RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 VWC2Q2TAL6 325 aa1.05□□□□□ -2.24
RNU6-238P-201ENST00000363313 CBWD6Q4V339 395 aa1.05□□□□□ -2.24
RNU6-238P-201ENST00000363313 CBWD3Q5JTY5 395 aa1.05□□□□□ -2.24
RNU6-238P-201ENST00000363313 SNX30Q5VWJ9 437 aa1.05□□□□□ -2.24
RNU6-238P-201ENST00000363313 Q6ZVQ6 151 aa1.05□□□□□ -2.24
RNU6-238P-201ENST00000363313 NUFIP2Q7Z417 695 aaKnown RBP1.05□□□□□ -2.24
RNU6-238P-201ENST00000363313 LRP11Q86VZ4 500 aa1.05□□□□□ -2.24
RNU6-238P-201ENST00000363313 C14orf178Q8N769 122 aaPredicted RBP1.05□□□□□ -2.24
RNU6-238P-201ENST00000363313 NXPE2Q96DL1 559 aa1.05□□□□□ -2.24
RNU6-238P-201ENST00000363313 RBM18Q96H35 190 aaKnown RBP1.05□□□□□ -2.24
RNU6-238P-201ENST00000363313 SMARCAD1Q9H4L7 1026 aa1.05□□□□□ -2.24
RNU6-238P-201ENST00000363313 PPCSQ9HAB8 311 aa1.05□□□□□ -2.24
RNU6-238P-201ENST00000363313 PGAP2Q9UHJ9 254 aa1.05□□□□□ -2.24
RNU6-238P-201ENST00000363313 NIP7Q9Y221 180 aaKnown RBP eCLIP1.05□□□□□ -2.24
RNU6-238P-201ENST00000363313 FBN3Q75N90 2809 aa1.05□□□□□ -2.24
RNU6-238P-201ENST00000363313 IGKV1D-17A0A075B6S4 117 aa1.04□□□□□ -2.24
RNU6-238P-201ENST00000363313 IGHV3-35A0A0C4DH35 117 aa1.04□□□□□ -2.24
RNU6-238P-201ENST00000363313 A0A1W2PPK0 400 aa1.04□□□□□ -2.24
RNU6-238P-201ENST00000363313 B4DXG7 233 aa1.04□□□□□ -2.24
RNU6-238P-201ENST00000363313 ZNF44P15621 663 aa1.04□□□□□ -2.24
RNU6-238P-201ENST00000363313 PFKFB1P16118 471 aa1.04□□□□□ -2.24
RNU6-238P-201ENST00000363313 ALDH1B1P30837 517 aa1.04□□□□□ -2.24
RNU6-238P-201ENST00000363313 PSMB10P40306 273 aa1.04□□□□□ -2.24
RNU6-238P-201ENST00000363313 PPM1FP49593 454 aaPredicted RBP1.04□□□□□ -2.24
RNU6-238P-201ENST00000363313 P2RY4P51582 365 aa1.04□□□□□ -2.24
RNU6-238P-201ENST00000363313 EFNA3P52797 238 aa1.04□□□□□ -2.24
RNU6-238P-201ENST00000363313 RASGEF1BQ0VAM2 473 aa1.04□□□□□ -2.24
RNU6-238P-201ENST00000363313 GRB14Q14449 540 aa1.04□□□□□ -2.24
RNU6-238P-201ENST00000363313 RAB41Q5JT25 222 aa1.04□□□□□ -2.24
RNU6-238P-201ENST00000363313 PRSS35Q8N3Z0 413 aa1.04□□□□□ -2.24
RNU6-238P-201ENST00000363313 ZNF540Q8NDQ6 660 aa1.04□□□□□ -2.24
RNU6-238P-201ENST00000363313 PCNPQ8WW12 178 aaKnown RBP1.04□□□□□ -2.24
RNU6-238P-201ENST00000363313 ROBO4Q8WZ75 1007 aa1.04□□□□□ -2.24
RNU6-238P-201ENST00000363313 LPGAT1Q92604 370 aa1.04□□□□□ -2.24
RNU6-238P-201ENST00000363313 RCHY1Q96PM5 261 aa1.04□□□□□ -2.24
RNU6-238P-201ENST00000363313 TNFRSF13CQ96RJ3 184 aa1.04□□□□□ -2.24
RNU6-238P-201ENST00000363313 TXNDC16Q9P2K2 825 aa1.04□□□□□ -2.24
RNU6-238P-201ENST00000363313 KIR2DS1A0A191URI9 304 aa1.03□□□□□ -2.24
RNU6-238P-201ENST00000363313 FSD2A1L4K1 749 aa1.03□□□□□ -2.24
RNU6-238P-201ENST00000363313 B4DLN1 442 aa1.03□□□□□ -2.24
RNU6-238P-201ENST00000363313 RTCAO00442 366 aaKnown RBP1.03□□□□□ -2.24
RNU6-238P-201ENST00000363313 PTGESO14684 152 aa1.03□□□□□ -2.24
RNU6-238P-201ENST00000363313 CD4P01730 458 aa1.03□□□□□ -2.24
RNU6-238P-201ENST00000363313 CSN3P07498 182 aa1.03□□□□□ -2.24
RNU6-238P-201ENST00000363313 VDRP11473 427 aa1.03□□□□□ -2.24
RNU6-238P-201ENST00000363313 RPA1P27694 616 aa1.03□□□□□ -2.24
RNU6-238P-201ENST00000363313 MRPL12P52815 198 aaKnown RBP1.03□□□□□ -2.24
RNU6-238P-201ENST00000363313 PAX2Q02962 417 aa1.03□□□□□ -2.24
RNU6-238P-201ENST00000363313 CACNG1Q06432 222 aa1.03□□□□□ -2.24
RNU6-238P-201ENST00000363313 ILF2Q12905 390 aaKnown RBP1.03□□□□□ -2.24
RNU6-238P-201ENST00000363313 EIF4EBP1Q13541 118 aaPredicted RBP1.03□□□□□ -2.24
RNU6-238P-201ENST00000363313 KIR2DS1Q14954 304 aa1.03□□□□□ -2.24
RNU6-238P-201ENST00000363313 ABRAXAS2Q15018 415 aa1.03□□□□□ -2.24
RNU6-238P-201ENST00000363313 RASA2Q15283 850 aa1.03□□□□□ -2.24
RNU6-238P-201ENST00000363313 PLEKHS1Q5SXH7 462 aa1.03□□□□□ -2.24
RNU6-238P-201ENST00000363313 TMEM211Q6ICI0 200 aa1.03□□□□□ -2.24
RNU6-238P-201ENST00000363313 ZNF589Q86UQ0 364 aaPredicted RBP1.03□□□□□ -2.24
RNU6-238P-201ENST00000363313 ZNF595Q8IYB9 648 aa1.03□□□□□ -2.24
RNU6-238P-201ENST00000363313 SLC22A18ASQ8N1D0 253 aa1.03□□□□□ -2.24
RNU6-238P-201ENST00000363313 TEX26Q8N6G2 289 aa1.03□□□□□ -2.24
RNU6-238P-201ENST00000363313 ZNF781Q8N8C0 355 aa1.03□□□□□ -2.24
RNU6-238P-201ENST00000363313 TBCKQ8TEA7 893 aa1.03□□□□□ -2.24
RNU6-238P-201ENST00000363313 SNRNP27Q8WVK2 155 aaKnown RBP1.03□□□□□ -2.24
RNU6-238P-201ENST00000363313 PROX1Q92786 737 aa1.03□□□□□ -2.24
RNU6-238P-201ENST00000363313 NTNG2Q96CW9 530 aa1.03□□□□□ -2.24
RNU6-238P-201ENST00000363313 PGM2Q96G03 612 aa1.03□□□□□ -2.24
RNU6-238P-201ENST00000363313 NEDD4LQ96PU5 975 aa1.03□□□□□ -2.24
RNU6-238P-201ENST00000363313 RSPO3Q9BXY4 272 aaPredicted RBP1.03□□□□□ -2.24
RNU6-238P-201ENST00000363313 ITPAQ9BY32 194 aa1.03□□□□□ -2.24
RNU6-238P-201ENST00000363313 RNF121Q9H920 327 aa1.03□□□□□ -2.24
RNU6-238P-201ENST00000363313 NMUR1Q9HB89 426 aa1.03□□□□□ -2.24
RNU6-238P-201ENST00000363313 SAGE1Q9NXZ1 904 aa1.03□□□□□ -2.24
RNU6-238P-201ENST00000363313 LUZP4Q9P127 313 aa1.03□□□□□ -2.24
RNU6-238P-201ENST00000363313 SUCLA2Q9P2R7 463 aaPredicted RBP1.03□□□□□ -2.24
RNU6-238P-201ENST00000363313 ZNF346Q9UL40 294 aaKnown RBP1.03□□□□□ -2.24
RNU6-238P-201ENST00000363313 HBS1LQ9Y450 684 aaKnown RBP1.03□□□□□ -2.24
RNU6-238P-201ENST00000363313 LOC102723996A0A087X1L8 192 aa1.02□□□□□ -2.25
RNU6-238P-201ENST00000363313 SIGLEC5O15389 551 aa1.02□□□□□ -2.25
RNU6-238P-201ENST00000363313 GPAA1O43292 621 aa1.02□□□□□ -2.25
RNU6-238P-201ENST00000363313 EMC8O43402 210 aa1.02□□□□□ -2.25
RNU6-238P-201ENST00000363313 ZNF324O75467 553 aaPredicted RBP1.02□□□□□ -2.25
RNU6-238P-201ENST00000363313 IGKV1-17P01599 117 aa1.02□□□□□ -2.25
RNU6-238P-201ENST00000363313 F3P13726 295 aa1.02□□□□□ -2.25
RNU6-238P-201ENST00000363313 GARSP41250 739 aaKnown RBP1.02□□□□□ -2.25
RNU6-238P-201ENST00000363313 MATR3P43243 847 aaKnown RBP eCLIP1.02□□□□□ -2.25
RNU6-238P-201ENST00000363313 NDST1P52848 882 aa1.02□□□□□ -2.25
RNU6-238P-201ENST00000363313 EIF5P55010 431 aaKnown RBP1.02□□□□□ -2.25
RNU6-238P-201ENST00000363313 ADARP55265 1226 aaKnown RBP1.02□□□□□ -2.25
RNU6-238P-201ENST00000363313 CDH13P55290 713 aa1.02□□□□□ -2.25
RNU6-238P-201ENST00000363313 IRF3Q14653 427 aa1.02□□□□□ -2.25
RNU6-238P-201ENST00000363313 MPPED2Q15777 294 aa1.02□□□□□ -2.25
RNU6-238P-201ENST00000363313 KPRPQ5T749 579 aaPredicted RBP1.02□□□□□ -2.25
RNU6-238P-201ENST00000363313 CFAP65Q6ZU64 1925 aaKnown RBP1.02□□□□□ -2.25
RNU6-238P-201ENST00000363313 TBC1D10CQ8IV04 446 aa1.02□□□□□ -2.25
RNU6-238P-201ENST00000363313 CPXCR1Q8N123 301 aa1.02□□□□□ -2.25
RNU6-238P-201ENST00000363313 TSPAN14Q8NG11 270 aa1.02□□□□□ -2.25
RNU6-238P-201ENST00000363313 VN1R17PQ8TDU5 208 aa1.02□□□□□ -2.25
RNU6-238P-201ENST00000363313 HDAC2Q92769 488 aaKnown RBP1.02□□□□□ -2.25
RNU6-238P-201ENST00000363313 C16orf74Q96GX8 76 aa1.02□□□□□ -2.25
RNU6-238P-201ENST00000363313 SEC62Q99442 399 aaKnown RBP1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms