RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 ZNF324BQ6AW86 544 aaPredicted RBP17.76■□□□□ 0.43
TMEM53-201ENST00000372235 SLCO4C1Q6ZQN7 724 aa17.76■□□□□ 0.43
TMEM53-201ENST00000372235 ANKRD53Q8N9V6 530 aa17.76■□□□□ 0.43
TMEM53-201ENST00000372235 FAM98AQ8NCA5 519 aaKnown RBP17.76■□□□□ 0.43
TMEM53-201ENST00000372235 OR5T3Q8NGG3 340 aa17.76■□□□□ 0.43
TMEM53-201ENST00000372235 STAG3L4Q8TBR4 150 aa17.76■□□□□ 0.43
TMEM53-201ENST00000372235 CREB3L4Q8TEY5 395 aa17.76■□□□□ 0.43
TMEM53-201ENST00000372235 KIAA1191Q96A73 305 aa17.76■□□□□ 0.43
TMEM53-201ENST00000372235 SMIM10Q96HG1 83 aa17.76■□□□□ 0.43
TMEM53-201ENST00000372235 EFCAB11Q9BUY7 163 aa17.76■□□□□ 0.43
TMEM53-201ENST00000372235 GRHL1Q9NZI5 618 aa17.76■□□□□ 0.43
TMEM53-201ENST00000372235 RP1L1Q8IWN7 2480 aaPredicted RBP17.76■□□□□ 0.43
TMEM53-201ENST00000372235 HECTD1Q9ULT8 2610 aa17.75■□□□□ 0.43
TMEM53-201ENST00000372235 PTPN13Q12923 2485 aa17.75■□□□□ 0.43
TMEM53-201ENST00000372235 WISP3O95389 354 aaPredicted RBP17.75■□□□□ 0.43
TMEM53-201ENST00000372235 STSP08842 583 aa17.75■□□□□ 0.43
TMEM53-201ENST00000372235 CD46P15529 392 aa17.75■□□□□ 0.43
TMEM53-201ENST00000372235 CD1DP15813 335 aa17.75■□□□□ 0.43
TMEM53-201ENST00000372235 CRABP2P29373 138 aa17.75■□□□□ 0.43
TMEM53-201ENST00000372235 EFNA3P52797 238 aa17.75■□□□□ 0.43
TMEM53-201ENST00000372235 SLC26A5P58743 744 aa17.75■□□□□ 0.43
TMEM53-201ENST00000372235 RAB8AP61006 207 aa17.75■□□□□ 0.43
TMEM53-201ENST00000372235 SNRPNP63162 240 aaKnown RBP17.75■□□□□ 0.43
TMEM53-201ENST00000372235 C2orf54Q08AI8 447 aa17.75■□□□□ 0.43
TMEM53-201ENST00000372235 TERF2Q15554 542 aa17.75■□□□□ 0.43
TMEM53-201ENST00000372235 ZKSCAN8Q15776 578 aaPredicted RBP17.75■□□□□ 0.43
TMEM53-201ENST00000372235 ZNF766Q5HY98 468 aa17.75■□□□□ 0.43
TMEM53-201ENST00000372235 TOR1AIP1Q5JTV8 583 aa17.75■□□□□ 0.43
TMEM53-201ENST00000372235 TRIM40Q6P9F5 258 aa17.75■□□□□ 0.43
TMEM53-201ENST00000372235 ZNF572Q7Z3I7 529 aaPredicted RBP17.75■□□□□ 0.43
TMEM53-201ENST00000372235 TBC1D1Q86TI0 1168 aaPredicted RBP17.75■□□□□ 0.43
TMEM53-201ENST00000372235 TMEM178AQ8NBL3 297 aa17.75■□□□□ 0.43
TMEM53-201ENST00000372235 PDPRQ8NCN5 879 aa17.75■□□□□ 0.43
TMEM53-201ENST00000372235 SRFBP1Q8NEF9 429 aaKnown RBP17.75■□□□□ 0.43
TMEM53-201ENST00000372235 UBE2E3Q969T4 207 aa17.75■□□□□ 0.43
TMEM53-201ENST00000372235 PTCD3Q96EY7 689 aaKnown RBP17.75■□□□□ 0.43
TMEM53-201ENST00000372235 UBXN10Q96LJ8 280 aa17.75■□□□□ 0.43
TMEM53-201ENST00000372235 ROGDIQ9GZN7 287 aa17.75■□□□□ 0.43
TMEM53-201ENST00000372235 SPNS1Q9H2V7 528 aa17.75■□□□□ 0.43
TMEM53-201ENST00000372235 NMRAL1Q9HBL8 299 aa17.75■□□□□ 0.43
TMEM53-201ENST00000372235 SMYD2Q9NRG4 433 aa17.75■□□□□ 0.43
TMEM53-201ENST00000372235 CD274Q9NZQ7 290 aa17.75■□□□□ 0.43
TMEM53-201ENST00000372235 RNF112Q9ULX5 631 aa17.75■□□□□ 0.43
TMEM53-201ENST00000372235 OSGIN2Q9Y236 505 aa17.75■□□□□ 0.43
TMEM53-201ENST00000372235 FLNCQ14315 2725 aa17.74■□□□□ 0.43
TMEM53-201ENST00000372235 NCF1BA6NI72 391 aaPredicted RBP17.74■□□□□ 0.43
TMEM53-201ENST00000372235 NCF1CA8MVU1 366 aaPredicted RBP17.74■□□□□ 0.43
TMEM53-201ENST00000372235 B4GALT2O60909 372 aa17.74■□□□□ 0.43
TMEM53-201ENST00000372235 NCF1P14598 390 aaPredicted RBP17.74■□□□□ 0.43
TMEM53-201ENST00000372235 HNF4AP41235 474 aa17.74■□□□□ 0.43
TMEM53-201ENST00000372235 MAGEA4P43358 317 aa17.74■□□□□ 0.43
TMEM53-201ENST00000372235 HYAL2Q12891 473 aa17.74■□□□□ 0.43
TMEM53-201ENST00000372235 SLBPQ14493 270 aaKnown RBP eCLIP17.74■□□□□ 0.43
TMEM53-201ENST00000372235 PDK4Q16654 411 aa17.74■□□□□ 0.43
TMEM53-201ENST00000372235 MTFR2Q6P444 385 aa17.74■□□□□ 0.43
TMEM53-201ENST00000372235 RAPH1Q70E73 1250 aa17.74■□□□□ 0.43
TMEM53-201ENST00000372235 BEST3Q8N1M1 668 aa17.74■□□□□ 0.43
TMEM53-201ENST00000372235 CCT6BQ92526 530 aa17.74■□□□□ 0.43
TMEM53-201ENST00000372235 RBCK1Q9BYM8 510 aa17.74■□□□□ 0.43
TMEM53-201ENST00000372235 CPAMD8Q8IZJ3 1885 aa17.73■□□□□ 0.43
TMEM53-201ENST00000372235 TCRBV16S1A1N1A0A5B0 115 aa17.73■□□□□ 0.43
TMEM53-201ENST00000372235 LRIT2A6NDA9 550 aa17.73■□□□□ 0.43
TMEM53-201ENST00000372235 SAGE2PA6NJ88 616 aa17.73■□□□□ 0.43
TMEM53-201ENST00000372235 CXorf49A8MYA2 514 aaPredicted RBP17.73■□□□□ 0.43
TMEM53-201ENST00000372235 FCHO1O14526 889 aa17.73■□□□□ 0.43
TMEM53-201ENST00000372235 FANCGO15287 622 aa17.73■□□□□ 0.43
TMEM53-201ENST00000372235 LRRTM2O43300 516 aa17.73■□□□□ 0.43
TMEM53-201ENST00000372235 B3GALT2O43825 422 aa17.73■□□□□ 0.43
TMEM53-201ENST00000372235 EEF1DP29692 281 aaKnown RBP17.73■□□□□ 0.43
TMEM53-201ENST00000372235 SERPINB1P30740 379 aa17.73■□□□□ 0.43
TMEM53-201ENST00000372235 GDF5P43026 501 aa17.73■□□□□ 0.43
TMEM53-201ENST00000372235 CASP6P55212 293 aa17.73■□□□□ 0.43
TMEM53-201ENST00000372235 HSD17B7P56937 341 aa17.73■□□□□ 0.43
TMEM53-201ENST00000372235 BTN3A2P78410 334 aa17.73■□□□□ 0.43
TMEM53-201ENST00000372235 TBCCQ15814 346 aa17.73■□□□□ 0.43
TMEM53-201ENST00000372235 KBTBD12Q3ZCT8 623 aa17.73■□□□□ 0.43
TMEM53-201ENST00000372235 GFRALQ6UXV0 394 aa17.73■□□□□ 0.43
TMEM53-201ENST00000372235 SYT10Q6XYQ8 523 aa17.73■□□□□ 0.43
TMEM53-201ENST00000372235 LRRC70Q7Z2Q7 622 aa17.73■□□□□ 0.43
TMEM53-201ENST00000372235 CCDC25Q86WR0 208 aa17.73■□□□□ 0.43
TMEM53-201ENST00000372235 RPS19BP1Q86WX3 136 aaKnown RBP17.73■□□□□ 0.43
TMEM53-201ENST00000372235 CRLF3Q8IUI8 442 aa17.73■□□□□ 0.43
TMEM53-201ENST00000372235 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.73■□□□□ 0.43
TMEM53-201ENST00000372235 SNX31Q8N9S9 440 aa17.73■□□□□ 0.43
TMEM53-201ENST00000372235 FBXO25Q8TCJ0 367 aa17.73■□□□□ 0.43
TMEM53-201ENST00000372235 ELP5Q8TE02 316 aa17.73■□□□□ 0.43
TMEM53-201ENST00000372235 TSLPQ969D9 159 aa17.73■□□□□ 0.43
TMEM53-201ENST00000372235 WDR34Q96EX3 536 aa17.73■□□□□ 0.43
TMEM53-201ENST00000372235 REXO4Q9GZR2 422 aaKnown RBP17.73■□□□□ 0.43
TMEM53-201ENST00000372235 TSPYL1Q9H0U9 437 aa17.73■□□□□ 0.43
TMEM53-201ENST00000372235 COPS7BQ9H9Q2 264 aaPredicted RBP17.73■□□□□ 0.43
TMEM53-201ENST00000372235 CAB39LQ9H9S4 337 aa17.73■□□□□ 0.43
TMEM53-201ENST00000372235 PTBP2Q9UKA9 531 aaKnown RBP17.73■□□□□ 0.43
TMEM53-201ENST00000372235 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.73■□□□□ 0.43
TMEM53-201ENST00000372235 LRRK2Q5S007 2527 aa17.72■□□□□ 0.43
TMEM53-201ENST00000372235 OR2W5A6NFC9 320 aa17.72■□□□□ 0.43
TMEM53-201ENST00000372235 SYCE1LA8MT33 242 aa17.72■□□□□ 0.43
TMEM53-201ENST00000372235 PHGDHO43175 533 aaKnown RBP17.72■□□□□ 0.43
TMEM53-201ENST00000372235 ERI3O43414 337 aaKnown RBP17.72■□□□□ 0.43
TMEM53-201ENST00000372235 PHBP35232 272 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms