RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 TSTA3Q13630 321 aaPredicted RBP7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 GBX1Q14549 363 aa7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 NDUFA9Q16795 377 aa7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 ZNF750Q32MQ0 723 aa7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 FILIP1LQ4L180 1135 aa7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 PRSS57Q6UWY2 283 aa7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 CAPN12Q6ZSI9 719 aa7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 KIAA0408Q6ZU52 694 aa7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 SLC13A5Q86YT5 568 aaPredicted RBP7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 MAPK1IP1LQ8NDC0 245 aa7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 OR9A1PQ8NGU1 263 aa7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 CTNNBL1Q8WYA6 563 aaPredicted RBP7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 SMPDL3AQ92484 453 aa7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 FAM136AQ96C01 138 aa7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 TM4SF19Q96DZ7 209 aa7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 PERPQ96FX8 193 aa7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 PRAP1Q96NZ9 151 aa7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 PKP4Q99569 1192 aa7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 WDR83Q9BRX9 315 aaKnown RBP7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 SARGQ9BW04 601 aa7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 DEFB126Q9BYW3 111 aa7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 P2RY12Q9H244 342 aa7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 NECTIN3Q9NQS3 549 aa7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 ABCF3Q9NUQ8 709 aa7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 ALKBH4Q9NXW9 302 aa7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 DDX56Q9NY93 547 aaKnown RBP7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 SPATA7Q9P0W8 599 aa7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 ACAD8Q9UKU7 415 aa7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 DRG1Q9Y295 367 aaKnown RBP7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 CHD3Q12873 2000 aaKnown RBP7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 TRBV11-1A0A0K0K1C0 115 aa7.85□□□□□ -1.15
HMGB1P39-201ENST00000366304 A0A1W2PNR3 127 aa7.85□□□□□ -1.15
HMGB1P39-201ENST00000366304 CTAGE15A4D2H0 777 aa7.85□□□□□ -1.15
HMGB1P39-201ENST00000366304 E7ENX8 843 aa7.85□□□□□ -1.15
HMGB1P39-201ENST00000366304 TGFBR3LH3BV60 316 aa7.85□□□□□ -1.15
HMGB1P39-201ENST00000366304 TXNDC9O14530 226 aa7.85□□□□□ -1.15
HMGB1P39-201ENST00000366304 PHF1O43189 567 aaPredicted RBP7.85□□□□□ -1.15
HMGB1P39-201ENST00000366304 CHST10O43529 356 aa7.85□□□□□ -1.15
HMGB1P39-201ENST00000366304 LCMT2O60294 686 aaKnown RBP7.85□□□□□ -1.15
HMGB1P39-201ENST00000366304 B4GALT2O60909 372 aa7.85□□□□□ -1.15
HMGB1P39-201ENST00000366304 WDR1O75083 606 aa7.85□□□□□ -1.15
HMGB1P39-201ENST00000366304 SLC16A8O95907 504 aa7.85□□□□□ -1.15
HMGB1P39-201ENST00000366304 FHP07954 510 aa7.85□□□□□ -1.15
HMGB1P39-201ENST00000366304 RFPL3SP0C7P2 107 aa7.85□□□□□ -1.15
HMGB1P39-201ENST00000366304 TMEM253P0C7T8 217 aa7.85□□□□□ -1.15
HMGB1P39-201ENST00000366304 PKMP14618 531 aaKnown RBP7.85□□□□□ -1.15
HMGB1P39-201ENST00000366304 PPP2R1BP30154 601 aa7.85□□□□□ -1.15
HMGB1P39-201ENST00000366304 GPR143P51810 404 aa7.85□□□□□ -1.15
HMGB1P39-201ENST00000366304 PNLIPRP1P54315 467 aa7.85□□□□□ -1.15
HMGB1P39-201ENST00000366304 TAP2Q03519 686 aa7.85□□□□□ -1.15
HMGB1P39-201ENST00000366304 PRPSAP1Q14558 356 aa7.85□□□□□ -1.15
HMGB1P39-201ENST00000366304 KRTAP24-1Q3LI83 254 aa7.85□□□□□ -1.15
HMGB1P39-201ENST00000366304 CTSL3PQ5NE16 218 aa7.85□□□□□ -1.15
HMGB1P39-201ENST00000366304 BBS12Q6ZW61 710 aa7.85□□□□□ -1.15
HMGB1P39-201ENST00000366304 CTAGE6Q86UF2 777 aa7.85□□□□□ -1.15
HMGB1P39-201ENST00000366304 AFAP1L2Q8N4X5 818 aa7.85□□□□□ -1.15
HMGB1P39-201ENST00000366304 TMEM156Q8N614 296 aa7.85□□□□□ -1.15
HMGB1P39-201ENST00000366304 ACTL9Q8TC94 416 aa7.85□□□□□ -1.15
HMGB1P39-201ENST00000366304 ZNF480Q8WV37 535 aa7.85□□□□□ -1.15
HMGB1P39-201ENST00000366304 SKA2Q8WVK7 121 aaPredicted RBP7.85□□□□□ -1.15
HMGB1P39-201ENST00000366304 TMEM158Q8WZ71 300 aa7.85□□□□□ -1.15
HMGB1P39-201ENST00000366304 PIGQQ9BRB3 760 aa7.85□□□□□ -1.15
HMGB1P39-201ENST00000366304 EPB41L4BQ9H329 900 aa7.85□□□□□ -1.15
HMGB1P39-201ENST00000366304 TUBA8Q9NY65 449 aaPredicted RBP7.85□□□□□ -1.15
HMGB1P39-201ENST00000366304 B4GALT7Q9UBV7 327 aa7.85□□□□□ -1.15
HMGB1P39-201ENST00000366304 ADGRE2Q9UHX3 823 aa7.85□□□□□ -1.15
HMGB1P39-201ENST00000366304 FEZ2Q9UHY8 353 aaPredicted RBP7.85□□□□□ -1.15
HMGB1P39-201ENST00000366304 ZNF232Q9UNY5 417 aa7.85□□□□□ -1.15
HMGB1P39-201ENST00000366304 HEATR5BQ9P2D3 2071 aa7.85□□□□□ -1.15
HMGB1P39-201ENST00000366304 SCN3AQ9NY46 2000 aa7.85□□□□□ -1.15
HMGB1P39-201ENST00000366304 TENM1Q9UKZ4 2725 aa7.84□□□□□ -1.15
HMGB1P39-201ENST00000366304 KCNE1BA0A087WTH5 132 aa7.84□□□□□ -1.15
HMGB1P39-201ENST00000366304 TCRBV16S1A1N1A0A5B0 115 aa7.84□□□□□ -1.15
HMGB1P39-201ENST00000366304 HSPB2A8KAH6 182 aa7.84□□□□□ -1.15
HMGB1P39-201ENST00000366304 APOC4-APOC2K7ER74 178 aa7.84□□□□□ -1.15
HMGB1P39-201ENST00000366304 FCHO1O14526 889 aa7.84□□□□□ -1.15
HMGB1P39-201ENST00000366304 OR2J2O76002 312 aa7.84□□□□□ -1.15
HMGB1P39-201ENST00000366304 CNOT4O95628 575 aaKnown RBP7.84□□□□□ -1.15
HMGB1P39-201ENST00000366304 APOC2P02655 101 aa7.84□□□□□ -1.15
HMGB1P39-201ENST00000366304 GYPCP04921 128 aa7.84□□□□□ -1.15
HMGB1P39-201ENST00000366304 PEX19P40855 299 aa7.84□□□□□ -1.15
HMGB1P39-201ENST00000366304 CCNFP41002 786 aa7.84□□□□□ -1.15
HMGB1P39-201ENST00000366304 SOX3P41225 446 aa7.84□□□□□ -1.15
HMGB1P39-201ENST00000366304 GRIA1P42261 906 aa7.84□□□□□ -1.15
HMGB1P39-201ENST00000366304 DNASE1L1P49184 302 aa7.84□□□□□ -1.15
HMGB1P39-201ENST00000366304 MAN2A2P49641 1150 aa7.84□□□□□ -1.15
HMGB1P39-201ENST00000366304 ZBED6P86452 979 aa7.84□□□□□ -1.15
HMGB1P39-201ENST00000366304 ACVR1Q04771 509 aa7.84□□□□□ -1.15
HMGB1P39-201ENST00000366304 KCNJ11Q14654 390 aa7.84□□□□□ -1.15
HMGB1P39-201ENST00000366304 NAA25Q14CX7 972 aa7.84□□□□□ -1.15
HMGB1P39-201ENST00000366304 TMED2Q15363 201 aa7.84□□□□□ -1.15
HMGB1P39-201ENST00000366304 HSPB2Q16082 182 aa7.84□□□□□ -1.15
HMGB1P39-201ENST00000366304 SLC18A3Q16572 532 aa7.84□□□□□ -1.15
HMGB1P39-201ENST00000366304 TTC23LQ6PF05 361 aa7.84□□□□□ -1.15
HMGB1P39-201ENST00000366304 PAOXQ6QHF9 649 aa7.84□□□□□ -1.15
HMGB1P39-201ENST00000366304 IL20RBQ6UXL0 311 aa7.84□□□□□ -1.15
HMGB1P39-201ENST00000366304 ADCK2Q7Z695 626 aa7.84□□□□□ -1.15
HMGB1P39-201ENST00000366304 SLC22A16Q86VW1 577 aa7.84□□□□□ -1.15
HMGB1P39-201ENST00000366304 SLC26A11Q86WA9 606 aa7.84□□□□□ -1.15
HMGB1P39-201ENST00000366304 FAM109AQ8N4B1 249 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms