RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 MXD1Q05195 221 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 DBPQ10586 325 aaPredicted RBP10.16□□□□□ -0.78
SMC3-201ENST00000361804 TAB1Q15750 504 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 SPOUT1Q5T280 376 aaKnown RBP10.16□□□□□ -0.78
SMC3-201ENST00000361804 RETSATQ6NUM9 610 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 LRRC70Q7Z2Q7 622 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 HSD11B1LQ7Z5J1 315 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 ZNF740Q8NDX6 193 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 OR2AP1Q8NGE2 309 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 ITPKCQ96DU7 683 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 OTUB1Q96FW1 271 aaPredicted RBP10.16□□□□□ -0.78
SMC3-201ENST00000361804 CAPNS2Q96L46 248 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 CEP295NLQ96MC4 621 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 PKP4Q99569 1192 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 SDHCQ99643 169 aaPredicted RBP10.16□□□□□ -0.78
SMC3-201ENST00000361804 PITX2Q99697 317 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 CHST8Q9H2A9 424 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 SPNS1Q9H2V7 528 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 STARD7Q9NQZ5 370 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 ABT1Q9ULW3 272 aaKnown RBP10.16□□□□□ -0.78
SMC3-201ENST00000361804 DUSP12Q9UNI6 340 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 PLXND1Q9Y4D7 1925 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 CLDN24A6NM45 220 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 SCAMP2O15127 329 aaKnown RBP10.16□□□□□ -0.78
SMC3-201ENST00000361804 TSPAN6O43657 245 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 ALOX5P09917 674 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 SERPINA4P29622 427 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 HLA-FP30511 346 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 RGS6P49758 472 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 LSM11P83369 360 aaKnown RBP eCLIP10.16□□□□□ -0.781e-6■■■■□ 24.7
SMC3-201ENST00000361804 MPEG1Q2M385 716 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 TMPRSS11BQ86T26 416 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 WDR48Q8TAF3 677 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 WDR20Q8TBZ3 569 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 SPASTQ9UBP0 616 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 CCL26Q9Y258 94 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 IFT52Q9Y366 437 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 PCDHGA2Q9Y5H1 932 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 DNMT3AQ9Y6K1 912 aaPredicted RBP10.16□□□□□ -0.78
SMC3-201ENST00000361804 TFECO14948 347 aaPredicted RBP10.15□□□□□ -0.78
SMC3-201ENST00000361804 RGS5O15539 181 aa10.15□□□□□ -0.78
SMC3-201ENST00000361804 SGTAO43765 313 aa10.15□□□□□ -0.78
SMC3-201ENST00000361804 DNAJB5O75953 348 aa10.15□□□□□ -0.78
SMC3-201ENST00000361804 OR56A5P0C7T3 313 aa10.15□□□□□ -0.78
SMC3-201ENST00000361804 IL1RNP18510 177 aa10.15□□□□□ -0.78
SMC3-201ENST00000361804 MVDP53602 400 aa10.15□□□□□ -0.78
SMC3-201ENST00000361804 RNF180Q86T96 592 aa10.15□□□□□ -0.78
SMC3-201ENST00000361804 RNF130Q86XS8 419 aa10.15□□□□□ -0.78
SMC3-201ENST00000361804 NPAS3Q8IXF0 933 aa10.15□□□□□ -0.78
SMC3-201ENST00000361804 DOHHQ9BU89 302 aa10.15□□□□□ -0.78
SMC3-201ENST00000361804 BEX2Q9BXY8 128 aa10.15□□□□□ -0.78
SMC3-201ENST00000361804 FBXL12Q9NXK8 326 aa10.15□□□□□ -0.78
SMC3-201ENST00000361804 RAB23Q9ULC3 237 aa10.15□□□□□ -0.78
SMC3-201ENST00000361804 PCM1Q15154 2024 aa10.15□□□□□ -0.78
SMC3-201ENST00000361804 IGSF6O95976 241 aa10.15□□□□□ -0.78
SMC3-201ENST00000361804 ATP1B2P14415 290 aaPredicted RBP10.15□□□□□ -0.78
SMC3-201ENST00000361804 IDSP22304 550 aa10.15□□□□□ -0.78
SMC3-201ENST00000361804 SOAT1P35610 550 aa10.15□□□□□ -0.78
SMC3-201ENST00000361804 GRK3P35626 688 aa10.15□□□□□ -0.78
SMC3-201ENST00000361804 OPRD1P41143 372 aa10.15□□□□□ -0.78
SMC3-201ENST00000361804 CASP3P42574 277 aa10.15□□□□□ -0.78
SMC3-201ENST00000361804 TRPC1P48995 793 aa10.15□□□□□ -0.78
SMC3-201ENST00000361804 RACK1P63244 317 aaKnown RBP10.15□□□□□ -0.78
SMC3-201ENST00000361804 TLE2Q04725 743 aa10.15□□□□□ -0.78
SMC3-201ENST00000361804 TPRG1Q6ZUI0 275 aa10.15□□□□□ -0.78
SMC3-201ENST00000361804 NEK10Q6ZWH5 1172 aa10.15□□□□□ -0.78
SMC3-201ENST00000361804 ZNF605Q86T29 641 aa10.15□□□□□ -0.78
SMC3-201ENST00000361804 NEIL2Q969S2 332 aa10.15□□□□□ -0.78
SMC3-201ENST00000361804 FAM129BQ96TA1 746 aa10.15□□□□□ -0.78
SMC3-201ENST00000361804 CNPPD1Q9BV87 410 aa10.15□□□□□ -0.78
SMC3-201ENST00000361804 IMPAD1Q9NX62 359 aa10.15□□□□□ -0.78
SMC3-201ENST00000361804 DNAJC27Q9NZQ0 273 aa10.15□□□□□ -0.78
SMC3-201ENST00000361804 ITM2BQ9Y287 266 aa10.15□□□□□ -0.78
SMC3-201ENST00000361804 MGAT4DA6NG13 374 aa10.15□□□□□ -0.78
SMC3-201ENST00000361804 TPST2O60704 377 aa10.15□□□□□ -0.78
SMC3-201ENST00000361804 ELP6Q0PNE2 266 aa10.15□□□□□ -0.78
SMC3-201ENST00000361804 SMU1Q2TAY7 513 aa10.15□□□□□ -0.78
SMC3-201ENST00000361804 BCL7AQ4VC05 210 aa10.15□□□□□ -0.78
SMC3-201ENST00000361804 DEPDC1Q5TB30 811 aa10.15□□□□□ -0.78
SMC3-201ENST00000361804 AGTRAPQ6RW13 159 aa10.15□□□□□ -0.78
SMC3-201ENST00000361804 RBM45Q8IUH3 476 aaKnown RBP10.15□□□□□ -0.78
SMC3-201ENST00000361804 OR8H2Q8N162 312 aa10.15□□□□□ -0.78
SMC3-201ENST00000361804 SCAIQ8N9R8 606 aa10.15□□□□□ -0.78
SMC3-201ENST00000361804 ZNF461Q8TAF7 563 aa10.15□□□□□ -0.78
SMC3-201ENST00000361804 CSGALNACT1Q8TDX6 532 aa10.15□□□□□ -0.78
SMC3-201ENST00000361804 SCRN2Q96FV2 425 aa10.15□□□□□ -0.78
SMC3-201ENST00000361804 CDK5RAP1Q96SZ6 601 aaKnown RBP10.15□□□□□ -0.78
SMC3-201ENST00000361804 HOXD1Q9GZZ0 328 aa10.15□□□□□ -0.78
SMC3-201ENST00000361804 ABCG4Q9H172 646 aa10.15□□□□□ -0.78
SMC3-201ENST00000361804 ADPRHL2Q9NX46 363 aa10.15□□□□□ -0.78
SMC3-201ENST00000361804 FADS2P1A8MWK0 482 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 GASTP01350 101 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 RPLP0P05388 317 aaKnown RBP10.14□□□□□ -0.79
SMC3-201ENST00000361804 FHP07954 510 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 GABRR2P28476 465 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 MAPK1P28482 360 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 FADDQ13158 208 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 PTGES3Q15185 160 aaKnown RBP10.14□□□□□ -0.79
SMC3-201ENST00000361804 DUSP7Q16829 419 aa10.14□□□□□ -0.79
SMC3-201ENST00000361804 SLC5A12Q1EHB4 618 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms