RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 SNRPGP62308 76 aaKnown RBP7.03□□□□□ -1.28
VTA1-202ENST00000367630 MS4A2Q01362 244 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 GRB7Q14451 532 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 MED22Q15528 200 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 NXPE4Q6UWF7 544 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 DNAJC14Q6Y2X3 702 aaPredicted RBP7.03□□□□□ -1.28
VTA1-202ENST00000367630 EID2Q8N6I1 236 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 ZNF675Q8TD23 568 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 SCGB3A2Q96PL1 93 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 PKMYT1Q99640 499 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 SLC27A5Q9Y2P5 690 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 PCDHGC4Q9Y5F7 938 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 CITO14578 2027 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 TRBC2A0A5B9 178 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 HSPB2A8KAH6 182 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 TMEM233B4DJY2 109 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 CDK1P06493 297 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 FHP07954 510 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 CDH12P55289 794 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 MAD2L1BPQ15013 274 aaPredicted RBP7.03□□□□□ -1.28
VTA1-202ENST00000367630 HSPB2Q16082 182 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 PRAMEF19Q5SWL8 479 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 C8orf82Q6P1X6 216 aaPredicted RBP7.03□□□□□ -1.28
VTA1-202ENST00000367630 ZCCHC12Q6PEW1 402 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 CLDN22Q8N7P3 220 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 CCDC107Q8WV48 283 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 PTERQ96BW5 349 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 MUS81Q96NY9 551 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 ALPK1Q96QP1 1244 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 PITX2Q99697 317 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 MROQ9BYG7 248 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 ABCB10Q9NRK6 738 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 TRNAU1APQ9NX07 287 aaKnown RBP7.03□□□□□ -1.28
VTA1-202ENST00000367630 SLC17A6Q9P2U8 582 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 PLXNA1Q9UIW2 1896 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 A0A1W2PQ45 241 aaPredicted RBP7.03□□□□□ -1.28
VTA1-202ENST00000367630 A0A1W2PQY0 241 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 NEMP2A6NFY4 417 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 NBNO60934 754 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 TPPPO94811 219 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 MTHFD1P11586 935 aaKnown RBP7.03□□□□□ -1.28
VTA1-202ENST00000367630 BDH1Q02338 343 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 CDK5R2Q13319 367 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 USP51Q70EK9 711 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 ZNF550Q7Z398 422 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 MS4A15Q8N5U1 240 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 OR6Q1Q8NGQ2 317 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 RRAGCQ9HB90 399 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 PREBQ9HCU5 417 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 UBXN7O94888 489 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 SIX3O95343 332 aaPredicted RBP7.03□□□□□ -1.28
VTA1-202ENST00000367630 CDK4P11802 303 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 GSSP48637 474 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 PRLHRP49683 370 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 ERFP50548 548 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 ERVPABLB-1P60509 514 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 RPS15AP62244 130 aaKnown RBP7.03□□□□□ -1.28
VTA1-202ENST00000367630 GPR50Q13585 617 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 SLBPQ14493 270 aaKnown RBP eCLIP7.03□□□□□ -1.28
VTA1-202ENST00000367630 PLCL1Q15111 1095 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 SNAPC1Q16533 368 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 GPAT3Q53EU6 434 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 KHDRBS2Q5VWX1 349 aaKnown RBP7.03□□□□□ -1.28
VTA1-202ENST00000367630 TPRA1Q86W33 373 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 SPARTQ8N0X7 666 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 SLC34A3Q8N130 599 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 KREMEN2Q8NCW0 462 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 BTN2A2Q8WVV5 523 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 HOXD1Q9GZZ0 328 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 NMUR1Q9HB89 426 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 LHX3Q9UBR4 397 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 FCF1Q9Y324 198 aaKnown RBP7.03□□□□□ -1.28
VTA1-202ENST00000367630 PPIL1Q9Y3C6 166 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 VILLO15195 856 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 EMC8O43402 210 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 PDYNP01213 254 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 HIST1H2ABP04908 130 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 ZNF3P17036 446 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 AOAHP28039 575 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 CLCN7P51798 805 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 OR2B6P58173 313 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 PTSQ03393 145 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 HSF2Q03933 536 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 MLLT11Q13015 90 aaPredicted RBP7.03□□□□□ -1.28
VTA1-202ENST00000367630 KLHL26Q53HC5 615 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 ZNF57Q68EA5 555 aaPredicted RBP7.03□□□□□ -1.28
VTA1-202ENST00000367630 PSAPL1Q6NUJ1 521 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 TMEM220Q6QAJ8 160 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 HIST3H2AQ7L7L0 130 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 PIM3Q86V86 326 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 HIST1H2ACQ93077 130 aa7.03□□□□□ -1.28
VTA1-202ENST00000367630 MRPS23Q9Y3D9 190 aaKnown RBP7.03□□□□□ -1.28
VTA1-202ENST00000367630 CASKO14936 926 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 IFNA7P01567 189 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 IFI6P09912 130 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 GPX2P18283 190 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 GJA8P48165 433 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 BLKP51451 505 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 PHC1P78364 1004 aa7.02□□□□□ -1.29
VTA1-202ENST00000367630 FXNQ16595 210 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms