RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 OR4Q3Q8NH05 313 aa3.52□□□□□ -1.85
RNU4-28P-201ENST00000364739 SLC26A7Q8TE54 656 aa3.52□□□□□ -1.85
RNU4-28P-201ENST00000364739 EXOC4Q96A65 974 aa3.52□□□□□ -1.85
RNU4-28P-201ENST00000364739 C5orf66Q9H5L9 145 aa3.52□□□□□ -1.85
RNU4-28P-201ENST00000364739 SATB2Q9UPW6 733 aa3.52□□□□□ -1.85
RNU4-28P-201ENST00000364739 ANXA2P2A6NMY6 339 aa3.51□□□□□ -1.85
RNU4-28P-201ENST00000364739 A8MU76 341 aa3.51□□□□□ -1.85
RNU4-28P-201ENST00000364739 RNF103O00237 685 aa3.51□□□□□ -1.85
RNU4-28P-201ENST00000364739 PGRMC2O15173 223 aa3.51□□□□□ -1.85
RNU4-28P-201ENST00000364739 FCGR3BO75015 233 aa3.51□□□□□ -1.85
RNU4-28P-201ENST00000364739 MTRF1O75570 445 aaKnown RBP3.51□□□□□ -1.85
RNU4-28P-201ENST00000364739 PRDM1O75626 825 aa3.51□□□□□ -1.85
RNU4-28P-201ENST00000364739 IGKV3-15P01624 115 aa3.51□□□□□ -1.85
RNU4-28P-201ENST00000364739 C9P02748 559 aa3.51□□□□□ -1.85
RNU4-28P-201ENST00000364739 CD1DP15813 335 aa3.51□□□□□ -1.85
RNU4-28P-201ENST00000364739 PRELPP51888 382 aa3.51□□□□□ -1.85
RNU4-28P-201ENST00000364739 UGCGQ16739 394 aa3.51□□□□□ -1.85
RNU4-28P-201ENST00000364739 KNOP1Q1ED39 458 aaKnown RBP3.51□□□□□ -1.85
RNU4-28P-201ENST00000364739 RNF212Q495C1 297 aa3.51□□□□□ -1.85
RNU4-28P-201ENST00000364739 FAM46CQ5VWP2 391 aa3.51□□□□□ -1.85
RNU4-28P-201ENST00000364739 TMEM182Q6ZP80 229 aaPredicted RBP3.51□□□□□ -1.85
RNU4-28P-201ENST00000364739 Q6ZVQ6 151 aa3.51□□□□□ -1.85
RNU4-28P-201ENST00000364739 DNAJB7Q7Z6W7 309 aaPredicted RBP3.51□□□□□ -1.85
RNU4-28P-201ENST00000364739 CATSPER3Q86XQ3 398 aa3.51□□□□□ -1.85
RNU4-28P-201ENST00000364739 CCDC89Q8N998 374 aa3.51□□□□□ -1.85
RNU4-28P-201ENST00000364739 SIPA1Q96FS4 1042 aa3.51□□□□□ -1.85
RNU4-28P-201ENST00000364739 C1orf147Q96MC9 270 aaPredicted RBP3.51□□□□□ -1.85
RNU4-28P-201ENST00000364739 TAAR6Q96RI8 345 aa3.51□□□□□ -1.85
RNU4-28P-201ENST00000364739 DPEP2Q9H4A9 486 aa3.51□□□□□ -1.85
RNU4-28P-201ENST00000364739 C10orf88Q9H8K7 445 aa3.51□□□□□ -1.85
RNU4-28P-201ENST00000364739 RPF1Q9H9Y2 349 aaKnown RBP3.51□□□□□ -1.85
RNU4-28P-201ENST00000364739 NFKBIL1Q9UBC1 381 aaPredicted RBP3.51□□□□□ -1.85
RNU4-28P-201ENST00000364739 ZNF346Q9UL40 294 aaKnown RBP3.51□□□□□ -1.85
RNU4-28P-201ENST00000364739 RNF123Q5XPI4 1314 aa3.5□□□□□ -1.85
RNU4-28P-201ENST00000364739 A0A087WWV3 80 aa3.5□□□□□ -1.85
RNU4-28P-201ENST00000364739 LMO7DNF2Z398 122 aa3.5□□□□□ -1.85
RNU4-28P-201ENST00000364739 K7EQG2 157 aa3.5□□□□□ -1.85
RNU4-28P-201ENST00000364739 OGTO15294 1046 aa3.5□□□□□ -1.85
RNU4-28P-201ENST00000364739 FLRT2O43155 660 aa3.5□□□□□ -1.85
RNU4-28P-201ENST00000364739 TNFSF12O43508 249 aa3.5□□□□□ -1.85
RNU4-28P-201ENST00000364739 GBAP04062 536 aa3.5□□□□□ -1.85
RNU4-28P-201ENST00000364739 SP9P0CG40 484 aa3.5□□□□□ -1.85
RNU4-28P-201ENST00000364739 DNAH10OSP0CZ25 163 aa3.5□□□□□ -1.85
RNU4-28P-201ENST00000364739 GSK3BP49841 420 aa3.5□□□□□ -1.85
RNU4-28P-201ENST00000364739 C9orf66Q5T8R8 295 aa3.5□□□□□ -1.85
RNU4-28P-201ENST00000364739 LEMD1Q68G75 181 aa3.5□□□□□ -1.85
RNU4-28P-201ENST00000364739 MCM10Q7L590 875 aa3.5□□□□□ -1.85
RNU4-28P-201ENST00000364739 CCDC186Q7Z3E2 898 aa3.5□□□□□ -1.85
RNU4-28P-201ENST00000364739 SPATA21Q7Z572 469 aa3.5□□□□□ -1.85
RNU4-28P-201ENST00000364739 CCDC185Q8N715 623 aa3.5□□□□□ -1.85
RNU4-28P-201ENST00000364739 C4orf32Q8N8J7 132 aa3.5□□□□□ -1.85
RNU4-28P-201ENST00000364739 CD99L2Q8TCZ2 262 aa3.5□□□□□ -1.85
RNU4-28P-201ENST00000364739 MGME1Q9BQP7 344 aa3.5□□□□□ -1.85
RNU4-28P-201ENST00000364739 WDR41Q9HAD4 459 aa3.5□□□□□ -1.85
RNU4-28P-201ENST00000364739 EXOC1Q9NV70 894 aa3.5□□□□□ -1.85
RNU4-28P-201ENST00000364739 CLIC5Q9NZA1 410 aa3.5□□□□□ -1.85
RNU4-28P-201ENST00000364739 ZNF107Q9UII5 783 aaPredicted RBP3.5□□□□□ -1.85
RNU4-28P-201ENST00000364739 SALL1Q9NSC2 1324 aa3.49□□□□□ -1.85
RNU4-28P-201ENST00000364739 TRGV8A0A0C4DH27 118 aa3.49□□□□□ -1.85
RNU4-28P-201ENST00000364739 IQCMA0A1B0GVH7 501 aa3.49□□□□□ -1.85
RNU4-28P-201ENST00000364739 NKX6-3A6NJ46 265 aa3.49□□□□□ -1.85
RNU4-28P-201ENST00000364739 PGLSO95336 258 aa3.49□□□□□ -1.85
RNU4-28P-201ENST00000364739 CTNNA2P26232 953 aa3.49□□□□□ -1.85
RNU4-28P-201ENST00000364739 ZNF41P51814 821 aaPredicted RBP3.49□□□□□ -1.85
RNU4-28P-201ENST00000364739 EVCP57679 992 aa3.49□□□□□ -1.85
RNU4-28P-201ENST00000364739 SRPXP78539 464 aa3.49□□□□□ -1.85
RNU4-28P-201ENST00000364739 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.49□□□□□ -1.85
RNU4-28P-201ENST00000364739 MACC1Q6ZN28 852 aa3.49□□□□□ -1.85
RNU4-28P-201ENST00000364739 RPAINQ86UA6 219 aa3.49□□□□□ -1.85
RNU4-28P-201ENST00000364739 MARCH9Q86YJ5 346 aa3.49□□□□□ -1.85
RNU4-28P-201ENST00000364739 KLHL30-AS1Q8NEE0 82 aa3.49□□□□□ -1.85
RNU4-28P-201ENST00000364739 NCOA7Q8NI08 942 aa3.49□□□□□ -1.85
RNU4-28P-201ENST00000364739 GRK7Q8WTQ7 553 aa3.49□□□□□ -1.85
RNU4-28P-201ENST00000364739 C11orf52Q96A22 123 aa3.49□□□□□ -1.85
RNU4-28P-201ENST00000364739 NABP1Q96AH0 204 aa3.49□□□□□ -1.85
RNU4-28P-201ENST00000364739 LURAP1Q96LR2 239 aa3.49□□□□□ -1.85
RNU4-28P-201ENST00000364739 AK8Q96MA6 479 aa3.49□□□□□ -1.85
RNU4-28P-201ENST00000364739 OCR1Q9BZK8 76 aa3.49□□□□□ -1.85
RNU4-28P-201ENST00000364739 LRRCC1Q9C099 1032 aa3.49□□□□□ -1.85
RNU4-28P-201ENST00000364739 FNDC4Q9H6D8 234 aaPredicted RBP3.49□□□□□ -1.85
RNU4-28P-201ENST00000364739 KCNK13Q9HB14 408 aa3.49□□□□□ -1.85
RNU4-28P-201ENST00000364739 MRGBPQ9NV56 204 aa3.49□□□□□ -1.85
RNU4-28P-201ENST00000364739 GMEB2Q9UKD1 530 aa3.49□□□□□ -1.85
RNU4-28P-201ENST00000364739 PCDHGA1Q9Y5H4 931 aa3.49□□□□□ -1.85
RNU4-28P-201ENST00000364739 ZNF732B4DXR9 585 aa3.48□□□□□ -1.85
RNU4-28P-201ENST00000364739 NPIPA3F8WFD2 350 aa3.48□□□□□ -1.85
RNU4-28P-201ENST00000364739 INPP4BO15327 924 aa3.48□□□□□ -1.85
RNU4-28P-201ENST00000364739 ACSL4O60488 711 aa3.48□□□□□ -1.85
RNU4-28P-201ENST00000364739 ZNF354AO60765 605 aaPredicted RBP3.48□□□□□ -1.85
RNU4-28P-201ENST00000364739 MOCS2O96007 188 aaPredicted RBP3.48□□□□□ -1.85
RNU4-28P-201ENST00000364739 KRTAP1-4P0C5Y4 121 aa3.48□□□□□ -1.85
RNU4-28P-201ENST00000364739 FAM58BPP0C7Q3 252 aa3.48□□□□□ -1.85
RNU4-28P-201ENST00000364739 LMO2P25791 158 aa3.48□□□□□ -1.85
RNU4-28P-201ENST00000364739 PIK3R1P27986 724 aa3.48□□□□□ -1.85
RNU4-28P-201ENST00000364739 ACY1Q03154 408 aa3.48□□□□□ -1.85
RNU4-28P-201ENST00000364739 AGAP7PQ5VUJ5 663 aa3.48□□□□□ -1.85
RNU4-28P-201ENST00000364739 FAM91A1Q658Y4 838 aa3.48□□□□□ -1.85
RNU4-28P-201ENST00000364739 TMED8Q6PL24 325 aaPredicted RBP3.48□□□□□ -1.85
RNU4-28P-201ENST00000364739 C17orf107Q6ZR85 190 aa3.48□□□□□ -1.85
RNU4-28P-201ENST00000364739 GPR141Q7Z602 305 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms