RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 TBCCQ15814 346 aa17.85■□□□□ 0.45
CKS1B-203ENST00000368439 ADPRMQ3LIE5 342 aa17.85■□□□□ 0.45
CKS1B-203ENST00000368439 XKR6Q5GH73 641 aa17.85■□□□□ 0.45
CKS1B-203ENST00000368439 MFSD4BQ5TF39 518 aa17.85■□□□□ 0.45
CKS1B-203ENST00000368439 ISLR2Q6UXK2 745 aa17.85■□□□□ 0.45
CKS1B-203ENST00000368439 RIPOR1Q6ZS17 1223 aa17.85■□□□□ 0.45
CKS1B-203ENST00000368439 CUZD1Q86UP6 607 aa17.85■□□□□ 0.45
CKS1B-203ENST00000368439 KRT78Q8N1N4 520 aa17.85■□□□□ 0.45
CKS1B-203ENST00000368439 PLD6Q8N2A8 252 aaKnown RBP17.85■□□□□ 0.45
CKS1B-203ENST00000368439 SNX31Q8N9S9 440 aa17.85■□□□□ 0.45
CKS1B-203ENST00000368439 LRRN4CLQ8ND94 238 aa17.85■□□□□ 0.45
CKS1B-203ENST00000368439 BRIX1Q8TDN6 353 aaKnown RBP17.85■□□□□ 0.45
CKS1B-203ENST00000368439 PPP4R1Q8TF05 950 aa17.85■□□□□ 0.45
CKS1B-203ENST00000368439 DCAKDQ8WVC6 231 aa17.85■□□□□ 0.45
CKS1B-203ENST00000368439 METTL21AQ8WXB1 218 aa17.85■□□□□ 0.45
CKS1B-203ENST00000368439 TBC1D20Q96BZ9 403 aa17.85■□□□□ 0.45
CKS1B-203ENST00000368439 MS4A6EQ96DS6 147 aa17.85■□□□□ 0.45
CKS1B-203ENST00000368439 LMF1Q96S06 567 aa17.85■□□□□ 0.45
CKS1B-203ENST00000368439 PAFAH2Q99487 392 aa17.85■□□□□ 0.45
CKS1B-203ENST00000368439 TUBB6Q9BUF5 446 aa17.85■□□□□ 0.45
CKS1B-203ENST00000368439 RHBGQ9H310 441 aa17.85■□□□□ 0.45
CKS1B-203ENST00000368439 SLAMF7Q9NQ25 335 aa17.85■□□□□ 0.45
CKS1B-203ENST00000368439 ASH1LQ9NR48 2969 aaKnown RBP17.85■□□□□ 0.45
CKS1B-203ENST00000368439 LRIT2A6NDA9 550 aa17.84■□□□□ 0.45
CKS1B-203ENST00000368439 MAGEB17A8MXT2 336 aa17.84■□□□□ 0.45
CKS1B-203ENST00000368439 CLEC3AO75596 197 aa17.84■□□□□ 0.45
CKS1B-203ENST00000368439 CDC123O75794 336 aaPredicted RBP17.84■□□□□ 0.45
CKS1B-203ENST00000368439 ITGAMP11215 1152 aa17.84■□□□□ 0.45
CKS1B-203ENST00000368439 TYK2P29597 1187 aa17.84■□□□□ 0.45
CKS1B-203ENST00000368439 GLRBP48167 497 aa17.84■□□□□ 0.45
CKS1B-203ENST00000368439 SKP1P63208 163 aa17.84■□□□□ 0.45
CKS1B-203ENST00000368439 CHIT1Q13231 466 aa17.84■□□□□ 0.45
CKS1B-203ENST00000368439 MFAP5Q13361 173 aa17.84■□□□□ 0.45
CKS1B-203ENST00000368439 FAM83EQ2M2I3 478 aa17.84■□□□□ 0.45
CKS1B-203ENST00000368439 IRAK1BP1Q5VVH5 260 aa17.84■□□□□ 0.45
CKS1B-203ENST00000368439 CA13Q8N1Q1 262 aa17.84■□□□□ 0.45
CKS1B-203ENST00000368439 TSLPQ969D9 159 aa17.84■□□□□ 0.45
CKS1B-203ENST00000368439 GAL3ST3Q96A11 431 aa17.84■□□□□ 0.45
CKS1B-203ENST00000368439 QRFPRQ96P65 431 aa17.84■□□□□ 0.45
CKS1B-203ENST00000368439 EFCAB11Q9BUY7 163 aa17.84■□□□□ 0.45
CKS1B-203ENST00000368439 CLEC18AA5D8T8 446 aa17.83■□□□□ 0.44
CKS1B-203ENST00000368439 K7EPI3 171 aa17.83■□□□□ 0.44
CKS1B-203ENST00000368439 SEC24DO94855 1032 aaPredicted RBP17.83■□□□□ 0.44
CKS1B-203ENST00000368439 INHBAP08476 426 aa17.83■□□□□ 0.44
CKS1B-203ENST00000368439 STXBP1P61764 594 aaKnown RBP17.83■□□□□ 0.44
CKS1B-203ENST00000368439 SETDB1Q15047 1291 aa17.83■□□□□ 0.44
CKS1B-203ENST00000368439 CLEC18BQ6UXF7 455 aa17.83■□□□□ 0.44
CKS1B-203ENST00000368439 LINC00696Q6ZRV3 163 aa17.83■□□□□ 0.44
CKS1B-203ENST00000368439 IFT20Q8IY31 132 aa17.83■□□□□ 0.44
CKS1B-203ENST00000368439 SIRT6Q8N6T7 355 aa17.83■□□□□ 0.44
CKS1B-203ENST00000368439 CLEC18CQ8NCF0 446 aa17.83■□□□□ 0.44
CKS1B-203ENST00000368439 UHMK1Q8TAS1 419 aaKnown RBP17.83■□□□□ 0.44
CKS1B-203ENST00000368439 SNRNP40Q96DI7 357 aaKnown RBP17.83■□□□□ 0.44
CKS1B-203ENST00000368439 C19orf60Q96EN9 201 aa17.83■□□□□ 0.44
CKS1B-203ENST00000368439 ZNF358Q9NW07 568 aa17.83■□□□□ 0.44
CKS1B-203ENST00000368439 PTGFRNQ9P2B2 879 aa17.83■□□□□ 0.44
CKS1B-203ENST00000368439 C19orf25Q9UFG5 118 aaPredicted RBP17.83■□□□□ 0.44
CKS1B-203ENST00000368439 ZNF180Q9UJW8 692 aa17.83■□□□□ 0.44
CKS1B-203ENST00000368439 PCDHGA10Q9Y5H3 936 aa17.83■□□□□ 0.44
CKS1B-203ENST00000368439 A0A087WUV0 522 aaPredicted RBP17.82■□□□□ 0.44
CKS1B-203ENST00000368439 SYCE1LA8MT33 242 aa17.82■□□□□ 0.44
CKS1B-203ENST00000368439 ICAM2P13598 275 aa17.82■□□□□ 0.44
CKS1B-203ENST00000368439 GCAP28676 217 aa17.82■□□□□ 0.44
CKS1B-203ENST00000368439 SERPINB9P50453 376 aa17.82■□□□□ 0.44
CKS1B-203ENST00000368439 BTN3A2P78410 334 aa17.82■□□□□ 0.44
CKS1B-203ENST00000368439 BTG2P78543 158 aa17.82■□□□□ 0.44
CKS1B-203ENST00000368439 IRF8Q02556 426 aa17.82■□□□□ 0.44
CKS1B-203ENST00000368439 SRSF1Q07955 248 aaKnown RBP eCLIP17.82■□□□□ 0.44
CKS1B-203ENST00000368439 LAPTM5Q13571 262 aa17.82■□□□□ 0.44
CKS1B-203ENST00000368439 RUNX2Q13950 521 aa17.82■□□□□ 0.44
CKS1B-203ENST00000368439 NAA30Q147X3 362 aaPredicted RBP17.82■□□□□ 0.44
CKS1B-203ENST00000368439 ABRAXAS2Q15018 415 aa17.82■□□□□ 0.44
CKS1B-203ENST00000368439 NSDHLQ15738 373 aa17.82■□□□□ 0.44
CKS1B-203ENST00000368439 TECRLQ5HYJ1 363 aa17.82■□□□□ 0.44
CKS1B-203ENST00000368439 PLAG1Q6DJT9 500 aa17.82■□□□□ 0.44
CKS1B-203ENST00000368439 IQCKQ8N0W5 287 aa17.82■□□□□ 0.44
CKS1B-203ENST00000368439 GALNT11Q8NCW6 608 aa17.82■□□□□ 0.44
CKS1B-203ENST00000368439 TXLNGYQ9BZA5 131 aa17.82■□□□□ 0.44
CKS1B-203ENST00000368439 ILKAPQ9H0C8 392 aaPredicted RBP17.82■□□□□ 0.44
CKS1B-203ENST00000368439 VPS11Q9H270 941 aa17.82■□□□□ 0.44
CKS1B-203ENST00000368439 EPS8L2Q9H6S3 715 aa17.82■□□□□ 0.44
CKS1B-203ENST00000368439 OPTCQ9UBM4 332 aa17.82■□□□□ 0.44
CKS1B-203ENST00000368439 RP1L1Q8IWN7 2480 aaPredicted RBP17.81■□□□□ 0.44
CKS1B-203ENST00000368439 IGKV3D-11A0A0A0MRZ8 115 aa17.81■□□□□ 0.44
CKS1B-203ENST00000368439 A0A0G2JN53 185 aa17.81■□□□□ 0.44
CKS1B-203ENST00000368439 ANKDD1BA6NHY2 528 aa17.81■□□□□ 0.44
CKS1B-203ENST00000368439 LRRC14BA6NHZ5 514 aa17.81■□□□□ 0.44
CKS1B-203ENST00000368439 FAM227AF5H4B4 570 aa17.81■□□□□ 0.44
CKS1B-203ENST00000368439 POC1B-GALNT4F8VUJ3 575 aa17.81■□□□□ 0.44
CKS1B-203ENST00000368439 ERI3O43414 337 aaKnown RBP17.81■□□□□ 0.44
CKS1B-203ENST00000368439 B4GALT2O60909 372 aa17.81■□□□□ 0.44
CKS1B-203ENST00000368439 ABHD2P08910 425 aa17.81■□□□□ 0.44
CKS1B-203ENST00000368439 FAM153BP0C7A2 387 aa17.81■□□□□ 0.44
CKS1B-203ENST00000368439 RHOXF2BP0C7M4 288 aa17.81■□□□□ 0.44
CKS1B-203ENST00000368439 RNH1P13489 461 aaKnown RBP17.81■□□□□ 0.44
CKS1B-203ENST00000368439 JAK1P23458 1154 aa17.81■□□□□ 0.44
CKS1B-203ENST00000368439 MSH2P43246 934 aa17.81■□□□□ 0.44
CKS1B-203ENST00000368439 UQCRFS1P47985 274 aa17.81■□□□□ 0.44
CKS1B-203ENST00000368439 PCBP2Q15366 365 aaKnown RBP eCLIP17.81■□□□□ 0.44
CKS1B-203ENST00000368439 FAM153CQ494X1 144 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms