RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 CCDC74AQ96AQ1 378 aa15.35■□□□□ 0.05
C9orf78-201ENST00000372447 PPWD1Q96BP3 646 aaKnown RBP15.35■□□□□ 0.05
C9orf78-201ENST00000372447 FCRL1Q96LA6 429 aa15.35■□□□□ 0.05
C9orf78-201ENST00000372447 TSSK3Q96PN8 268 aa15.35■□□□□ 0.05
C9orf78-201ENST00000372447 NRTNQ99748 197 aa15.35■□□□□ 0.05
C9orf78-201ENST00000372447 TRIT1Q9H3H1 467 aaKnown RBP15.35■□□□□ 0.05
C9orf78-201ENST00000372447 KIR3DX1Q9H7L2 352 aa15.35■□□□□ 0.05
C9orf78-201ENST00000372447 VPS29Q9UBQ0 182 aa15.35■□□□□ 0.05
C9orf78-201ENST00000372447 AURKCQ9UQB9 309 aa15.35■□□□□ 0.05
C9orf78-201ENST00000372447 PCDHB3Q9Y5E6 796 aa15.35■□□□□ 0.05
C9orf78-201ENST00000372447 KCNE2Q9Y6J6 123 aa15.35■□□□□ 0.05
C9orf78-201ENST00000372447 TCRBV5S2A0A599 114 aa15.34■□□□□ 0.05
C9orf78-201ENST00000372447 CASC3O15234 703 aaKnown RBP15.34■□□□□ 0.05
C9orf78-201ENST00000372447 HNRNPRO43390 633 aaKnown RBP15.34■□□□□ 0.05
C9orf78-201ENST00000372447 AKAP10O43572 662 aa15.34■□□□□ 0.05
C9orf78-201ENST00000372447 SMNDC1O75940 238 aaKnown RBP eCLIP15.34■□□□□ 0.05
C9orf78-201ENST00000372447 GPIP06744 558 aa15.34■□□□□ 0.05
C9orf78-201ENST00000372447 TACR1P25103 407 aa15.34■□□□□ 0.05
C9orf78-201ENST00000372447 OR4D2P58180 307 aa15.34■□□□□ 0.05
C9orf78-201ENST00000372447 NOXRED1Q6NXP6 359 aa15.34■□□□□ 0.05
C9orf78-201ENST00000372447 AMIGO2Q86SJ2 522 aa15.34■□□□□ 0.05
C9orf78-201ENST00000372447 RBM12BQ8IXT5 1001 aaKnown RBP15.34■□□□□ 0.05
C9orf78-201ENST00000372447 SYTL1Q8IYJ3 562 aa15.34■□□□□ 0.05
C9orf78-201ENST00000372447 ADGRG5Q8IZF4 528 aa15.34■□□□□ 0.05
C9orf78-201ENST00000372447 OR9A1PQ8NGU1 263 aa15.34■□□□□ 0.05
C9orf78-201ENST00000372447 DNAJB8Q8NHS0 232 aa15.34■□□□□ 0.05
C9orf78-201ENST00000372447 IFI44Q8TCB0 444 aa15.34■□□□□ 0.05
C9orf78-201ENST00000372447 ZFPM2Q8WW38 1151 aa15.34■□□□□ 0.05
C9orf78-201ENST00000372447 JPH3Q8WXH2 748 aaPredicted RBP15.34■□□□□ 0.05
C9orf78-201ENST00000372447 NAT6Q93015 286 aa15.34■□□□□ 0.05
C9orf78-201ENST00000372447 SH3KBP1Q96B97 665 aa15.34■□□□□ 0.05
C9orf78-201ENST00000372447 TESCQ96BS2 214 aa15.34■□□□□ 0.05
C9orf78-201ENST00000372447 MTERF1Q99551 399 aaKnown RBP15.34■□□□□ 0.05
C9orf78-201ENST00000372447 SLC38A3Q99624 504 aa15.34■□□□□ 0.05
C9orf78-201ENST00000372447 PIF1Q9H611 641 aa15.34■□□□□ 0.05
C9orf78-201ENST00000372447 SCOCQ9UIL1 159 aa15.34■□□□□ 0.05
C9orf78-201ENST00000372447 RAB26Q9ULW5 256 aa15.34■□□□□ 0.05
C9orf78-201ENST00000372447 USP22Q9UPT9 525 aa15.34■□□□□ 0.05
C9orf78-201ENST00000372447 TDRKHQ9Y2W6 561 aaKnown RBP15.34■□□□□ 0.05
C9orf78-201ENST00000372447 PCDHGA11Q9Y5H2 935 aa15.34■□□□□ 0.05
C9orf78-201ENST00000372447 TXNDC9O14530 226 aa15.34■□□□□ 0.05
C9orf78-201ENST00000372447 DENRO43583 198 aaKnown RBP15.34■□□□□ 0.05
C9orf78-201ENST00000372447 LYNP07948 512 aa15.34■□□□□ 0.05
C9orf78-201ENST00000372447 UBTFL6P0CB48 400 aaPredicted RBP15.34■□□□□ 0.05
C9orf78-201ENST00000372447 HSD3B1P14060 373 aa15.34■□□□□ 0.05
C9orf78-201ENST00000372447 PNLIPP16233 465 aa15.34■□□□□ 0.05
C9orf78-201ENST00000372447 ZNF26P17031 533 aaPredicted RBP15.34■□□□□ 0.05
C9orf78-201ENST00000372447 HRH2P25021 359 aa15.34■□□□□ 0.05
C9orf78-201ENST00000372447 HSD3B2P26439 372 aa15.34■□□□□ 0.05
C9orf78-201ENST00000372447 ALDH4A1P30038 563 aa15.34■□□□□ 0.05
C9orf78-201ENST00000372447 S100A3P33764 101 aa15.34■□□□□ 0.05
C9orf78-201ENST00000372447 SOX11P35716 441 aa15.34■□□□□ 0.05
C9orf78-201ENST00000372447 HSPA13P48723 471 aa15.34■□□□□ 0.05
C9orf78-201ENST00000372447 TBPL1P62380 186 aa15.34■□□□□ 0.05
C9orf78-201ENST00000372447 E2F2Q14209 437 aa15.34■□□□□ 0.05
C9orf78-201ENST00000372447 NR1D2Q14995 579 aa15.34■□□□□ 0.05
C9orf78-201ENST00000372447 CYP51A1Q16850 503 aa15.34■□□□□ 0.05
C9orf78-201ENST00000372447 MTX3Q5HYI7 312 aa15.34■□□□□ 0.05
C9orf78-201ENST00000372447 GALNT4Q8N4A0 578 aa15.34■□□□□ 0.05
C9orf78-201ENST00000372447 ANKFN1Q8N957 763 aa15.34■□□□□ 0.05
C9orf78-201ENST00000372447 Q8N9G6 341 aaPredicted RBP15.34■□□□□ 0.05
C9orf78-201ENST00000372447 OR52E1Q8NGJ3 308 aa15.34■□□□□ 0.05
C9orf78-201ENST00000372447 FAM110BQ8TC76 370 aa15.34■□□□□ 0.05
C9orf78-201ENST00000372447 NEIL2Q969S2 332 aa15.34■□□□□ 0.05
C9orf78-201ENST00000372447 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.34■□□□□ 0.05
C9orf78-201ENST00000372447 Q9H521 79 aa15.34■□□□□ 0.05
C9orf78-201ENST00000372447 UCK1Q9HA47 277 aa15.34■□□□□ 0.05
C9orf78-201ENST00000372447 BRF2Q9HAW0 419 aa15.34■□□□□ 0.05
C9orf78-201ENST00000372447 EVA1BQ9NVM1 165 aa15.34■□□□□ 0.05
C9orf78-201ENST00000372447 TOR4AQ9NXH8 423 aa15.34■□□□□ 0.05
C9orf78-201ENST00000372447 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.34■□□□□ 0.05
C9orf78-201ENST00000372447 MAGEL2Q9UJ55 1249 aa15.34■□□□□ 0.05
C9orf78-201ENST00000372447 CNOT1A5YKK6 2376 aaKnown RBP15.33■□□□□ 0.04
C9orf78-201ENST00000372447 RP1P56715 2156 aa15.33■□□□□ 0.04
C9orf78-201ENST00000372447 A6NHS1 94 aa15.33■□□□□ 0.04
C9orf78-201ENST00000372447 B4GAT1O43505 415 aa15.33■□□□□ 0.04
C9orf78-201ENST00000372447 RPN2P04844 631 aa15.33■□□□□ 0.04
C9orf78-201ENST00000372447 UMPSP11172 480 aa15.33■□□□□ 0.04
C9orf78-201ENST00000372447 BMP2P12643 396 aa15.33■□□□□ 0.04
C9orf78-201ENST00000372447 GPR3P46089 330 aa15.33■□□□□ 0.04
C9orf78-201ENST00000372447 OR1D5P58170 312 aa15.33■□□□□ 0.04
C9orf78-201ENST00000372447 PHC1P78364 1004 aa15.33■□□□□ 0.04
C9orf78-201ENST00000372447 DDX39BQ13838 428 aaKnown RBP15.33■□□□□ 0.04
C9orf78-201ENST00000372447 SLCO4C1Q6ZQN7 724 aa15.33■□□□□ 0.04
C9orf78-201ENST00000372447 GLRX5Q86SX6 157 aa15.33■□□□□ 0.04
C9orf78-201ENST00000372447 DCUN1D3Q8IWE4 304 aa15.33■□□□□ 0.04
C9orf78-201ENST00000372447 MSRB3Q8IXL7 192 aa15.33■□□□□ 0.04
C9orf78-201ENST00000372447 RIMKLAQ8IXN7 391 aa15.33■□□□□ 0.04
C9orf78-201ENST00000372447 METTL2AQ96IZ6 378 aaKnown RBP15.33■□□□□ 0.04
C9orf78-201ENST00000372447 SH3GL1Q99961 368 aa15.33■□□□□ 0.04
C9orf78-201ENST00000372447 CCDC3Q9BQI4 270 aa15.33■□□□□ 0.04
C9orf78-201ENST00000372447 SGPP1Q9BX95 441 aa15.33■□□□□ 0.04
C9orf78-201ENST00000372447 RMND5AQ9H871 391 aa15.33■□□□□ 0.04
C9orf78-201ENST00000372447 COQ10BQ9H8M1 238 aa15.33■□□□□ 0.04
C9orf78-201ENST00000372447 SLC25A37Q9NYZ2 338 aa15.33■□□□□ 0.04
C9orf78-201ENST00000372447 PLAGL1Q9UM63 463 aa15.33■□□□□ 0.04
C9orf78-201ENST00000372447 PPT2Q9UMR5 302 aa15.33■□□□□ 0.04
C9orf78-201ENST00000372447 LILRA5A6NI73 299 aa15.32■□□□□ 0.04
C9orf78-201ENST00000372447 H0YJX3 145 aa15.32■□□□□ 0.04
C9orf78-201ENST00000372447 ERN1O75460 977 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms