RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 NUP62P37198 522 aaPredicted RBP11.27□□□□□ -0.61
COPA-202ENST00000368069 SMSP52788 366 aa11.27□□□□□ -0.61
COPA-202ENST00000368069 PSMD4P55036 377 aaKnown RBP11.27□□□□□ -0.61
COPA-202ENST00000368069 E2F2Q14209 437 aa11.27□□□□□ -0.61
COPA-202ENST00000368069 XKR4Q5GH76 650 aa11.27□□□□□ -0.61
COPA-202ENST00000368069 PRRC2BQ5JSZ5 2229 aaKnown RBP11.27□□□□□ -0.61
COPA-202ENST00000368069 TUBA3EQ6PEY2 450 aa11.27□□□□□ -0.61
COPA-202ENST00000368069 PGBD5Q8N414 524 aa11.27□□□□□ -0.61
COPA-202ENST00000368069 CDK5RAP2Q96SN8 1893 aa11.27□□□□□ -0.61
COPA-202ENST00000368069 MMP27Q9H306 513 aa11.27□□□□□ -0.61
COPA-202ENST00000368069 EDDM13A0A1B0GTR0 161 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 KLHL33A6NCF5 533 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 FAM170BA6NMN3 283 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 AXIN1O15169 862 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 CDRT1O95170 752 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 LAMP1P11279 417 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 ZXDBP98169 803 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 TMEM44Q2T9K0 475 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 SLC36A3Q495N2 470 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 OTUD1Q5VV17 481 aaPredicted RBP11.26□□□□□ -0.61
COPA-202ENST00000368069 SLC15A4Q8N697 577 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 SLC22A4Q9H015 551 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 NME7Q9Y5B8 376 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 DAPL1A0PJW8 107 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 MUSKO15146 869 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 SMAD6O43541 496 aaKnown RBP11.26□□□□□ -0.61
COPA-202ENST00000368069 SLC25A12O75746 678 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 CH25HO95992 272 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 RETP07949 1114 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 SPINT3P49223 89 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 TBPL1P62380 186 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 ZNF805Q5CZA5 627 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 OAFQ86UD1 273 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 MARCH9Q86YJ5 346 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 KLHL36Q8N4N3 616 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 OR4C6Q8NH72 309 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 TMEM45AQ9NWC5 275 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 IKZF2Q9UKS7 526 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 ACSL6Q9UKU0 697 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 ACOT8O14734 319 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 B3GALT2O43825 422 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 PPIGQ13427 754 aaKnown RBP eCLIP11.26□□□□□ -0.614e-7■■■□□ 15.2
COPA-202ENST00000368069 GRASPQ7Z6J2 395 aaPredicted RBP11.26□□□□□ -0.61
COPA-202ENST00000368069 HUS1BQ8NHY5 278 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 PROKR1Q8TCW9 393 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 GPR151Q8TDV0 419 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 TMEM80Q96HE8 168 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 SLC30A2Q9BRI3 323 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 HEBP1Q9NRV9 189 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 MKLN1Q9UL63 735 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 EVPLQ92817 2033 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 GRXCR2A6NFK2 248 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 NPIPB15A6NHN6 443 aaPredicted RBP11.26□□□□□ -0.61
COPA-202ENST00000368069 TMEM189-UBE2V1I3L0A0 370 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 SCAMP2O15127 329 aaKnown RBP11.26□□□□□ -0.61
COPA-202ENST00000368069 GNRH1P01148 92 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 C8orf89P0DMQ9 161 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 PSKH1P11801 424 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 CDK4P11802 303 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 AGXTP21549 392 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 UQCRC2P22695 453 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 OMPP47874 163 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 RBBP4Q09028 425 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 ILF3Q12906 894 aaKnown RBP eCLIP11.26□□□□□ -0.612e-8■■■■■ 28.7
COPA-202ENST00000368069 LASP1Q14847 261 aaKnown RBP11.26□□□□□ -0.61
COPA-202ENST00000368069 CTSL3PQ5NE16 218 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 BORAQ6PGQ7 559 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 SAMD14Q8IZD0 417 aaPredicted RBP11.26□□□□□ -0.61
COPA-202ENST00000368069 SORCS1Q8WY21 1168 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 MAL2Q969L2 176 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 SCRN2Q96FV2 425 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 CITED4Q96RK1 184 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 BARD1Q99728 777 aaKnown RBP11.26□□□□□ -0.61
COPA-202ENST00000368069 PIP5K1AQ99755 562 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 SLC12A9Q9BXP2 914 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 MED28Q9H204 178 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 MGAT4BQ9UQ53 548 aa11.26□□□□□ -0.61
COPA-202ENST00000368069 SMIM30A4D0T7 59 aa11.25□□□□□ -0.61
COPA-202ENST00000368069 DUXAA6NLW8 204 aa11.25□□□□□ -0.61
COPA-202ENST00000368069 ARNTLO00327 626 aa11.25□□□□□ -0.61
COPA-202ENST00000368069 UBFD1O14562 309 aaKnown RBP11.25□□□□□ -0.61
COPA-202ENST00000368069 NDUFB5O43674 189 aa11.25□□□□□ -0.61
COPA-202ENST00000368069 SCN2BO60939 215 aa11.25□□□□□ -0.61
COPA-202ENST00000368069 STSP08842 583 aa11.25□□□□□ -0.61
COPA-202ENST00000368069 SLC10A3P09131 477 aa11.25□□□□□ -0.61
COPA-202ENST00000368069 ZNF8P17098 575 aaPredicted RBP11.25□□□□□ -0.61
COPA-202ENST00000368069 ITPKBP27987 946 aa11.25□□□□□ -0.61
COPA-202ENST00000368069 RAB8AP61006 207 aa11.25□□□□□ -0.61
COPA-202ENST00000368069 FADDQ13158 208 aa11.25□□□□□ -0.61
COPA-202ENST00000368069 PDGFRLQ15198 375 aa11.25□□□□□ -0.61
COPA-202ENST00000368069 EIPR1Q53HC9 387 aa11.25□□□□□ -0.61
COPA-202ENST00000368069 CARM1Q86X55 608 aa11.25□□□□□ -0.61
COPA-202ENST00000368069 CELF5Q8N6W0 485 aaKnown RBP11.25□□□□□ -0.61
COPA-202ENST00000368069 ZNF563Q8TA94 476 aa11.25□□□□□ -0.61
COPA-202ENST00000368069 SPHK2Q9NRA0 654 aa11.25□□□□□ -0.61
COPA-202ENST00000368069 GLOD5A6NK44 160 aa11.25□□□□□ -0.61
COPA-202ENST00000368069 H7BY64 318 aa11.25□□□□□ -0.61
COPA-202ENST00000368069 ORC5O43913 435 aa11.25□□□□□ -0.61
COPA-202ENST00000368069 ETFAP13804 333 aa11.25□□□□□ -0.61
COPA-202ENST00000368069 SLC5A2P31639 672 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms