RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 GDPD4Q6W3E5 623 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 METTL4Q8N3J2 472 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 PLA2G15Q8NCC3 412 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 LRTOMTQ8WZ04 291 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 MAGEB10Q96LZ2 347 aaPredicted RBP6.6□□□□□ -1.35
CSDE1-204ENST00000369530 C9orf16Q9BUW7 83 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 CCDC32Q9BV29 185 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 GTPBP2Q9BX10 602 aaKnown RBP6.6□□□□□ -1.35
CSDE1-204ENST00000369530 SNX15Q9NRS6 342 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 MED9Q9NWA0 146 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 MAT2BQ9NZL9 334 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 BFARQ9NZS9 450 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 ZNF229Q9UJW7 825 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 ANKRD6Q9Y2G4 727 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 TNPO3Q9Y5L0 923 aaKnown RBP6.6□□□□□ -1.35
CSDE1-204ENST00000369530 PMPCBO75439 489 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 SUPT7LO94864 414 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 KCNH1O95259 989 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 HTR1AP08908 422 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 GFAPP14136 432 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 ATF4P18848 351 aaPredicted RBP6.6□□□□□ -1.35
CSDE1-204ENST00000369530 CRHBPP24387 322 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 MGAT1P26572 445 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 HLA-DMAP28067 261 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 GZMKP49863 264 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 PRPSAP1Q14558 356 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 KIF19Q2TAC6 998 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 ZMAT1Q5H9K5 638 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 CATSPEREQ5SY80 951 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 NAPEPLDQ6IQ20 393 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 CYS1Q717R9 158 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 TSPYL5Q86VY4 417 aaPredicted RBP6.6□□□□□ -1.35
CSDE1-204ENST00000369530 KLHDC8AQ8IYD2 350 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 ATPAF2Q8N5M1 289 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 IPMKQ8NFU5 416 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 SLC7A6Q92536 515 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 RDH12Q96NR8 316 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 SPON2Q9BUD6 331 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 SHARPINQ9H0F6 387 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 KCTD5Q9NXV2 234 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 SLC6A14Q9UN76 642 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 CDYLQ9Y232 598 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 KCNK7Q9Y2U2 307 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 TCRBV9S1A1TA0A576 114 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 NPIPB15A6NHN6 443 aaPredicted RBP6.6□□□□□ -1.35
CSDE1-204ENST00000369530 LRRC72A6NJI9 287 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 TNFRSF10CO14798 259 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 TSPAN6O43657 245 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 C1QBP02746 253 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 JUNDP17535 347 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 MX2P20592 715 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 PTPN3P26045 913 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 SLC12A2P55011 1212 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 GP2P55259 537 aaKnown RBP6.6□□□□□ -1.35
CSDE1-204ENST00000369530 YPEL5P62699 121 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 FAPQ12884 760 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 OLIG2Q13516 323 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 GALEQ14376 348 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 PUM1Q14671 1186 aaKnown RBP eCLIP6.6□□□□□ -1.357e-7■■□□□ 11.5
CSDE1-204ENST00000369530 WSCD2Q2TBF2 565 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 SEL1L3Q68CR1 1132 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 ZBTB49Q6ZSB9 765 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 PIWIL3Q7Z3Z3 882 aaKnown RBP6.6□□□□□ -1.35
CSDE1-204ENST00000369530 RABEPKQ7Z6M1 372 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 GALNT10Q86SR1 603 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 KIF18BQ86Y91 864 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 NRSN1Q8IZ57 195 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 ZNF781Q8N8C0 355 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 OR4C6Q8NH72 309 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 ISL2Q96A47 359 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 ZNF669Q96BR6 464 aaPredicted RBP6.6□□□□□ -1.35
CSDE1-204ENST00000369530 DTD2Q96FN9 168 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 GPR137Q96N19 417 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 SLC6A18Q96N87 628 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 LGR4Q9BXB1 951 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 CHRNA10Q9GZZ6 450 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 MSRB2Q9Y3D2 182 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 GVINP1Q7Z2Y8 2422 aa6.59□□□□□ -1.35
CSDE1-204ENST00000369530 K7ESM1 405 aa6.59□□□□□ -1.35
CSDE1-204ENST00000369530 PRICKLE3O43900 615 aaPredicted RBP6.59□□□□□ -1.35
CSDE1-204ENST00000369530 SYNCRIPO60506 623 aaKnown RBP6.59□□□□□ -1.35
CSDE1-204ENST00000369530 SEMA4FO95754 770 aa6.59□□□□□ -1.35
CSDE1-204ENST00000369530 C9P02748 559 aa6.59□□□□□ -1.35
CSDE1-204ENST00000369530 ST13P50502 369 aaKnown RBP6.59□□□□□ -1.35
CSDE1-204ENST00000369530 OR2B6P58173 313 aa6.59□□□□□ -1.35
CSDE1-204ENST00000369530 MRPL28Q13084 256 aaKnown RBP6.59□□□□□ -1.35
CSDE1-204ENST00000369530 STARD3Q14849 445 aa6.59□□□□□ -1.35
CSDE1-204ENST00000369530 DPY19L1Q2PZI1 675 aa6.59□□□□□ -1.35
CSDE1-204ENST00000369530 PRMT9Q6P2P2 845 aa6.59□□□□□ -1.35
CSDE1-204ENST00000369530 CRTC1Q6UUV9 634 aa6.59□□□□□ -1.35
CSDE1-204ENST00000369530 IGDCC3Q8IVU1 814 aa6.59□□□□□ -1.35
CSDE1-204ENST00000369530 SLITRK4Q8IW52 837 aa6.59□□□□□ -1.35
CSDE1-204ENST00000369530 YAF2Q8IY57 180 aa6.59□□□□□ -1.35
CSDE1-204ENST00000369530 VANGL1Q8TAA9 524 aaPredicted RBP6.59□□□□□ -1.35
CSDE1-204ENST00000369530 SLC9A6Q92581 669 aa6.59□□□□□ -1.35
CSDE1-204ENST00000369530 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.59□□□□□ -1.354e-6■■□□□ 14.1
CSDE1-204ENST00000369530 ATP6V1E2Q96A05 226 aa6.59□□□□□ -1.35
CSDE1-204ENST00000369530 TEKT5Q96M29 485 aa6.59□□□□□ -1.35
CSDE1-204ENST00000369530 SPATA13Q96N96 652 aa6.59□□□□□ -1.35
CSDE1-204ENST00000369530 RILPQ96NA2 401 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms