270 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 FBP2O00757 339 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 MRASO14807 208 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 CFLARO15519 480 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 ADAM12O43184 909 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 DENRO43583 198 aaKnown RBP4.65□□□□□ -1.67
USP48-202ENST00000374730 RNASEH1O60930 286 aaKnown RBP4.65□□□□□ -1.67
USP48-202ENST00000374730 VPS26AO75436 327 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 NDUFS3O75489 264 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 ECI2O75521 394 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 RHOBTB1O94844 696 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 TMCC1O94876 653 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 OLFM2O95897 454 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 SLC4A1P02730 911 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 KLKB1P03952 638 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 ALDOCP09972 364 aaKnown RBP4.65□□□□□ -1.67
USP48-202ENST00000374730 GFAPP14136 432 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 PKMP14618 531 aaKnown RBP4.65□□□□□ -1.67
USP48-202ENST00000374730 GPX3P22352 226 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 PAX7P23759 505 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 CORO1AP31146 461 aaKnown RBP4.65□□□□□ -1.67
USP48-202ENST00000374730 RXRGP48443 463 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 PRIM2P49643 509 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 ERFP50548 548 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 PRKAG1P54619 331 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 PKNOX1P55347 436 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 RPS24P62847 133 aaKnown RBP4.65□□□□□ -1.67
USP48-202ENST00000374730 MRPS22P82650 360 aaKnown RBP4.65□□□□□ -1.67
USP48-202ENST00000374730 ARF5P84085 180 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 MS4A2Q01362 244 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 RAD51Q06609 339 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 TRAF2Q12933 501 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 GRIK2Q13002 908 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 ZNF177Q13360 481 aaPredicted RBP4.65□□□□□ -1.67
USP48-202ENST00000374730 MED21Q13503 144 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 KLF9Q13886 244 aaPredicted RBP4.65□□□□□ -1.67
USP48-202ENST00000374730 PTPRCAPQ14761 206 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 CYTH1Q15438 398 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 PPP1R3AQ16821 1122 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 TCTN1Q2MV58 587 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 MMEL1Q495T6 779 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 AGKQ53H12 422 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 SETMARQ53H47 684 aaPredicted RBP4.65□□□□□ -1.67
USP48-202ENST00000374730 XKR7Q5GH72 579 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 CLEC6AQ6EIG7 209 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 MZT2BQ6NZ67 158 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 NCEH1Q6PIU2 408 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 GLT6D1Q7Z4J2 308 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 FUNDC1Q8IVP5 155 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 HERC6Q8IVU3 1022 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 ST13P4Q8IZP2 240 aaPredicted RBP4.65□□□□□ -1.67
USP48-202ENST00000374730 STK40Q8N2I9 435 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 GALNT4Q8N4A0 578 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 FBXO39Q8N4B4 442 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 TTC30BQ8N4P2 665 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 CHCHD4Q8N4Q1 142 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 PNPLA1Q8N8W4 532 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 PCYOX1LQ8NBM8 494 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 HJURPQ8NCD3 748 aaPredicted RBP4.65□□□□□ -1.67
USP48-202ENST00000374730 ICA1LQ8NDH6 482 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 OR4K2Q8NGD2 314 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 TWIST2Q8WVJ9 160 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 KCNJ9Q92806 393 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 USP13Q92995 863 aaPredicted RBP4.65□□□□□ -1.67
USP48-202ENST00000374730 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.65□□□□□ -1.67
USP48-202ENST00000374730 RMDN1Q96DB5 314 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 TMA16Q96EY4 203 aaKnown RBP4.65□□□□□ -1.67
USP48-202ENST00000374730 DCUN1D1Q96GG9 259 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 RITA1Q96K30 269 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 NSMCE3Q96MG7 304 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 CCT7Q99832 543 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 HOPXQ9BPY8 73 aaPredicted RBP4.65□□□□□ -1.67
USP48-202ENST00000374730 GPATCH1Q9BRR8 931 aaKnown RBP4.65□□□□□ -1.67
USP48-202ENST00000374730 DPCDQ9BVM2 203 aaPredicted RBP4.65□□□□□ -1.67
USP48-202ENST00000374730 HERC2P3Q9BVR0 1158 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 VN1R3Q9BXE9 311 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 QTRT1Q9BXR0 403 aaKnown RBP4.65□□□□□ -1.67
USP48-202ENST00000374730 ADGRE3Q9BY15 652 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 NACA2Q9H009 215 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 Q9H521 79 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 SMURF2Q9HAU4 748 aa4.65□□□□□ -1.67
USP48-202ENST00000374730 SPAG4Q9NPE6 437 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms