RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 ZDHHC1Q8WTX9 485 aa16.72■□□□□ 0.27
SSBP3-203ENST00000371319 CANT1Q8WVQ1 401 aa16.72■□□□□ 0.27
SSBP3-203ENST00000371319 PPCDCQ96CD2 204 aa16.72■□□□□ 0.27
SSBP3-203ENST00000371319 SPACA7Q96KW9 195 aa16.72■□□□□ 0.27
SSBP3-203ENST00000371319 HSPA12BQ96MM6 686 aa16.72■□□□□ 0.27
SSBP3-203ENST00000371319 QRFPRQ96P65 431 aa16.72■□□□□ 0.27
SSBP3-203ENST00000371319 RPF2Q9H7B2 306 aaKnown RBP16.72■□□□□ 0.27
SSBP3-203ENST00000371319 CCM2LQ9NUG4 571 aaPredicted RBP16.72■□□□□ 0.27
SSBP3-203ENST00000371319 TDRD6O60522 2096 aaKnown RBP16.72■□□□□ 0.27
SSBP3-203ENST00000371319 FAM221BA6H8Z2 402 aa16.72■□□□□ 0.27
SSBP3-203ENST00000371319 C4orf51C9J302 202 aa16.72■□□□□ 0.27
SSBP3-203ENST00000371319 TNFSF14O43557 240 aa16.72■□□□□ 0.27
SSBP3-203ENST00000371319 TMPRSS11DO60235 418 aa16.72■□□□□ 0.27
SSBP3-203ENST00000371319 NME1P15531 152 aaKnown RBP16.72■□□□□ 0.27
SSBP3-203ENST00000371319 MAPK12P53778 367 aa16.72■□□□□ 0.27
SSBP3-203ENST00000371319 KLC1Q07866 573 aa16.72■□□□□ 0.27
SSBP3-203ENST00000371319 TRIP10Q15642 601 aa16.72■□□□□ 0.27
SSBP3-203ENST00000371319 AASDHQ4L235 1098 aaPredicted RBP16.72■□□□□ 0.27
SSBP3-203ENST00000371319 TMEM35AQ53FP2 167 aa16.72■□□□□ 0.27
SSBP3-203ENST00000371319 OR4C11Q6IEV9 310 aa16.72■□□□□ 0.27
SSBP3-203ENST00000371319 ZNF551Q7Z340 670 aaPredicted RBP16.72■□□□□ 0.27
SSBP3-203ENST00000371319 NUDT13Q86X67 352 aa16.72■□□□□ 0.27
SSBP3-203ENST00000371319 TMEM126BQ8IUX1 230 aa16.72■□□□□ 0.27
SSBP3-203ENST00000371319 MICU2Q8IYU8 434 aa16.72■□□□□ 0.27
SSBP3-203ENST00000371319 AMER3Q8N944 861 aa16.72■□□□□ 0.27
SSBP3-203ENST00000371319 DNAJC9Q8WXX5 260 aa16.72■□□□□ 0.27
SSBP3-203ENST00000371319 TEFMQ96QE5 360 aaKnown RBP16.72■□□□□ 0.27
SSBP3-203ENST00000371319 MACROD1Q9BQ69 325 aa16.72■□□□□ 0.27
SSBP3-203ENST00000371319 CENPKQ9BS16 269 aa16.72■□□□□ 0.27
SSBP3-203ENST00000371319 MIR1-1HGQ9H1L0 117 aa16.72■□□□□ 0.27
SSBP3-203ENST00000371319 DDX31Q9H8H2 851 aaKnown RBP16.72■□□□□ 0.27
SSBP3-203ENST00000371319 ATAD3AQ9NVI7 634 aa16.72■□□□□ 0.27
SSBP3-203ENST00000371319 ARMC1Q9NVT9 282 aa16.72■□□□□ 0.27
SSBP3-203ENST00000371319 MDC1Q14676 2089 aaKnown RBP16.71■□□□□ 0.27
SSBP3-203ENST00000371319 A0A0A6YYD5 115 aa16.71■□□□□ 0.27
SSBP3-203ENST00000371319 DHRS12A0PJE2 317 aa16.71■□□□□ 0.27
SSBP3-203ENST00000371319 C1orf226A1L170 272 aa16.71■□□□□ 0.27
SSBP3-203ENST00000371319 OR2A25A4D2G3 310 aa16.71■□□□□ 0.27
SSBP3-203ENST00000371319 PPM1DO15297 605 aa16.71■□□□□ 0.27
SSBP3-203ENST00000371319 ZW10O43264 779 aa16.71■□□□□ 0.27
SSBP3-203ENST00000371319 GPR37L1O60883 481 aa16.71■□□□□ 0.27
SSBP3-203ENST00000371319 CAPNS1P04632 268 aa16.71■□□□□ 0.27
SSBP3-203ENST00000371319 ZCCHC18P0CG32 403 aa16.71■□□□□ 0.27
SSBP3-203ENST00000371319 ENGP17813 658 aa16.71■□□□□ 0.27
SSBP3-203ENST00000371319 LRRC74AQ0VAA2 488 aa16.71■□□□□ 0.27
SSBP3-203ENST00000371319 TOR1AIP1Q5JTV8 583 aa16.71■□□□□ 0.27
SSBP3-203ENST00000371319 FCRL6Q6DN72 434 aa16.71■□□□□ 0.27
SSBP3-203ENST00000371319 ZNF793Q6ZN11 406 aa16.71■□□□□ 0.27
SSBP3-203ENST00000371319 ZNF621Q6ZSS3 439 aa16.71■□□□□ 0.27
SSBP3-203ENST00000371319 FAM46DQ8NEK8 389 aa16.71■□□□□ 0.27
SSBP3-203ENST00000371319 TRPV3Q8NET8 790 aa16.71■□□□□ 0.27
SSBP3-203ENST00000371319 VPS37AQ8NEZ2 397 aa16.71■□□□□ 0.27
SSBP3-203ENST00000371319 OR10G6Q8NH81 332 aa16.71■□□□□ 0.27
SSBP3-203ENST00000371319 GOT1L1Q8NHS2 421 aaPredicted RBP16.71■□□□□ 0.27
SSBP3-203ENST00000371319 CIDECQ96AQ7 238 aaPredicted RBP16.71■□□□□ 0.27
SSBP3-203ENST00000371319 MS4A6EQ96DS6 147 aa16.71■□□□□ 0.27
SSBP3-203ENST00000371319 IER2Q9BTL4 223 aa16.71■□□□□ 0.27
SSBP3-203ENST00000371319 TBCDQ9BTW9 1192 aa16.71■□□□□ 0.27
SSBP3-203ENST00000371319 DLGAP2Q9P1A6 1054 aa16.71■□□□□ 0.27
SSBP3-203ENST00000371319 THEGQ9P2T0 379 aa16.71■□□□□ 0.27
SSBP3-203ENST00000371319 SPASTQ9UBP0 616 aa16.71■□□□□ 0.27
SSBP3-203ENST00000371319 WBP11Q9Y2W2 641 aaKnown RBP16.71■□□□□ 0.27
SSBP3-203ENST00000371319 TP53BP1Q12888 1972 aaPredicted RBP16.71■□□□□ 0.27
SSBP3-203ENST00000371319 ARHGAP10A1A4S6 786 aa16.7■□□□□ 0.26
SSBP3-203ENST00000371319 ELOVL7A1L3X0 281 aa16.7■□□□□ 0.26
SSBP3-203ENST00000371319 GSAPA4D1B5 854 aa16.7■□□□□ 0.26
SSBP3-203ENST00000371319 CLIC1O00299 241 aa16.7■□□□□ 0.26
SSBP3-203ENST00000371319 TBX19O60806 448 aa16.7■□□□□ 0.26
SSBP3-203ENST00000371319 EPN2O95208 641 aa16.7■□□□□ 0.26
SSBP3-203ENST00000371319 GPIP06744 558 aa16.7■□□□□ 0.26
SSBP3-203ENST00000371319 GSTM5P46439 218 aa16.7■□□□□ 0.26
SSBP3-203ENST00000371319 PLA2G16P53816 162 aa16.7■□□□□ 0.26
SSBP3-203ENST00000371319 POLE2P56282 527 aa16.7■□□□□ 0.26
SSBP3-203ENST00000371319 NXPH1P58417 271 aa16.7■□□□□ 0.26
SSBP3-203ENST00000371319 RPS15AP62244 130 aaKnown RBP16.7■□□□□ 0.26
SSBP3-203ENST00000371319 TRA2BP62995 288 aaKnown RBP16.7■□□□□ 0.26
SSBP3-203ENST00000371319 ABHD18Q0P651 414 aa16.7■□□□□ 0.26
SSBP3-203ENST00000371319 GAB1Q13480 694 aa16.7■□□□□ 0.26
SSBP3-203ENST00000371319 TAF11Q15544 211 aa16.7■□□□□ 0.26
SSBP3-203ENST00000371319 SLC5A12Q1EHB4 618 aa16.7■□□□□ 0.26
SSBP3-203ENST00000371319 HMBOX1Q6NT76 420 aa16.7■□□□□ 0.26
SSBP3-203ENST00000371319 FBXO42Q6P3S6 717 aa16.7■□□□□ 0.26
SSBP3-203ENST00000371319 TMEM26Q6ZUK4 368 aa16.7■□□□□ 0.26
SSBP3-203ENST00000371319 VN1R4Q7Z5H5 301 aa16.7■□□□□ 0.26
SSBP3-203ENST00000371319 TICAM1Q8IUC6 712 aa16.7■□□□□ 0.26
SSBP3-203ENST00000371319 FAM47BQ8NA70 645 aa16.7■□□□□ 0.26
SSBP3-203ENST00000371319 TNIP2Q8NFZ5 429 aa16.7■□□□□ 0.26
SSBP3-203ENST00000371319 OR4A15Q8NGL6 344 aa16.7■□□□□ 0.26
SSBP3-203ENST00000371319 LRTOMTQ8WZ04 291 aa16.7■□□□□ 0.26
SSBP3-203ENST00000371319 FAM120BQ96EK7 910 aaKnown RBP16.7■□□□□ 0.26
SSBP3-203ENST00000371319 NSMCE2Q96MF7 247 aa16.7■□□□□ 0.26
SSBP3-203ENST00000371319 ZNF570Q96NI8 536 aa16.7■□□□□ 0.26
SSBP3-203ENST00000371319 KLHL4Q9C0H6 718 aa16.7■□□□□ 0.26
SSBP3-203ENST00000371319 ANKMY1Q9P2S6 941 aa16.7■□□□□ 0.26
SSBP3-203ENST00000371319 PCDHGA2Q9Y5H1 932 aa16.7■□□□□ 0.26
SSBP3-203ENST00000371319 KLK4Q9Y5K2 254 aa16.7■□□□□ 0.26
SSBP3-203ENST00000371319 ENTPD2Q9Y5L3 495 aa16.7■□□□□ 0.26
SSBP3-203ENST00000371319 GMEB1Q9Y692 573 aa16.7■□□□□ 0.26
SSBP3-203ENST00000371319 TRIOO75962 3097 aa16.7■□□□□ 0.26
SSBP3-203ENST00000371319 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms